RNA–Protein interactions for RNA: ENST00000335793.3

CDC42EP4-201, Transcript of CDC42 effector protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42EP4, Length 3,272 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP4-201ENST00000335793 RABAC1Q9UI14 185 aa13.12□□□□□ -0.31
CDC42EP4-201ENST00000335793 INS-IGF2F8WCM5 200 aa13.12□□□□□ -0.31
CDC42EP4-201ENST00000335793 IL4P05112 153 aa13.12□□□□□ -0.31
CDC42EP4-201ENST00000335793 PRSS3P2Q8NHM4 247 aa13.12□□□□□ -0.31
CDC42EP4-201ENST00000335793 ARPC1AQ92747 370 aa13.12□□□□□ -0.31
CDC42EP4-201ENST00000335793 PPIFP30405 207 aaKnown RBP13.12□□□□□ -0.31
CDC42EP4-201ENST00000335793 LOC389332A0A1B0GUA5 103 aa13.11□□□□□ -0.31
CDC42EP4-201ENST00000335793 B5MCH6 92 aa13.11□□□□□ -0.31
CDC42EP4-201ENST00000335793 K7ERJ3 54 aa13.11□□□□□ -0.31
CDC42EP4-201ENST00000335793 HLA-DRB1P01911 266 aa13.11□□□□□ -0.31
CDC42EP4-201ENST00000335793 GP9P14770 177 aa13.11□□□□□ -0.31
CDC42EP4-201ENST00000335793 RNF183Q96D59 192 aa13.11□□□□□ -0.31
CDC42EP4-201ENST00000335793 MAP1LC3CQ9BXW4 147 aa13.11□□□□□ -0.31
CDC42EP4-201ENST00000335793 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP13.11□□□□□ -0.31
CDC42EP4-201ENST00000335793 BUB1B-PAK6H3BSN5 160 aa13.11□□□□□ -0.31
CDC42EP4-201ENST00000335793 M0R3E3 92 aa13.11□□□□□ -0.31
CDC42EP4-201ENST00000335793 CT45A10P0DMU9 189 aa13.11□□□□□ -0.31
CDC42EP4-201ENST00000335793 C2orf91Q6ZV80 131 aa13.11□□□□□ -0.31
CDC42EP4-201ENST00000335793 SCNM1Q9BWG6 230 aa13.11□□□□□ -0.31
CDC42EP4-201ENST00000335793 A0A1W2PPM0 123 aa13.1□□□□□ -0.31
CDC42EP4-201ENST00000335793 Q71RC1 249 aaPredicted RBP13.1□□□□□ -0.31
CDC42EP4-201ENST00000335793 OR2J3O76001 311 aa13.1□□□□□ -0.31
CDC42EP4-201ENST00000335793 FSTL3O95633 263 aa13.1□□□□□ -0.31
CDC42EP4-201ENST00000335793 MYCNOSP40205 109 aa13.1□□□□□ -0.31
CDC42EP4-201ENST00000335793 OTORQ9NRC9 128 aa13.1□□□□□ -0.31
CDC42EP4-201ENST00000335793 ZFYVE26Q68DK2 2539 aa13.1□□□□□ -0.31
CDC42EP4-201ENST00000335793 IGHV1-24A0A0C4DH33 117 aa13.1□□□□□ -0.31
CDC42EP4-201ENST00000335793 NCBP2LA6PVI3 153 aaKnown RBP13.1□□□□□ -0.31
CDC42EP4-201ENST00000335793 KLF5Q13887 457 aaPredicted RBP13.1□□□□□ -0.31
CDC42EP4-201ENST00000335793 SAMD5Q5TGI4 173 aa13.1□□□□□ -0.31
CDC42EP4-201ENST00000335793 AMTNQ6UX39 209 aa13.1□□□□□ -0.31
CDC42EP4-201ENST00000335793 SMIM20Q8N5G0 67 aa13.1□□□□□ -0.31
CDC42EP4-201ENST00000335793 MRAP2Q96G30 205 aa13.1□□□□□ -0.31
CDC42EP4-201ENST00000335793 PTPRQQ9UMZ3 2332 aa13.1□□□□□ -0.31
CDC42EP4-201ENST00000335793 IGHV3-35A0A0C4DH35 117 aa13.09□□□□□ -0.31
CDC42EP4-201ENST00000335793 TIMM23O14925 209 aa13.09□□□□□ -0.31
CDC42EP4-201ENST00000335793 LTAP01374 205 aa13.09□□□□□ -0.31
CDC42EP4-201ENST00000335793 NBL1P41271 181 aa13.09□□□□□ -0.31
CDC42EP4-201ENST00000335793 FA2HQ7L5A8 372 aa13.09□□□□□ -0.31
CDC42EP4-201ENST00000335793 Q86TA4 180 aa13.09□□□□□ -0.31
CDC42EP4-201ENST00000335793 MLST8Q9BVC4 326 aa13.09□□□□□ -0.31
CDC42EP4-201ENST00000335793 KLF12Q9Y4X4 402 aa13.09□□□□□ -0.31
CDC42EP4-201ENST00000335793 IGHV3OR16-8A0A075B7F1 116 aa13.09□□□□□ -0.31
CDC42EP4-201ENST00000335793 IGHV3-23P01764 117 aa13.09□□□□□ -0.31
CDC42EP4-201ENST00000335793 FOXC1Q12948 553 aa13.09□□□□□ -0.31
CDC42EP4-201ENST00000335793 ZNF479Q96JC4 524 aa13.09□□□□□ -0.31
CDC42EP4-201ENST00000335793 A0A1B0GUT8 65 aa13.08□□□□□ -0.31
CDC42EP4-201ENST00000335793 A0A1B0GW15 77 aa13.08□□□□□ -0.31
CDC42EP4-201ENST00000335793 CRYGCP07315 174 aa13.08□□□□□ -0.31
CDC42EP4-201ENST00000335793 ARMS2P0C7Q2 107 aa13.08□□□□□ -0.31
CDC42EP4-201ENST00000335793 GCSHP23434 173 aa13.08□□□□□ -0.31
CDC42EP4-201ENST00000335793 TMUB1Q9BVT8 246 aa13.08□□□□□ -0.31
CDC42EP4-201ENST00000335793 A0A1B0GXF2 115 aa13.08□□□□□ -0.32
CDC42EP4-201ENST00000335793 CLEC3BP05452 202 aa13.08□□□□□ -0.32
CDC42EP4-201ENST00000335793 SCGB1A1P11684 91 aa13.08□□□□□ -0.32
CDC42EP4-201ENST00000335793 NMUP48645 174 aa13.08□□□□□ -0.32
CDC42EP4-201ENST00000335793 SEC11AP67812 179 aa13.08□□□□□ -0.32
CDC42EP4-201ENST00000335793 BOD1L2Q8IYS8 172 aa13.08□□□□□ -0.32
CDC42EP4-201ENST00000335793 C7orf69Q9H7B7 122 aa13.08□□□□□ -0.32
CDC42EP4-201ENST00000335793 H3BRM9 83 aa13.08□□□□□ -0.32
CDC42EP4-201ENST00000335793 APOHP02749 345 aaPredicted RBP13.08□□□□□ -0.32
CDC42EP4-201ENST00000335793 DLX6P56179 175 aa13.08□□□□□ -0.32
CDC42EP4-201ENST00000335793 FXYD7P58549 80 aa13.08□□□□□ -0.32
CDC42EP4-201ENST00000335793 RIGQ13278 110 aa13.08□□□□□ -0.32
CDC42EP4-201ENST00000335793 SHISA9B4DS77 424 aa13.07□□□□□ -0.32
CDC42EP4-201ENST00000335793 OR5AL1P0C617 328 aa13.07□□□□□ -0.32
CDC42EP4-201ENST00000335793 SPAG8Q99932 426 aaPredicted RBP13.07□□□□□ -0.32
CDC42EP4-201ENST00000335793 AAMDCQ9H7C9 122 aa13.07□□□□□ -0.32
CDC42EP4-201ENST00000335793 HSPB8Q9UJY1 196 aa13.07□□□□□ -0.32
CDC42EP4-201ENST00000335793 B9A039 149 aa13.07□□□□□ -0.32
CDC42EP4-201ENST00000335793 LIPFP07098 398 aa13.07□□□□□ -0.32
CDC42EP4-201ENST00000335793 OR8A1Q8NGG7 326 aa13.07□□□□□ -0.32
CDC42EP4-201ENST00000335793 URB1-AS1Q96HZ7 61 aa13.07□□□□□ -0.32
CDC42EP4-201ENST00000335793 AP5S1Q9NUS5 200 aa13.07□□□□□ -0.32
CDC42EP4-201ENST00000335793 KAAG1Q9UBP8 84 aa13.07□□□□□ -0.32
CDC42EP4-201ENST00000335793 PSG8Q9UQ74 426 aa13.07□□□□□ -0.32
CDC42EP4-201ENST00000335793 EPG5Q9HCE0 2579 aa13.06□□□□□ -0.32
CDC42EP4-201ENST00000335793 J3QR89 54 aa13.06□□□□□ -0.32
CDC42EP4-201ENST00000335793 CSN1S1P47710 185 aa13.06□□□□□ -0.32
CDC42EP4-201ENST00000335793 MRGPRG-AS1Q2M3A8 158 aa13.06□□□□□ -0.32
CDC42EP4-201ENST00000335793 C20orf78Q9BR46 151 aa13.06□□□□□ -0.32
CDC42EP4-201ENST00000335793 PRSS22Q9GZN4 317 aa13.06□□□□□ -0.32
CDC42EP4-201ENST00000335793 SOX21Q9Y651 276 aaPredicted RBP13.06□□□□□ -0.32
CDC42EP4-201ENST00000335793 LRBAP50851 2863 aa13.06□□□□□ -0.32
CDC42EP4-201ENST00000335793 TEX22C9J3V5 150 aa13.06□□□□□ -0.32
CDC42EP4-201ENST00000335793 H3BMG7 143 aa13.06□□□□□ -0.32
CDC42EP4-201ENST00000335793 RNF125Q96EQ8 232 aa13.06□□□□□ -0.32
CDC42EP4-201ENST00000335793 C19orf71A6NCJ1 209 aa13.05□□□□□ -0.32
CDC42EP4-201ENST00000335793 IGKV1-17P01599 117 aa13.05□□□□□ -0.32
CDC42EP4-201ENST00000335793 SPINK8P0C7L1 97 aa13.05□□□□□ -0.32
CDC42EP4-201ENST00000335793 C8orf31Q8N9H6 132 aa13.05□□□□□ -0.32
CDC42EP4-201ENST00000335793 CHCHD1Q96BP2 118 aaKnown RBP13.05□□□□□ -0.32
CDC42EP4-201ENST00000335793 IGLV1-47P01700 117 aa13.05□□□□□ -0.32
CDC42EP4-201ENST00000335793 LCNL1Q6ZST4 164 aa13.05□□□□□ -0.32
CDC42EP4-201ENST00000335793 OR5A1Q8NGJ0 315 aa13.05□□□□□ -0.32
CDC42EP4-201ENST00000335793 ZNF492Q9P255 531 aa13.05□□□□□ -0.32
CDC42EP4-201ENST00000335793 SCGB2A1O75556 95 aa13.05□□□□□ -0.32
CDC42EP4-201ENST00000335793 SMIM17P0DL12 118 aa13.05□□□□□ -0.32
CDC42EP4-201ENST00000335793 KLRD1Q13241 179 aa13.05□□□□□ -0.32
CDC42EP4-201ENST00000335793 NCR2O95944 276 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 82 ms