RNA–Protein interactions for RNA: ENST00000336873.9

HPS4-201, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HPS4, Length 3,786 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-201ENST00000336873 NBR2O15453 112 aa6.57□□□□□ -1.36
HPS4-201ENST00000336873 PDLIM4P50479 330 aa6.57□□□□□ -1.36
HPS4-201ENST00000336873 GTSF1LQ9H1H1 148 aa6.57□□□□□ -1.36
HPS4-201ENST00000336873 PSG8Q9UQ74 426 aa6.57□□□□□ -1.36
HPS4-201ENST00000336873 DEFB1P60022 68 aa6.57□□□□□ -1.36
HPS4-201ENST00000336873 LINC00322Q6ZN03 302 aaPredicted RBP6.57□□□□□ -1.36
HPS4-201ENST00000336873 CENPVQ7Z7K6 275 aaPredicted RBP6.57□□□□□ -1.36
HPS4-201ENST00000336873 ORAOV1Q8WV07 137 aa6.57□□□□□ -1.36
HPS4-201ENST00000336873 PTPRBP23467 1997 aa6.56□□□□□ -1.36
HPS4-201ENST00000336873 TRBV9A0A0B4J1U6 114 aa6.56□□□□□ -1.36
HPS4-201ENST00000336873 STPG4Q8N801 248 aa6.56□□□□□ -1.36
HPS4-201ENST00000336873 ARPC1AQ92747 370 aa6.56□□□□□ -1.36
HPS4-201ENST00000336873 C1orf159Q96HA4 380 aa6.56□□□□□ -1.36
HPS4-201ENST00000336873 C15orf32Q32M92 178 aa6.56□□□□□ -1.36
HPS4-201ENST00000336873 RBPMS2Q6ZRY4 209 aaKnown RBP6.56□□□□□ -1.36
HPS4-201ENST00000336873 Q8N7P7 452 aa6.56□□□□□ -1.36
HPS4-201ENST00000336873 C8orf46Q8TAG6 207 aa6.56□□□□□ -1.36
HPS4-201ENST00000336873 C16orf92Q96LL3 132 aa6.56□□□□□ -1.36
HPS4-201ENST00000336873 MSRB2Q9Y3D2 182 aa6.56□□□□□ -1.36
HPS4-201ENST00000336873 TRAV9-1A0A075B6T8 112 aa6.56□□□□□ -1.36
HPS4-201ENST00000336873 TRAV8-6A0A0B4J262 113 aa6.56□□□□□ -1.36
HPS4-201ENST00000336873 C9JCJ5 164 aa6.56□□□□□ -1.36
HPS4-201ENST00000336873 D6R8Y8 96 aa6.56□□□□□ -1.36
HPS4-201ENST00000336873 TMEM155Q4W5P6 130 aa6.56□□□□□ -1.36
HPS4-201ENST00000336873 FAM74A4Q5TZK3 123 aa6.56□□□□□ -1.36
HPS4-201ENST00000336873 ZNF48Q96MX3 618 aaPredicted RBP6.56□□□□□ -1.36
HPS4-201ENST00000336873 C19orf24Q9BVV8 132 aa6.56□□□□□ -1.36
HPS4-201ENST00000336873 K7EMI3 77 aa6.55□□□□□ -1.36
HPS4-201ENST00000336873 LYZL1Q6UWQ5 148 aa6.55□□□□□ -1.36
HPS4-201ENST00000336873 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa6.55□□□□□ -1.36
HPS4-201ENST00000336873 C11orf44Q8N8P7 122 aa6.55□□□□□ -1.36
HPS4-201ENST00000336873 FXYD5Q96DB9 178 aa6.55□□□□□ -1.36
HPS4-201ENST00000336873 PYGO2Q9BRQ0 406 aa6.55□□□□□ -1.36
HPS4-201ENST00000336873 CRYBG3Q68DQ2 2970 aa6.55□□□□□ -1.36
HPS4-201ENST00000336873 FAM181BA6NEQ2 426 aa6.55□□□□□ -1.36
HPS4-201ENST00000336873 GCSHP23434 173 aa6.55□□□□□ -1.36
HPS4-201ENST00000336873 CKS1BP61024 79 aa6.55□□□□□ -1.36
HPS4-201ENST00000336873 CACNG7P62955 275 aa6.55□□□□□ -1.36
HPS4-201ENST00000336873 RHOGP84095 191 aa6.55□□□□□ -1.36
HPS4-201ENST00000336873 AMMECR1LQ6DCA0 310 aa6.55□□□□□ -1.36
HPS4-201ENST00000336873 FAM71F2Q6NXP2 309 aa6.55□□□□□ -1.36
HPS4-201ENST00000336873 PRSS57Q6UWY2 283 aa6.55□□□□□ -1.36
HPS4-201ENST00000336873 BPESC1Q9GZL8 116 aa6.55□□□□□ -1.36
HPS4-201ENST00000336873 TMEM160Q9NX00 188 aa6.55□□□□□ -1.36
HPS4-201ENST00000336873 FLNBO75369 2602 aaKnown RBP6.55□□□□□ -1.36
HPS4-201ENST00000336873 FLNCQ14315 2725 aa6.55□□□□□ -1.36
HPS4-201ENST00000336873 IGLC7A0M8Q6 106 aa6.55□□□□□ -1.36
HPS4-201ENST00000336873 IFI27P40305 119 aaPredicted RBP6.55□□□□□ -1.36
HPS4-201ENST00000336873 GATA4P43694 442 aa6.55□□□□□ -1.36
HPS4-201ENST00000336873 SLC25A34Q6PIV7 304 aa6.55□□□□□ -1.36
HPS4-201ENST00000336873 ZNF833PQ6ZTB9 187 aa6.55□□□□□ -1.36
HPS4-201ENST00000336873 VMO1Q7Z5L0 202 aa6.55□□□□□ -1.36
HPS4-201ENST00000336873 PRELID3AQ96N28 172 aa6.55□□□□□ -1.36
HPS4-201ENST00000336873 A6NJY4 79 aa6.54□□□□□ -1.36
HPS4-201ENST00000336873 K7ENP7 123 aa6.54□□□□□ -1.36
HPS4-201ENST00000336873 IGLL1P15814 213 aa6.54□□□□□ -1.36
HPS4-201ENST00000336873 EIF4EBP1Q13541 118 aaPredicted RBP6.54□□□□□ -1.36
HPS4-201ENST00000336873 CDSNQ15517 529 aa6.54□□□□□ -1.36
HPS4-201ENST00000336873 IGFL3Q6UXB1 125 aa6.54□□□□□ -1.36
HPS4-201ENST00000336873 FAM167A-AS1Q96KT0 104 aa6.54□□□□□ -1.36
HPS4-201ENST00000336873 TP53TG3Q9ULZ0 132 aa6.54□□□□□ -1.36
HPS4-201ENST00000336873 FAM90A9PA6NNJ1 464 aa6.54□□□□□ -1.36
HPS4-201ENST00000336873 SHISA9B4DS77 424 aa6.54□□□□□ -1.36
HPS4-201ENST00000336873 NDUFB8O95169 186 aa6.54□□□□□ -1.36
HPS4-201ENST00000336873 TYMSP04818 313 aa6.54□□□□□ -1.36
HPS4-201ENST00000336873 FAM106CPP0CH98 169 aa6.54□□□□□ -1.36
HPS4-201ENST00000336873 YPEL3P61236 119 aaPredicted RBP6.54□□□□□ -1.36
HPS4-201ENST00000336873 OR1N2Q8NGR9 330 aa6.54□□□□□ -1.36
HPS4-201ENST00000336873 COX11Q9Y6N1 276 aa6.54□□□□□ -1.36
HPS4-201ENST00000336873 AKAP9Q99996 3911 aa6.54□□□□□ -1.36
HPS4-201ENST00000336873 ANKRD17O75179 2603 aaKnown RBP6.54□□□□□ -1.36
HPS4-201ENST00000336873 TRAV40A0A0B4J280 105 aa6.54□□□□□ -1.36
HPS4-201ENST00000336873 EBLN2Q6P2I7 272 aa6.54□□□□□ -1.36
HPS4-201ENST00000336873 Q8NA96 180 aa6.54□□□□□ -1.36
HPS4-201ENST00000336873 TNRC6BQ9UPQ9 1833 aaKnown RBP6.53□□□□□ -1.36
HPS4-201ENST00000336873 MSRB1Q9NZV6 116 aa6.53□□□□□ -1.36
HPS4-201ENST00000336873 ITPR1Q14643 2758 aa6.53□□□□□ -1.36
HPS4-201ENST00000336873 TRAV30A0A087WSZ9 112 aa6.53□□□□□ -1.36
HPS4-201ENST00000336873 A0A1B0GW15 77 aa6.53□□□□□ -1.36
HPS4-201ENST00000336873 GAGE12BA1L429 117 aa6.53□□□□□ -1.36
HPS4-201ENST00000336873 TRGV3P03979 118 aa6.53□□□□□ -1.36
HPS4-201ENST00000336873 CGB3P0DN86 165 aa6.53□□□□□ -1.36
HPS4-201ENST00000336873 CGB7P0DN87 165 aa6.53□□□□□ -1.36
HPS4-201ENST00000336873 EMP1P54849 157 aa6.53□□□□□ -1.36
HPS4-201ENST00000336873 HIST1H1AQ02539 215 aaPredicted RBP6.53□□□□□ -1.36
HPS4-201ENST00000336873 FAM120AOSQ5T036 256 aa6.53□□□□□ -1.36
HPS4-201ENST00000336873 TMEM78Q5T7P6 136 aa6.53□□□□□ -1.36
HPS4-201ENST00000336873 IGFL2Q6UWQ7 119 aa6.53□□□□□ -1.36
HPS4-201ENST00000336873 PRSS46E5RG02 174 aa6.53□□□□□ -1.36
HPS4-201ENST00000336873 RPL7P18124 248 aaKnown RBP6.53□□□□□ -1.36
HPS4-201ENST00000336873 GUSBP1Q15486 140 aa6.53□□□□□ -1.36
HPS4-201ENST00000336873 NRGNQ92686 78 aa6.53□□□□□ -1.36
HPS4-201ENST00000336873 VKORC1Q9BQB6 163 aa6.53□□□□□ -1.36
HPS4-201ENST00000336873 HSPB8Q9UJY1 196 aa6.53□□□□□ -1.36
HPS4-201ENST00000336873 TRAV26-2A0A0B4J265 109 aa6.52□□□□□ -1.37
HPS4-201ENST00000336873 IGLC1P0CG04 106 aa6.52□□□□□ -1.37
HPS4-201ENST00000336873 GATA1P15976 413 aaPredicted RBP6.52□□□□□ -1.37
HPS4-201ENST00000336873 ATP5J2P56134 94 aa6.52□□□□□ -1.37
HPS4-201ENST00000336873 GDF5OSQ5U4N7 250 aa6.52□□□□□ -1.37
HPS4-201ENST00000336873 IGF2-ASQ6U949 168 aa6.52□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms