RNA–Protein interactions for RNA: ENST00000338888.3

RUNX3-202, Transcript of runt related transcription factor 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RUNX3, Length 2,629 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUNX3-202ENST00000338888 SH2D1AO60880 128 aa16.03■□□□□ 0.16
RUNX3-202ENST00000338888 DEFB109BQ30KR1 87 aa16.03■□□□□ 0.16
RUNX3-202ENST00000338888 SH2D6Q7Z4S9 175 aa16.03■□□□□ 0.16
RUNX3-202ENST00000338888 GTSCR1Q86UQ5 136 aa16.03■□□□□ 0.16
RUNX3-202ENST00000338888 TRBV25-1A0A075B6N4 114 aa16.02■□□□□ 0.16
RUNX3-202ENST00000338888 IGKV1-17P01599 117 aa16.02■□□□□ 0.16
RUNX3-202ENST00000338888 PRSS1P07477 247 aa16.02■□□□□ 0.16
RUNX3-202ENST00000338888 Q5PR19 223 aa16.02■□□□□ 0.16
RUNX3-202ENST00000338888 SHANK2-AS3Q9BTD1 123 aa16.02■□□□□ 0.16
RUNX3-202ENST00000338888 SMPXQ9UHP9 88 aa16.02■□□□□ 0.16
RUNX3-202ENST00000338888 ODF1Q14990 250 aa16.02■□□□□ 0.15
RUNX3-202ENST00000338888 CUL9Q8IWT3 2517 aa16.02■□□□□ 0.15
RUNX3-202ENST00000338888 A0A1B0GV72 72 aa16.01■□□□□ 0.15
RUNX3-202ENST00000338888 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP16.01■□□□□ 0.15
RUNX3-202ENST00000338888 PRB3Q04118 309 aaPredicted RBP16.01■□□□□ 0.15
RUNX3-202ENST00000338888 ATP6V0BQ99437 205 aa16.01■□□□□ 0.15
RUNX3-202ENST00000338888 NDUFS8O00217 210 aa16.01■□□□□ 0.15
RUNX3-202ENST00000338888 GAS8-AS1O95177 125 aa16.01■□□□□ 0.15
RUNX3-202ENST00000338888 LEPP41159 167 aa16.01■□□□□ 0.15
RUNX3-202ENST00000338888 ETDBQ3ZM63 59 aa16.01■□□□□ 0.15
RUNX3-202ENST00000338888 LYPD2Q6UXB3 125 aa16.01■□□□□ 0.15
RUNX3-202ENST00000338888 C22orf34Q6ZV56 151 aa16.01■□□□□ 0.15
RUNX3-202ENST00000338888 LINC00311Q8N616 119 aa16.01■□□□□ 0.15
RUNX3-202ENST00000338888 SIGLEC9Q9Y336 463 aa16.01■□□□□ 0.15
RUNX3-202ENST00000338888 ROS1P08922 2347 aa16.01■□□□□ 0.15
RUNX3-202ENST00000338888 H3BMG7 143 aa16■□□□□ 0.15
RUNX3-202ENST00000338888 BMI1P35226 326 aa16■□□□□ 0.15
RUNX3-202ENST00000338888 DLX1P56177 255 aa16■□□□□ 0.15
RUNX3-202ENST00000338888 CCDC144NLQ6NUI1 221 aa16■□□□□ 0.15
RUNX3-202ENST00000338888 CEND1Q8N111 149 aa16■□□□□ 0.15
RUNX3-202ENST00000338888 ARPC1AQ92747 370 aa16■□□□□ 0.15
RUNX3-202ENST00000338888 TEX22C9J3V5 150 aa16■□□□□ 0.15
RUNX3-202ENST00000338888 I3L2K1 104 aa16■□□□□ 0.15
RUNX3-202ENST00000338888 TMEM108Q6UXF1 575 aa16■□□□□ 0.15
RUNX3-202ENST00000338888 MTURNQ8N3F0 131 aa16■□□□□ 0.15
RUNX3-202ENST00000338888 PIFOQ8TCI5 191 aa16■□□□□ 0.15
RUNX3-202ENST00000338888 SPAG8Q99932 426 aaPredicted RBP16■□□□□ 0.15
RUNX3-202ENST00000338888 IGLL5B9A064 214 aa15.99■□□□□ 0.15
RUNX3-202ENST00000338888 E9PLD3 99 aa15.99■□□□□ 0.15
RUNX3-202ENST00000338888 F8W1H4 67 aa15.99■□□□□ 0.15
RUNX3-202ENST00000338888 H3BRN7 92 aa15.99■□□□□ 0.15
RUNX3-202ENST00000338888 FOXI2Q6ZQN5 318 aa15.99■□□□□ 0.15
RUNX3-202ENST00000338888 MSRB1Q9NZV6 116 aa15.99■□□□□ 0.15
RUNX3-202ENST00000338888 MGAQ8IWI9 3026 aa15.99■□□□□ 0.15
RUNX3-202ENST00000338888 C16orf97H3BN30 126 aa15.99■□□□□ 0.15
RUNX3-202ENST00000338888 J3QR89 54 aa15.99■□□□□ 0.15
RUNX3-202ENST00000338888 K7EM74 188 aa15.99■□□□□ 0.15
RUNX3-202ENST00000338888 AMTNQ6UX39 209 aa15.99■□□□□ 0.15
RUNX3-202ENST00000338888 LYPD1Q8N2G4 141 aa15.99■□□□□ 0.15
RUNX3-202ENST00000338888 ZMAT4Q9H898 229 aa15.99■□□□□ 0.15
RUNX3-202ENST00000338888 IGKCP01834 107 aa15.98■□□□□ 0.15
RUNX3-202ENST00000338888 NBL1P41271 181 aa15.98■□□□□ 0.15
RUNX3-202ENST00000338888 ZC2HC1BQ5TFG8 222 aa15.98■□□□□ 0.15
RUNX3-202ENST00000338888 CRYGBP07316 175 aa15.98■□□□□ 0.15
RUNX3-202ENST00000338888 EGR2P11161 476 aaPredicted RBP15.98■□□□□ 0.15
RUNX3-202ENST00000338888 FOXC2Q99958 501 aa15.98■□□□□ 0.15
RUNX3-202ENST00000338888 TM2D2Q9BX73 214 aa15.98■□□□□ 0.15
RUNX3-202ENST00000338888 MAP1LC3AQ9H492 121 aa15.98■□□□□ 0.15
RUNX3-202ENST00000338888 IL4P05112 153 aa15.98■□□□□ 0.15
RUNX3-202ENST00000338888 PPP1R27Q86WC6 154 aa15.98■□□□□ 0.15
RUNX3-202ENST00000338888 ZNF479Q96JC4 524 aa15.98■□□□□ 0.15
RUNX3-202ENST00000338888 FBXL15Q9H469 300 aa15.98■□□□□ 0.15
RUNX3-202ENST00000338888 NDUFB3O43676 98 aa15.97■□□□□ 0.15
RUNX3-202ENST00000338888 EVI2AP22794 236 aa15.97■□□□□ 0.15
RUNX3-202ENST00000338888 ZNF491Q8N8L2 437 aa15.97■□□□□ 0.15
RUNX3-202ENST00000338888 SPATA25Q9BR10 227 aa15.97■□□□□ 0.15
RUNX3-202ENST00000338888 IGKV2-40A0A087WW87 121 aaPredicted RBP15.96■□□□□ 0.15
RUNX3-202ENST00000338888 MRPS12O15235 138 aaKnown RBP15.96■□□□□ 0.15
RUNX3-202ENST00000338888 IGKV2D-40P01614 121 aaPredicted RBP15.96■□□□□ 0.15
RUNX3-202ENST00000338888 FCER1GP30273 86 aa15.96■□□□□ 0.15
RUNX3-202ENST00000338888 CCL17Q92583 94 aa15.96■□□□□ 0.15
RUNX3-202ENST00000338888 AAMDCQ9H7C9 122 aa15.96■□□□□ 0.15
RUNX3-202ENST00000338888 S4R3C0 116 aa15.96■□□□□ 0.15
RUNX3-202ENST00000338888 RAB9AP51151 201 aa15.96■□□□□ 0.14
RUNX3-202ENST00000338888 C8orf31Q8N9H6 132 aa15.96■□□□□ 0.14
RUNX3-202ENST00000338888 RNF125Q96EQ8 232 aa15.96■□□□□ 0.14
RUNX3-202ENST00000338888 TMEM160Q9NX00 188 aa15.96■□□□□ 0.14
RUNX3-202ENST00000338888 NPIPB5A8MRT5 1133 aa15.95■□□□□ 0.14
RUNX3-202ENST00000338888 INSL3P51460 131 aa15.95■□□□□ 0.14
RUNX3-202ENST00000338888 MAPKAPK5-AS1Q8N8E1 139 aa15.95■□□□□ 0.14
RUNX3-202ENST00000338888 RNF185Q96GF1 192 aa15.95■□□□□ 0.14
RUNX3-202ENST00000338888 TMEM8BA6NDV4 472 aa15.95■□□□□ 0.14
RUNX3-202ENST00000338888 SHISA9B4DS77 424 aa15.94■□□□□ 0.14
RUNX3-202ENST00000338888 IGHV1-8P0DP01 117 aa15.94■□□□□ 0.14
RUNX3-202ENST00000338888 ZNF80P51504 273 aaPredicted RBP15.94■□□□□ 0.14
RUNX3-202ENST00000338888 ATP5G2Q06055 141 aa15.94■□□□□ 0.14
RUNX3-202ENST00000338888 ASCL5Q7RTU5 278 aa15.94■□□□□ 0.14
RUNX3-202ENST00000338888 Q8TAT8 98 aa15.94■□□□□ 0.14
RUNX3-202ENST00000338888 CTSZQ9UBR2 303 aa15.94■□□□□ 0.14
RUNX3-202ENST00000338888 MBD3L4A6NDZ8 208 aaPredicted RBP15.94■□□□□ 0.14
RUNX3-202ENST00000338888 MBD3L3A6NE82 208 aaPredicted RBP15.94■□□□□ 0.14
RUNX3-202ENST00000338888 MBD3L5A6NJ08 208 aaPredicted RBP15.94■□□□□ 0.14
RUNX3-202ENST00000338888 GATA1P15976 413 aaPredicted RBP15.94■□□□□ 0.14
RUNX3-202ENST00000338888 CD40P25942 277 aa15.94■□□□□ 0.14
RUNX3-202ENST00000338888 CKS1BP61024 79 aa15.94■□□□□ 0.14
RUNX3-202ENST00000338888 FAM27E3Q08E93 113 aa15.94■□□□□ 0.14
RUNX3-202ENST00000338888 C12orf74Q32Q52 190 aa15.94■□□□□ 0.14
RUNX3-202ENST00000338888 SVIPQ8NHG7 77 aa15.94■□□□□ 0.14
RUNX3-202ENST00000338888 MBD3L2Q8NHZ7 208 aaPredicted RBP15.94■□□□□ 0.14
RUNX3-202ENST00000338888 TRAV40A0A0B4J280 105 aa15.93■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms