RNA–Protein interactions for RNA: ENST00000351487.5

UPF3A-201, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

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Gene UPF3A, Length 2,235 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-201ENST00000351487 PRR25Q96S07 402 aa17.2■□□□□ 0.34
UPF3A-201ENST00000351487 ECSCRQ19T08 205 aa17.19■□□□□ 0.34
UPF3A-201ENST00000351487 PRORYQ9H606 182 aa17.19■□□□□ 0.34
UPF3A-201ENST00000351487 ZFAND3Q9H8U3 227 aa17.19■□□□□ 0.34
UPF3A-201ENST00000351487 TMEM189A5PLL7 270 aa17.19■□□□□ 0.34
UPF3A-201ENST00000351487 SYS1-DBNDD2H3BUS1 97 aa17.19■□□□□ 0.34
UPF3A-201ENST00000351487 IGHG4P01861 327 aa17.19■□□□□ 0.34
UPF3A-201ENST00000351487 GPR183P32249 361 aa17.19■□□□□ 0.34
UPF3A-201ENST00000351487 Q6ZN92 141 aa17.19■□□□□ 0.34
UPF3A-201ENST00000351487 RAB9AP51151 201 aa17.18■□□□□ 0.34
UPF3A-201ENST00000351487 RHOGP84095 191 aa17.18■□□□□ 0.34
UPF3A-201ENST00000351487 RELQ04864 619 aaPredicted RBP17.18■□□□□ 0.34
UPF3A-201ENST00000351487 HNRNPA3P51991 378 aaKnown RBP17.17■□□□□ 0.34
UPF3A-201ENST00000351487 A0A087X0K7 114 aa17.17■□□□□ 0.34
UPF3A-201ENST00000351487 CENPVL3A0A0U1RRI6 287 aa17.17■□□□□ 0.34
UPF3A-201ENST00000351487 NPFFO15130 113 aa17.17■□□□□ 0.34
UPF3A-201ENST00000351487 LINC00173Q6ZV60 143 aa17.16■□□□□ 0.34
UPF3A-201ENST00000351487 TPPP3Q9BW30 176 aa17.16■□□□□ 0.34
UPF3A-201ENST00000351487 IGLL1P15814 213 aa17.16■□□□□ 0.34
UPF3A-201ENST00000351487 LYZL1Q6UWQ5 148 aa17.16■□□□□ 0.34
UPF3A-201ENST00000351487 PIP4P2Q8N4L2 257 aa17.16■□□□□ 0.34
UPF3A-201ENST00000351487 C19orf84I3L1E1 186 aa17.15■□□□□ 0.34
UPF3A-201ENST00000351487 ZNF138P52744 262 aa17.15■□□□□ 0.34
UPF3A-201ENST00000351487 CCDC140Q96MF4 163 aa17.15■□□□□ 0.34
UPF3A-201ENST00000351487 OR4C46A6NHA9 309 aa17.15■□□□□ 0.34
UPF3A-201ENST00000351487 BUB3O43684 328 aa17.15■□□□□ 0.34
UPF3A-201ENST00000351487 CLEC3BP05452 202 aa17.15■□□□□ 0.34
UPF3A-201ENST00000351487 VGLL1Q99990 258 aa17.15■□□□□ 0.34
UPF3A-201ENST00000351487 IGHV3-35A0A0C4DH35 117 aa17.14■□□□□ 0.33
UPF3A-201ENST00000351487 TSPOP30536 169 aa17.14■□□□□ 0.33
UPF3A-201ENST00000351487 UQCRFS1P47985 274 aa17.14■□□□□ 0.33
UPF3A-201ENST00000351487 RPS20P60866 119 aaKnown RBP17.14■□□□□ 0.33
UPF3A-201ENST00000351487 MRPS16Q9Y3D3 137 aaKnown RBP17.14■□□□□ 0.33
UPF3A-201ENST00000351487 IGHV3OR16-8A0A075B7F1 116 aa17.13■□□□□ 0.33
UPF3A-201ENST00000351487 BMI1P35226 326 aa17.13■□□□□ 0.33
UPF3A-201ENST00000351487 SRSF2Q01130 221 aaKnown RBP17.13■□□□□ 0.33
UPF3A-201ENST00000351487 BATFQ16520 125 aa17.13■□□□□ 0.33
UPF3A-201ENST00000351487 COL5A1-AS1Q5SY13 56 aa17.13■□□□□ 0.33
UPF3A-201ENST00000351487 C5orf56Q8N8D9 126 aa17.13■□□□□ 0.33
UPF3A-201ENST00000351487 Q8TAT8 98 aa17.13■□□□□ 0.33
UPF3A-201ENST00000351487 AP5S1Q9NUS5 200 aa17.13■□□□□ 0.33
UPF3A-201ENST00000351487 HSPB8Q9UJY1 196 aa17.13■□□□□ 0.33
UPF3A-201ENST00000351487 LAMTOR2Q9Y2Q5 125 aa17.13■□□□□ 0.33
UPF3A-201ENST00000351487 U3KQK5 164 aa17.13■□□□□ 0.33
UPF3A-201ENST00000351487 GOSR1O95249 250 aa17.13■□□□□ 0.33
UPF3A-201ENST00000351487 HLA-DMBP28068 263 aa17.13■□□□□ 0.33
UPF3A-201ENST00000351487 TMSB15BA0A087X1C1 80 aa17.12■□□□□ 0.33
UPF3A-201ENST00000351487 CLPSL1A2RUU4 121 aa17.12■□□□□ 0.33
UPF3A-201ENST00000351487 CSN3P07498 182 aa17.12■□□□□ 0.33
UPF3A-201ENST00000351487 PET117Q6UWS5 81 aa17.12■□□□□ 0.33
UPF3A-201ENST00000351487 MAP1LC3CQ9BXW4 147 aa17.12■□□□□ 0.33
UPF3A-201ENST00000351487 NCOR2Q9Y618 2525 aa17.12■□□□□ 0.33
UPF3A-201ENST00000351487 G3V318 75 aa17.12■□□□□ 0.33
UPF3A-201ENST00000351487 ZNF80P51504 273 aaPredicted RBP17.12■□□□□ 0.33
UPF3A-201ENST00000351487 FAM104BQ5XKR9 115 aa17.12■□□□□ 0.33
UPF3A-201ENST00000351487 IGFL4Q6B9Z1 124 aa17.12■□□□□ 0.33
UPF3A-201ENST00000351487 TMEM213A2RRL7 107 aa17.11■□□□□ 0.33
UPF3A-201ENST00000351487 EEF1AKMT3Q96AZ1 226 aa17.11■□□□□ 0.33
UPF3A-201ENST00000351487 TMEM191AQ9H0A3 160 aa17.11■□□□□ 0.33
UPF3A-201ENST00000351487 TRBV7-1A0A0A6YYK4 115 aa17.11■□□□□ 0.33
UPF3A-201ENST00000351487 RBAKDNA6NC62 111 aa17.11■□□□□ 0.33
UPF3A-201ENST00000351487 LINC01548A6NM66 108 aa17.11■□□□□ 0.33
UPF3A-201ENST00000351487 IGLC6P0CF74 106 aa17.11■□□□□ 0.33
UPF3A-201ENST00000351487 ZNF25P17030 456 aaPredicted RBP17.11■□□□□ 0.33
UPF3A-201ENST00000351487 SLC50A1Q9BRV3 221 aa17.11■□□□□ 0.33
UPF3A-201ENST00000351487 ST20Q9HBF5 79 aa17.11■□□□□ 0.33
UPF3A-201ENST00000351487 IGHV4-39P01824 125 aa17.1■□□□□ 0.33
UPF3A-201ENST00000351487 GNLYP22749 145 aa17.1■□□□□ 0.33
UPF3A-201ENST00000351487 CLEC19AQ6UXS0 136 aa17.1■□□□□ 0.33
UPF3A-201ENST00000351487 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa17.1■□□□□ 0.33
UPF3A-201ENST00000351487 CHD8Q9HCK8 2581 aa17.1■□□□□ 0.33
UPF3A-201ENST00000351487 G0S2P27469 103 aa17.09■□□□□ 0.33
UPF3A-201ENST00000351487 FA2HQ7L5A8 372 aa17.09■□□□□ 0.33
UPF3A-201ENST00000351487 FER1L6-AS1Q8NA97 138 aa17.09■□□□□ 0.33
UPF3A-201ENST00000351487 PSMG3-AS1Q96PY0 264 aa17.09■□□□□ 0.33
UPF3A-201ENST00000351487 CSMD1Q96PZ7 3565 aa17.09■□□□□ 0.33
UPF3A-201ENST00000351487 PAX8Q06710 450 aa17.09■□□□□ 0.33
UPF3A-201ENST00000351487 ZNF575Q86XF7 245 aa17.09■□□□□ 0.33
UPF3A-201ENST00000351487 TMEM208Q9BTX3 173 aa17.09■□□□□ 0.33
UPF3A-201ENST00000351487 ABCA2Q9BZC7 2435 aa17.08■□□□□ 0.33
UPF3A-201ENST00000351487 D6R8Y8 96 aa17.08■□□□□ 0.33
UPF3A-201ENST00000351487 AMN1Q8IY45 258 aa17.08■□□□□ 0.33
UPF3A-201ENST00000351487 PRSS3P2Q8NHM4 247 aa17.08■□□□□ 0.33
UPF3A-201ENST00000351487 ATP6V0BQ99437 205 aa17.08■□□□□ 0.33
UPF3A-201ENST00000351487 GAGE1Q13065 139 aa17.08■□□□□ 0.32
UPF3A-201ENST00000351487 C19orf54Q5BKX5 351 aa17.08■□□□□ 0.32
UPF3A-201ENST00000351487 ORMDL3Q8N138 153 aa17.08■□□□□ 0.32
UPF3A-201ENST00000351487 MOB4Q9Y3A3 225 aa17.08■□□□□ 0.32
UPF3A-201ENST00000351487 OR10AG1Q8NH19 301 aa17.07■□□□□ 0.32
UPF3A-201ENST00000351487 CNFNQ9BYD5 112 aa17.07■□□□□ 0.32
UPF3A-201ENST00000351487 AKAP6Q13023 2319 aa17.07■□□□□ 0.32
UPF3A-201ENST00000351487 DLEU1O43261 78 aa17.06■□□□□ 0.32
UPF3A-201ENST00000351487 CRIP2P52943 208 aaPredicted RBP17.06■□□□□ 0.32
UPF3A-201ENST00000351487 LINC01545Q5VT33 79 aa17.06■□□□□ 0.32
UPF3A-201ENST00000351487 STPG4Q8N801 248 aa17.06■□□□□ 0.32
UPF3A-201ENST00000351487 ZNF747Q9BV97 191 aa17.06■□□□□ 0.32
UPF3A-201ENST00000351487 CACNA1BQ00975 2339 aa17.06■□□□□ 0.32
UPF3A-201ENST00000351487 PRELID3AQ96N28 172 aa17.06■□□□□ 0.32
UPF3A-201ENST00000351487 FABP5P3A8MUU1 101 aa17.05■□□□□ 0.32
UPF3A-201ENST00000351487 PRAC2D3DTV9 90 aa17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 61.1 ms