RNA–Protein interactions for RNA: ENST00000338508.8

SHANK2-201, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 5 BASIC

Gene SHANK2, Length 7,271 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-201ENST00000338508 LINC00479Q96M42 142 aa9.57□□□□□ -0.88
SHANK2-201ENST00000338508 CITED1Q99966 193 aa9.57□□□□□ -0.88
SHANK2-201ENST00000338508 DAZ1Q9NQZ3 744 aaKnown RBP9.57□□□□□ -0.88
SHANK2-201ENST00000338508 EFNA2O43921 213 aa9.57□□□□□ -0.88
SHANK2-201ENST00000338508 CD5P06127 495 aa9.57□□□□□ -0.88
SHANK2-201ENST00000338508 IGFBP3P17936 291 aaPredicted RBP9.57□□□□□ -0.88
SHANK2-201ENST00000338508 NEGR1Q7Z3B1 354 aa9.57□□□□□ -0.88
SHANK2-201ENST00000338508 CRLF1O75462 422 aa9.57□□□□□ -0.88
SHANK2-201ENST00000338508 CSRP1P21291 193 aaKnown RBP9.57□□□□□ -0.88
SHANK2-201ENST00000338508 SIGLEC9Q9Y336 463 aa9.57□□□□□ -0.88
SHANK2-201ENST00000338508 APOC4P55056 127 aa9.57□□□□□ -0.88
SHANK2-201ENST00000338508 AGMATQ9BSE5 352 aa9.57□□□□□ -0.88
SHANK2-201ENST00000338508 SMPXQ9UHP9 88 aa9.56□□□□□ -0.88
SHANK2-201ENST00000338508 FAM90A9PA6NNJ1 464 aa9.56□□□□□ -0.88
SHANK2-201ENST00000338508 ZC2HC1BQ5TFG8 222 aa9.56□□□□□ -0.88
SHANK2-201ENST00000338508 GLRX5Q86SX6 157 aa9.56□□□□□ -0.88
SHANK2-201ENST00000338508 NDUFAF3Q9BU61 184 aa9.56□□□□□ -0.88
SHANK2-201ENST00000338508 HEPN1Q6WQI6 88 aa9.56□□□□□ -0.88
SHANK2-201ENST00000338508 Q6ZQT7 251 aa9.56□□□□□ -0.88
SHANK2-201ENST00000338508 FBLIM1Q8WUP2 373 aa9.56□□□□□ -0.88
SHANK2-201ENST00000338508 TRGV9Q99603 122 aa9.56□□□□□ -0.88
SHANK2-201ENST00000338508 ARID2Q68CP9 1835 aa9.56□□□□□ -0.88
SHANK2-201ENST00000338508 TRPT1Q86TN4 253 aaKnown RBP9.56□□□□□ -0.88
SHANK2-201ENST00000338508 PRSS57Q6UWY2 283 aa9.56□□□□□ -0.88
SHANK2-201ENST00000338508 CHAC1Q9BUX1 264 aa9.56□□□□□ -0.88
SHANK2-201ENST00000338508 BRCA1P38398 1863 aaKnown RBP9.55□□□□□ -0.88
SHANK2-201ENST00000338508 UBE2E1P51965 193 aa9.55□□□□□ -0.88
SHANK2-201ENST00000338508 ADAMTSL5Q6ZMM2 481 aa9.55□□□□□ -0.88
SHANK2-201ENST00000338508 RPRMLQ8N4K4 120 aa9.55□□□□□ -0.88
SHANK2-201ENST00000338508 GAFA1Q96PS6 74 aa9.55□□□□□ -0.88
SHANK2-201ENST00000338508 HIST1H2BLQ99880 126 aa9.55□□□□□ -0.88
SHANK2-201ENST00000338508 PKDREJQ9NTG1 2253 aa9.55□□□□□ -0.88
SHANK2-201ENST00000338508 IGKV1-12A0A0C4DH73 117 aa9.55□□□□□ -0.88
SHANK2-201ENST00000338508 IGKV1D-12P01611 117 aa9.55□□□□□ -0.88
SHANK2-201ENST00000338508 MSMBP08118 114 aa9.55□□□□□ -0.88
SHANK2-201ENST00000338508 NTF4P34130 210 aa9.55□□□□□ -0.88
SHANK2-201ENST00000338508 COL5A3P25940 1745 aaPredicted RBP9.55□□□□□ -0.88
SHANK2-201ENST00000338508 ATP6V0E1O15342 81 aa9.55□□□□□ -0.88
SHANK2-201ENST00000338508 TNS1Q9HBL0 1735 aaKnown RBP9.55□□□□□ -0.88
SHANK2-201ENST00000338508 RPP25LQ8N5L8 163 aaKnown RBP9.55□□□□□ -0.88
SHANK2-201ENST00000338508 WNK3Q9BYP7 1800 aa9.55□□□□□ -0.88
SHANK2-201ENST00000338508 G3V318 75 aa9.54□□□□□ -0.88
SHANK2-201ENST00000338508 CHKB-CPT1BH3BT56 60 aa9.54□□□□□ -0.88
SHANK2-201ENST00000338508 XCL1P47992 114 aa9.54□□□□□ -0.88
SHANK2-201ENST00000338508 PLSCR4Q9NRQ2 329 aa9.54□□□□□ -0.88
SHANK2-201ENST00000338508 COL24A1Q17RW2 1714 aa9.54□□□□□ -0.88
SHANK2-201ENST00000338508 TNCP24821 2201 aa9.54□□□□□ -0.88
SHANK2-201ENST00000338508 M0R1W7 72 aa9.54□□□□□ -0.88
SHANK2-201ENST00000338508 TMEM213A2RRL7 107 aa9.54□□□□□ -0.88
SHANK2-201ENST00000338508 MST1LQ2TV78 715 aa9.54□□□□□ -0.88
SHANK2-201ENST00000338508 MPV17L2Q567V2 206 aa9.54□□□□□ -0.88
SHANK2-201ENST00000338508 MRPL52Q86TS9 123 aaKnown RBP9.54□□□□□ -0.88
SHANK2-201ENST00000338508 TMEM243Q9BU79 118 aa9.54□□□□□ -0.88
SHANK2-201ENST00000338508 IGHG4P01861 327 aa9.54□□□□□ -0.88
SHANK2-201ENST00000338508 CRYGCP07315 174 aa9.54□□□□□ -0.88
SHANK2-201ENST00000338508 SRRM5B3KS81 715 aa9.53□□□□□ -0.88
SHANK2-201ENST00000338508 H0YIZ8 118 aa9.53□□□□□ -0.88
SHANK2-201ENST00000338508 IGKV1-27A0A075B6S5 117 aa9.53□□□□□ -0.88
SHANK2-201ENST00000338508 LINC00473A8K010 186 aa9.53□□□□□ -0.88
SHANK2-201ENST00000338508 E7EQL1 145 aa9.53□□□□□ -0.88
SHANK2-201ENST00000338508 GAS1P54826 345 aa9.53□□□□□ -0.88
SHANK2-201ENST00000338508 GGNQ86UU5 652 aa9.53□□□□□ -0.88
SHANK2-201ENST00000338508 SPTAN1Q13813 2472 aaKnown RBP9.53□□□□□ -0.88
SHANK2-201ENST00000338508 WDR83OSQ9Y284 106 aa9.53□□□□□ -0.88
SHANK2-201ENST00000338508 HELZP42694 1942 aaKnown RBP9.53□□□□□ -0.88
SHANK2-201ENST00000338508 EML6Q6ZMW3 1958 aa9.53□□□□□ -0.88
SHANK2-201ENST00000338508 IFI6P09912 130 aa9.53□□□□□ -0.88
SHANK2-201ENST00000338508 SLC25A16P16260 332 aa9.53□□□□□ -0.88
SHANK2-201ENST00000338508 ASPHD1Q5U4P2 390 aa9.53□□□□□ -0.88
SHANK2-201ENST00000338508 IGKV1-16P04430 117 aa9.53□□□□□ -0.88
SHANK2-201ENST00000338508 RSPO3Q9BXY4 272 aaPredicted RBP9.53□□□□□ -0.88
SHANK2-201ENST00000338508 HLA-DRB4P13762 266 aa9.53□□□□□ -0.88
SHANK2-201ENST00000338508 UBL5Q9BZL1 73 aa9.53□□□□□ -0.88
SHANK2-201ENST00000338508 HLA-DRB4X5D2U9 266 aa9.53□□□□□ -0.88
SHANK2-201ENST00000338508 BAALCQ8WXS3 180 aa9.52□□□□□ -0.88
SHANK2-201ENST00000338508 IL18BPO95998 194 aa9.52□□□□□ -0.89
SHANK2-201ENST00000338508 CR1LQ2VPA4 569 aa9.52□□□□□ -0.89
SHANK2-201ENST00000338508 VWCEQ96DN2 955 aa9.52□□□□□ -0.89
SHANK2-201ENST00000338508 TEX48A0A1B0GUV7 120 aa9.52□□□□□ -0.89
SHANK2-201ENST00000338508 SYS1-DBNDD2H3BUS1 97 aa9.52□□□□□ -0.89
SHANK2-201ENST00000338508 AMBPP02760 352 aa9.52□□□□□ -0.89
SHANK2-201ENST00000338508 LAIR2Q6ISS4 152 aa9.52□□□□□ -0.89
SHANK2-201ENST00000338508 I3L3M4 83 aa9.52□□□□□ -0.89
SHANK2-201ENST00000338508 ZFP36L1Q07352 338 aaKnown RBP9.52□□□□□ -0.89
SHANK2-201ENST00000338508 RMI2Q96E14 147 aa9.52□□□□□ -0.89
SHANK2-201ENST00000338508 LINC01549A6NIU2 74 aa9.51□□□□□ -0.89
SHANK2-201ENST00000338508 NEUROG3Q9Y4Z2 214 aa9.51□□□□□ -0.89
SHANK2-201ENST00000338508 SBF1O95248 1867 aa9.51□□□□□ -0.89
SHANK2-201ENST00000338508 ZNF581Q9P0T4 197 aa9.51□□□□□ -0.89
SHANK2-201ENST00000338508 NCKAP5O14513 1909 aa9.51□□□□□ -0.89
SHANK2-201ENST00000338508 NBL1P41271 181 aa9.51□□□□□ -0.89
SHANK2-201ENST00000338508 MAJINQ3KP22 176 aa9.51□□□□□ -0.89
SHANK2-201ENST00000338508 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP9.51□□□□□ -0.89
SHANK2-201ENST00000338508 INAFM2P0DMQ5 153 aa9.51□□□□□ -0.89
SHANK2-201ENST00000338508 EGR2P11161 476 aaPredicted RBP9.51□□□□□ -0.89
SHANK2-201ENST00000338508 C5orf63A6NC05 138 aa9.51□□□□□ -0.89
SHANK2-201ENST00000338508 LINC00114Q6XXX2 140 aa9.51□□□□□ -0.89
SHANK2-201ENST00000338508 NOP10Q9NPE3 64 aaKnown RBP9.51□□□□□ -0.89
SHANK2-201ENST00000338508 RNASE2P10153 161 aaKnown RBP9.5□□□□□ -0.89
SHANK2-201ENST00000338508 SHANK1Q9Y566 2161 aa9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 129.4 ms