RNA–Protein interactions for RNA: ENST00000334690.10

TRAPPC11-201, Transcript of trafficking protein particle complex 11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAPPC11, Length 4,552 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-201ENST00000334690 TMEM158Q8WZ71 300 aa13.72□□□□□ -0.21
TRAPPC11-201ENST00000334690 DAZ1Q9NQZ3 744 aaKnown RBP13.72□□□□□ -0.21
TRAPPC11-201ENST00000334690 SFTA2Q6UW10 78 aa13.71□□□□□ -0.21
TRAPPC11-201ENST00000334690 WFDC12Q8WWY7 111 aa13.71□□□□□ -0.21
TRAPPC11-201ENST00000334690 ZNF876PQ49A33 203 aa13.71□□□□□ -0.21
TRAPPC11-201ENST00000334690 LURAP1LQ8IV03 231 aa13.71□□□□□ -0.21
TRAPPC11-201ENST00000334690 TMEM14CQ9P0S9 112 aa13.71□□□□□ -0.21
TRAPPC11-201ENST00000334690 TRBV7-9A0A0J9YWB2 115 aa13.71□□□□□ -0.21
TRAPPC11-201ENST00000334690 NDUFS8O00217 210 aa13.71□□□□□ -0.21
TRAPPC11-201ENST00000334690 FCN3O75636 299 aa13.71□□□□□ -0.21
TRAPPC11-201ENST00000334690 C14orf178Q8N769 122 aaPredicted RBP13.71□□□□□ -0.21
TRAPPC11-201ENST00000334690 POLR3KQ9Y2Y1 108 aaPredicted RBP13.71□□□□□ -0.21
TRAPPC11-201ENST00000334690 TRAV2A0A0B4J234 112 aa13.71□□□□□ -0.22
TRAPPC11-201ENST00000334690 A0A1B0GUS0 222 aa13.71□□□□□ -0.22
TRAPPC11-201ENST00000334690 ZNF114Q8NC26 417 aa13.71□□□□□ -0.22
TRAPPC11-201ENST00000334690 NCOA6Q14686 2063 aaPredicted RBP13.7□□□□□ -0.22
TRAPPC11-201ENST00000334690 CACNA1AO00555 2505 aa13.7□□□□□ -0.22
TRAPPC11-201ENST00000334690 A0A087X0K7 114 aa13.7□□□□□ -0.22
TRAPPC11-201ENST00000334690 TRAV12-3A0A0B4J271 114 aa13.7□□□□□ -0.22
TRAPPC11-201ENST00000334690 KRTAP27-1Q3LI81 207 aa13.7□□□□□ -0.22
TRAPPC11-201ENST00000334690 C11orf53Q8IXP5 236 aa13.7□□□□□ -0.22
TRAPPC11-201ENST00000334690 SLC25A16P16260 332 aa13.69□□□□□ -0.22
TRAPPC11-201ENST00000334690 PIP4P1Q86T03 277 aa13.69□□□□□ -0.22
TRAPPC11-201ENST00000334690 TRGV4A0A0C4DH28 118 aa13.69□□□□□ -0.22
TRAPPC11-201ENST00000334690 TMEM238C9JI98 176 aa13.69□□□□□ -0.22
TRAPPC11-201ENST00000334690 TDGF1P13385 188 aa13.69□□□□□ -0.22
TRAPPC11-201ENST00000334690 PIP4P2Q8N4L2 257 aa13.69□□□□□ -0.22
TRAPPC11-201ENST00000334690 FREM1Q5H8C1 2179 aa13.69□□□□□ -0.22
TRAPPC11-201ENST00000334690 ATP6V0E1O15342 81 aa13.69□□□□□ -0.22
TRAPPC11-201ENST00000334690 FXYD7P58549 80 aa13.69□□□□□ -0.22
TRAPPC11-201ENST00000334690 FAM104BQ5XKR9 115 aa13.69□□□□□ -0.22
TRAPPC11-201ENST00000334690 THAP8Q8NA92 274 aa13.69□□□□□ -0.22
TRAPPC11-201ENST00000334690 VWC2Q2TAL6 325 aa13.69□□□□□ -0.22
TRAPPC11-201ENST00000334690 RCHY1Q96PM5 261 aa13.69□□□□□ -0.22
TRAPPC11-201ENST00000334690 PRSS46E5RG02 174 aa13.68□□□□□ -0.22
TRAPPC11-201ENST00000334690 SMKR1H3BMG3 65 aa13.68□□□□□ -0.22
TRAPPC11-201ENST00000334690 OVOL3O00110 214 aa13.68□□□□□ -0.22
TRAPPC11-201ENST00000334690 PLEKHB2Q96CS7 222 aa13.68□□□□□ -0.22
TRAPPC11-201ENST00000334690 FGF23Q9GZV9 251 aaPredicted RBP13.68□□□□□ -0.22
TRAPPC11-201ENST00000334690 TNFRSF6BO95407 300 aa13.68□□□□□ -0.22
TRAPPC11-201ENST00000334690 UNQ6494/PRO21346Q6UXR6 183 aa13.68□□□□□ -0.22
TRAPPC11-201ENST00000334690 CSTL1Q9H114 145 aa13.68□□□□□ -0.22
TRAPPC11-201ENST00000334690 RBMY1BA6NDE4 496 aaKnown RBP13.68□□□□□ -0.22
TRAPPC11-201ENST00000334690 RBMY1EA6NEQ0 496 aaKnown RBP13.68□□□□□ -0.22
TRAPPC11-201ENST00000334690 RBMY1DP0C7P1 496 aaKnown RBP13.68□□□□□ -0.22
TRAPPC11-201ENST00000334690 IGLC1P0CG04 106 aa13.68□□□□□ -0.22
TRAPPC11-201ENST00000334690 RBMY1A1P0DJD3 496 aaKnown RBP13.68□□□□□ -0.22
TRAPPC11-201ENST00000334690 RBMY1CP0DJD4 496 aa13.68□□□□□ -0.22
TRAPPC11-201ENST00000334690 ZNF415Q09FC8 603 aa13.68□□□□□ -0.22
TRAPPC11-201ENST00000334690 GAGE13Q4V321 117 aa13.68□□□□□ -0.22
TRAPPC11-201ENST00000334690 CFAP161Q6P656 301 aa13.68□□□□□ -0.22
TRAPPC11-201ENST00000334690 C8orf31Q8N9H6 132 aa13.68□□□□□ -0.22
TRAPPC11-201ENST00000334690 IGKV3D-20A0A0C4DH25 116 aa13.67□□□□□ -0.22
TRAPPC11-201ENST00000334690 SMIM27A0A1W2PRY6 76 aa13.67□□□□□ -0.22
TRAPPC11-201ENST00000334690 TDGF1P3P51864 188 aa13.67□□□□□ -0.22
TRAPPC11-201ENST00000334690 A8MWV9 139 aa13.67□□□□□ -0.22
TRAPPC11-201ENST00000334690 CD5LO43866 347 aa13.67□□□□□ -0.22
TRAPPC11-201ENST00000334690 IGHV2-70P01814 119 aa13.67□□□□□ -0.22
TRAPPC11-201ENST00000334690 MORN3Q6PF18 240 aaPredicted RBP13.67□□□□□ -0.22
TRAPPC11-201ENST00000334690 GATA3P23771 443 aa13.67□□□□□ -0.22
TRAPPC11-201ENST00000334690 TPSG1Q9NRR2 321 aa13.67□□□□□ -0.22
TRAPPC11-201ENST00000334690 ERG28Q9UKR5 140 aa13.67□□□□□ -0.22
TRAPPC11-201ENST00000334690 ATRXP46100 2492 aa13.67□□□□□ -0.22
TRAPPC11-201ENST00000334690 TRAV8-2A0A0B4J237 113 aa13.66□□□□□ -0.22
TRAPPC11-201ENST00000334690 TSPAN13O95857 204 aa13.66□□□□□ -0.22
TRAPPC11-201ENST00000334690 UBE2V1Q13404 147 aa13.66□□□□□ -0.22
TRAPPC11-201ENST00000334690 TRAV16A0A0A6YYK6 109 aaPredicted RBP13.66□□□□□ -0.22
TRAPPC11-201ENST00000334690 ERCC8Q13216 396 aa13.66□□□□□ -0.22
TRAPPC11-201ENST00000334690 TMEM213A2RRL7 107 aa13.66□□□□□ -0.22
TRAPPC11-201ENST00000334690 RPL36AP83881 106 aaKnown RBP13.66□□□□□ -0.22
TRAPPC11-201ENST00000334690 SLAQ13239 276 aa13.66□□□□□ -0.22
TRAPPC11-201ENST00000334690 RPL36ALQ969Q0 106 aaKnown RBP13.66□□□□□ -0.22
TRAPPC11-201ENST00000334690 PRR25Q96S07 402 aa13.66□□□□□ -0.22
TRAPPC11-201ENST00000334690 C11orf44Q8N8P7 122 aa13.66□□□□□ -0.22
TRAPPC11-201ENST00000334690 EREGO14944 169 aa13.65□□□□□ -0.22
TRAPPC11-201ENST00000334690 PAX2Q02962 417 aa13.65□□□□□ -0.22
TRAPPC11-201ENST00000334690 C10orf126Q8N4M7 172 aa13.65□□□□□ -0.22
TRAPPC11-201ENST00000334690 FXYD5Q96DB9 178 aa13.65□□□□□ -0.22
TRAPPC11-201ENST00000334690 H3BRN7 92 aa13.65□□□□□ -0.22
TRAPPC11-201ENST00000334690 IGFL2Q6UWQ7 119 aa13.65□□□□□ -0.22
TRAPPC11-201ENST00000334690 SPOCK3Q9BQ16 436 aa13.65□□□□□ -0.22
TRAPPC11-201ENST00000334690 LSM4Q9Y4Z0 139 aaKnown RBP13.65□□□□□ -0.22
TRAPPC11-201ENST00000334690 MSMBP08118 114 aa13.65□□□□□ -0.22
TRAPPC11-201ENST00000334690 IGHV2-70DA0A0C4DH43 119 aa13.64□□□□□ -0.23
TRAPPC11-201ENST00000334690 MCRIP2Q9BUT9 160 aaKnown RBP13.64□□□□□ -0.23
TRAPPC11-201ENST00000334690 NOTCH2Q04721 2471 aa13.64□□□□□ -0.23
TRAPPC11-201ENST00000334690 TEX43Q6ZNM6 134 aa13.64□□□□□ -0.23
TRAPPC11-201ENST00000334690 Q6ZWC4 215 aa13.64□□□□□ -0.23
TRAPPC11-201ENST00000334690 CHCHD5Q9BSY4 110 aa13.64□□□□□ -0.23
TRAPPC11-201ENST00000334690 SELENOKQ9Y6D0 94 aa13.64□□□□□ -0.23
TRAPPC11-201ENST00000334690 IGHV1-69DA0A0B4J2H0 117 aa13.64□□□□□ -0.23
TRAPPC11-201ENST00000334690 ADARB2-AS1A8MUL3 147 aa13.64□□□□□ -0.23
TRAPPC11-201ENST00000334690 K7EM74 188 aa13.64□□□□□ -0.23
TRAPPC11-201ENST00000334690 IGHV1-69P01742 117 aa13.64□□□□□ -0.23
TRAPPC11-201ENST00000334690 IGLC2P0DOY2 106 aa13.64□□□□□ -0.23
TRAPPC11-201ENST00000334690 IGLC3P0DOY3 106 aa13.64□□□□□ -0.23
TRAPPC11-201ENST00000334690 LINC01356Q8N9X3 169 aa13.63□□□□□ -0.23
TRAPPC11-201ENST00000334690 NAA38Q9BRA0 125 aaKnown RBP13.63□□□□□ -0.23
TRAPPC11-201ENST00000334690 HTN3P15516 51 aa13.63□□□□□ -0.23
TRAPPC11-201ENST00000334690 G3V318 75 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms