RNA–Protein interactions for RNA: ENST00000347849.7

PTPN18-202, Transcript of protein tyrosine phosphatase, non-receptor type 18, humanhuman

TSL 1 (best) BASIC

Gene PTPN18, Length 2,472 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18-202ENST00000347849 NDPQ00604 133 aa16.71■□□□□ 0.26
PTPN18-202ENST00000347849 GOLT1AQ6ZVE7 132 aa16.71■□□□□ 0.26
PTPN18-202ENST00000347849 ASCL2Q99929 193 aa16.71■□□□□ 0.26
PTPN18-202ENST00000347849 ABCA2Q9BZC7 2435 aa16.71■□□□□ 0.26
PTPN18-202ENST00000347849 HAX1O00165 279 aa16.7■□□□□ 0.26
PTPN18-202ENST00000347849 LYZP61626 148 aa16.7■□□□□ 0.26
PTPN18-202ENST00000347849 RHOGP84095 191 aa16.7■□□□□ 0.26
PTPN18-202ENST00000347849 C5orf64Q2M2E5 130 aa16.7■□□□□ 0.26
PTPN18-202ENST00000347849 AMMECR1LQ6DCA0 310 aa16.7■□□□□ 0.26
PTPN18-202ENST00000347849 Q86TA4 180 aa16.7■□□□□ 0.26
PTPN18-202ENST00000347849 FAM231BA6NCW3 169 aa16.7■□□□□ 0.26
PTPN18-202ENST00000347849 NCBP2LA6PVI3 153 aaKnown RBP16.7■□□□□ 0.26
PTPN18-202ENST00000347849 NPIPB6E9PJ23 425 aa16.7■□□□□ 0.26
PTPN18-202ENST00000347849 I3L2K1 104 aa16.7■□□□□ 0.26
PTPN18-202ENST00000347849 APOHP02749 345 aaPredicted RBP16.7■□□□□ 0.26
PTPN18-202ENST00000347849 SAPCD1Q5SSQ6 148 aa16.7■□□□□ 0.26
PTPN18-202ENST00000347849 NRGNQ92686 78 aa16.7■□□□□ 0.26
PTPN18-202ENST00000347849 HSPB8Q9UJY1 196 aa16.7■□□□□ 0.26
PTPN18-202ENST00000347849 PSG1P11464 419 aa16.69■□□□□ 0.26
PTPN18-202ENST00000347849 HIGD1AQ9Y241 93 aa16.69■□□□□ 0.26
PTPN18-202ENST00000347849 S4R3C0 116 aa16.69■□□□□ 0.26
PTPN18-202ENST00000347849 HLA-DRB1P01911 266 aa16.69■□□□□ 0.26
PTPN18-202ENST00000347849 Q8N6K4 173 aa16.69■□□□□ 0.26
PTPN18-202ENST00000347849 CCL19Q99731 98 aa16.69■□□□□ 0.26
PTPN18-202ENST00000347849 EPG5Q9HCE0 2579 aa16.68■□□□□ 0.26
PTPN18-202ENST00000347849 IGHV4-61A0A0C4DH41 118 aa16.68■□□□□ 0.26
PTPN18-202ENST00000347849 SNAI2O43623 268 aa16.68■□□□□ 0.26
PTPN18-202ENST00000347849 IGLV2-11P01706 119 aa16.68■□□□□ 0.26
PTPN18-202ENST00000347849 PIP4P2Q8N4L2 257 aa16.68■□□□□ 0.26
PTPN18-202ENST00000347849 OTORQ9NRC9 128 aa16.68■□□□□ 0.26
PTPN18-202ENST00000347849 FBN2P35556 2912 aa16.68■□□□□ 0.26
PTPN18-202ENST00000347849 ARMS2P0C7Q2 107 aa16.67■□□□□ 0.26
PTPN18-202ENST00000347849 SAA4P35542 130 aa16.67■□□□□ 0.26
PTPN18-202ENST00000347849 MINOS1Q5TGZ0 78 aa16.67■□□□□ 0.26
PTPN18-202ENST00000347849 MS4A6AQ9H2W1 248 aa16.67■□□□□ 0.26
PTPN18-202ENST00000347849 MINOS1-NBL1R4GNA1 71 aa16.67■□□□□ 0.26
PTPN18-202ENST00000347849 K7EIM0 57 aa16.67■□□□□ 0.26
PTPN18-202ENST00000347849 FOXE3Q13461 319 aa16.67■□□□□ 0.26
PTPN18-202ENST00000347849 CCDC144NLQ6NUI1 221 aa16.67■□□□□ 0.26
PTPN18-202ENST00000347849 SPOCK3Q9BQ16 436 aa16.67■□□□□ 0.26
PTPN18-202ENST00000347849 IGHV3OR16-10A0A075B7F0 116 aa16.66■□□□□ 0.26
PTPN18-202ENST00000347849 A0A1B0GUT8 65 aa16.66■□□□□ 0.26
PTPN18-202ENST00000347849 ZNF785A8K8V0 405 aa16.66■□□□□ 0.26
PTPN18-202ENST00000347849 UBE2E1P51965 193 aa16.66■□□□□ 0.26
PTPN18-202ENST00000347849 PLP1P60201 277 aa16.66■□□□□ 0.26
PTPN18-202ENST00000347849 COTL1Q14019 142 aa16.66■□□□□ 0.26
PTPN18-202ENST00000347849 SLC25A39Q9BZJ4 359 aaPredicted RBP16.66■□□□□ 0.26
PTPN18-202ENST00000347849 IGLC1P0CG04 106 aa16.65■□□□□ 0.26
PTPN18-202ENST00000347849 CST9LQ9H4G1 147 aa16.65■□□□□ 0.26
PTPN18-202ENST00000347849 AP5S1Q9NUS5 200 aa16.65■□□□□ 0.26
PTPN18-202ENST00000347849 TMEM11P17152 192 aa16.65■□□□□ 0.26
PTPN18-202ENST00000347849 LINC01545Q5VT33 79 aa16.65■□□□□ 0.26
PTPN18-202ENST00000347849 ZC2HC1AQ96GY0 325 aa16.65■□□□□ 0.26
PTPN18-202ENST00000347849 TPPP3Q9BW30 176 aa16.65■□□□□ 0.26
PTPN18-202ENST00000347849 GPR183P32249 361 aa16.64■□□□□ 0.26
PTPN18-202ENST00000347849 HIST1H1AQ02539 215 aaPredicted RBP16.64■□□□□ 0.26
PTPN18-202ENST00000347849 EBI3Q14213 229 aa16.64■□□□□ 0.26
PTPN18-202ENST00000347849 C17orf77Q96MU5 243 aa16.64■□□□□ 0.26
PTPN18-202ENST00000347849 CD5LO43866 347 aa16.64■□□□□ 0.25
PTPN18-202ENST00000347849 PSG9Q00887 426 aa16.64■□□□□ 0.25
PTPN18-202ENST00000347849 PRSS3P2Q8NHM4 247 aa16.64■□□□□ 0.25
PTPN18-202ENST00000347849 NCR2O95944 276 aa16.63■□□□□ 0.25
PTPN18-202ENST00000347849 ZNF562Q6V9R5 426 aa16.63■□□□□ 0.25
PTPN18-202ENST00000347849 ZNF747Q9BV97 191 aa16.63■□□□□ 0.25
PTPN18-202ENST00000347849 IGKV1-17P01599 117 aa16.63■□□□□ 0.25
PTPN18-202ENST00000347849 FAM208BQ5VWN6 2430 aa16.63■□□□□ 0.25
PTPN18-202ENST00000347849 LRRK2Q5S007 2527 aa16.62■□□□□ 0.25
PTPN18-202ENST00000347849 IGHV4-30-2A0A087WSY4 118 aa16.62■□□□□ 0.25
PTPN18-202ENST00000347849 CENPVL3A0A0U1RRI6 287 aa16.62■□□□□ 0.25
PTPN18-202ENST00000347849 OOSP1A8MZH6 123 aa16.62■□□□□ 0.25
PTPN18-202ENST00000347849 RIGQ13278 110 aa16.62■□□□□ 0.25
PTPN18-202ENST00000347849 C16orf54Q6UWD8 224 aa16.62■□□□□ 0.25
PTPN18-202ENST00000347849 ARPC1AQ92747 370 aa16.62■□□□□ 0.25
PTPN18-202ENST00000347849 FANCD2OSQ96PS1 177 aa16.62■□□□□ 0.25
PTPN18-202ENST00000347849 CENPEQ02224 2701 aa16.62■□□□□ 0.25
PTPN18-202ENST00000347849 TRAV8-6A0A0B4J262 113 aa16.62■□□□□ 0.25
PTPN18-202ENST00000347849 EGR2P11161 476 aaPredicted RBP16.62■□□□□ 0.25
PTPN18-202ENST00000347849 ATP5J2P56134 94 aa16.62■□□□□ 0.25
PTPN18-202ENST00000347849 SRSF1Q07955 248 aaKnown RBP eCLIP16.62■□□□□ 0.252e-7■□□□□ 9.5
PTPN18-202ENST00000347849 OCIAD2Q56VL3 154 aa16.62■□□□□ 0.25
PTPN18-202ENST00000347849 Q8N9W7 124 aa16.62■□□□□ 0.25
PTPN18-202ENST00000347849 C10orf105Q8TEF2 133 aa16.62■□□□□ 0.25
PTPN18-202ENST00000347849 SRSF8Q9BRL6 282 aaKnown RBP16.62■□□□□ 0.25
PTPN18-202ENST00000347849 FAM106CPP0CH98 169 aa16.61■□□□□ 0.25
PTPN18-202ENST00000347849 COX8AP10176 69 aa16.61■□□□□ 0.25
PTPN18-202ENST00000347849 FAM106AQ4KMX7 169 aa16.61■□□□□ 0.25
PTPN18-202ENST00000347849 FA2HQ7L5A8 372 aa16.61■□□□□ 0.25
PTPN18-202ENST00000347849 RASL11BQ9BPW5 248 aa16.61■□□□□ 0.25
PTPN18-202ENST00000347849 VPS25Q9BRG1 176 aa16.61■□□□□ 0.25
PTPN18-202ENST00000347849 TMEM14CQ9P0S9 112 aa16.61■□□□□ 0.25
PTPN18-202ENST00000347849 IGHV7-81A0A0B4J1V7 117 aa16.6■□□□□ 0.25
PTPN18-202ENST00000347849 C2orf91Q6ZV80 131 aa16.6■□□□□ 0.25
PTPN18-202ENST00000347849 BPIFA4PQ86YQ2 179 aa16.6■□□□□ 0.25
PTPN18-202ENST00000347849 ZNF843Q8N446 348 aa16.6■□□□□ 0.25
PTPN18-202ENST00000347849 UBR5O95071 2799 aaPredicted RBP16.6■□□□□ 0.25
PTPN18-202ENST00000347849 NPFFO15130 113 aa16.6■□□□□ 0.25
PTPN18-202ENST00000347849 CSN1S1P47710 185 aa16.6■□□□□ 0.25
PTPN18-202ENST00000347849 OR10AG1Q8NH19 301 aa16.6■□□□□ 0.25
PTPN18-202ENST00000347849 PIMREGQ9BSJ6 248 aa16.6■□□□□ 0.25
PTPN18-202ENST00000347849 LOC389332A0A1B0GUA5 103 aa16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms