RNA–Protein interactions for RNA: ENST00000331239.8

C11orf54-201, Transcript of chromosome 11 open reading frame 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C11orf54, Length 2,522 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-201ENST00000331239 APELAP0DMC3 54 aa7.33□□□□□ -1.24
C11orf54-201ENST00000331239 CRISP2P16562 243 aa7.33□□□□□ -1.24
C11orf54-201ENST00000331239 NDUFA11Q86Y39 141 aa7.33□□□□□ -1.24
C11orf54-201ENST00000331239 TMEM190Q8WZ59 177 aa7.33□□□□□ -1.24
C11orf54-201ENST00000331239 NPIPB3Q92617 1050 aa7.33□□□□□ -1.24
C11orf54-201ENST00000331239 MS4A10Q96PG2 267 aa7.33□□□□□ -1.24
C11orf54-201ENST00000331239 RNASE7Q9H1E1 156 aaKnown RBP7.33□□□□□ -1.24
C11orf54-201ENST00000331239 PEF1Q9UBV8 284 aaKnown RBP7.33□□□□□ -1.24
C11orf54-201ENST00000331239 TRAV5A0A0B4J249 113 aa7.33□□□□□ -1.24
C11orf54-201ENST00000331239 SCGB1D1O95968 90 aa7.33□□□□□ -1.24
C11orf54-201ENST00000331239 MT-ND6P03923 174 aa7.33□□□□□ -1.24
C11orf54-201ENST00000331239 C10orf113Q5VZT2 155 aa7.33□□□□□ -1.24
C11orf54-201ENST00000331239 GPHB5Q86YW7 130 aa7.33□□□□□ -1.24
C11orf54-201ENST00000331239 NDUFAF3Q9BU61 184 aa7.33□□□□□ -1.24
C11orf54-201ENST00000331239 GNB1LQ9BYB4 327 aa7.33□□□□□ -1.24
C11orf54-201ENST00000331239 TP53TG3Q9ULZ0 132 aa7.33□□□□□ -1.24
C11orf54-201ENST00000331239 F8W735 103 aaPredicted RBP7.32□□□□□ -1.24
C11orf54-201ENST00000331239 NDUFA4O00483 81 aa7.32□□□□□ -1.24
C11orf54-201ENST00000331239 IGLV2-8P01709 118 aa7.32□□□□□ -1.24
C11orf54-201ENST00000331239 CTSGP08311 255 aa7.32□□□□□ -1.24
C11orf54-201ENST00000331239 MGST1P10620 155 aaKnown RBP7.32□□□□□ -1.24
C11orf54-201ENST00000331239 ESDP10768 282 aa7.32□□□□□ -1.24
C11orf54-201ENST00000331239 LINC00310P59036 64 aa7.32□□□□□ -1.24
C11orf54-201ENST00000331239 COX19Q49B96 90 aa7.32□□□□□ -1.24
C11orf54-201ENST00000331239 Q56UQ5 140 aa7.32□□□□□ -1.24
C11orf54-201ENST00000331239 IBA57Q5T440 356 aaKnown RBP7.32□□□□□ -1.24
C11orf54-201ENST00000331239 PAXXQ9BUH6 204 aa7.32□□□□□ -1.24
C11orf54-201ENST00000331239 KLK15Q9H2R5 256 aa7.32□□□□□ -1.24
C11orf54-201ENST00000331239 NAGKQ9UJ70 344 aa7.32□□□□□ -1.24
C11orf54-201ENST00000331239 LINC00527Q9UJ94 153 aa7.32□□□□□ -1.24
C11orf54-201ENST00000331239 IGKV1D-37A0A075B6S9 117 aa7.32□□□□□ -1.24
C11orf54-201ENST00000331239 K7EMT4 169 aa7.32□□□□□ -1.24
C11orf54-201ENST00000331239 LGALS9O00182 355 aa7.32□□□□□ -1.24
C11orf54-201ENST00000331239 SERF1AO75920 110 aa7.32□□□□□ -1.24
C11orf54-201ENST00000331239 PYYP10082 97 aa7.32□□□□□ -1.24
C11orf54-201ENST00000331239 RANP62826 216 aaKnown RBP7.32□□□□□ -1.24
C11orf54-201ENST00000331239 PAFAH1B2P68402 229 aa7.32□□□□□ -1.24
C11orf54-201ENST00000331239 ZNF329Q86UD4 541 aa7.32□□□□□ -1.24
C11orf54-201ENST00000331239 CCDC140Q96MF4 163 aa7.32□□□□□ -1.24
C11orf54-201ENST00000331239 IGKV1-17P01599 117 aa7.31□□□□□ -1.24
C11orf54-201ENST00000331239 IGHV3-48P01763 117 aa7.31□□□□□ -1.24
C11orf54-201ENST00000331239 RPLP1P05386 114 aaKnown RBP7.31□□□□□ -1.24
C11orf54-201ENST00000331239 CLEC3BP05452 202 aa7.31□□□□□ -1.24
C11orf54-201ENST00000331239 FRMD6-AS1P0C7T7 363 aa7.31□□□□□ -1.24
C11orf54-201ENST00000331239 TCL1AP56279 114 aa7.31□□□□□ -1.24
C11orf54-201ENST00000331239 Q0VG73 95 aa7.31□□□□□ -1.24
C11orf54-201ENST00000331239 BAGE3Q86Y29 109 aa7.31□□□□□ -1.24
C11orf54-201ENST00000331239 BAGE2Q86Y30 109 aa7.31□□□□□ -1.24
C11orf54-201ENST00000331239 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP7.31□□□□□ -1.24
C11orf54-201ENST00000331239 MRPL36Q9P0J6 103 aaKnown RBP7.31□□□□□ -1.24
C11orf54-201ENST00000331239 NAT8BQ9UHF3 227 aa7.31□□□□□ -1.24
C11orf54-201ENST00000331239 RPH3ALQ9UNE2 315 aa7.31□□□□□ -1.24
C11orf54-201ENST00000331239 WI2-2373I1.2A0A1W2PRP0 233 aa7.31□□□□□ -1.24
C11orf54-201ENST00000331239 PEX7O00628 323 aa7.31□□□□□ -1.24
C11orf54-201ENST00000331239 ARL3P36405 182 aa7.31□□□□□ -1.24
C11orf54-201ENST00000331239 FAM106AQ4KMX7 169 aa7.31□□□□□ -1.24
C11orf54-201ENST00000331239 PATE2Q6UY27 113 aa7.31□□□□□ -1.24
C11orf54-201ENST00000331239 ZNF747Q9BV97 191 aa7.31□□□□□ -1.24
C11orf54-201ENST00000331239 KIR2DL5BA0A0G2JN68 375 aa7.3□□□□□ -1.24
C11orf54-201ENST00000331239 KIR2DL5BA0A0G2JPC4 375 aa7.3□□□□□ -1.24
C11orf54-201ENST00000331239 SMIM27A0A1W2PRY6 76 aa7.3□□□□□ -1.24
C11orf54-201ENST00000331239 SPINK4O60575 86 aa7.3□□□□□ -1.24
C11orf54-201ENST00000331239 RIPPLY3P57055 190 aa7.3□□□□□ -1.24
C11orf54-201ENST00000331239 TCTEX1D4Q5JR98 221 aa7.3□□□□□ -1.24
C11orf54-201ENST00000331239 TMEM136Q6ZRR5 245 aa7.3□□□□□ -1.24
C11orf54-201ENST00000331239 KIR2DL5AQ8N109 375 aa7.3□□□□□ -1.24
C11orf54-201ENST00000331239 NHLRC2Q8NBF2 726 aa7.3□□□□□ -1.24
C11orf54-201ENST00000331239 FXYD5Q96DB9 178 aa7.3□□□□□ -1.24
C11orf54-201ENST00000331239 C2CD3Q4AC94 2353 aa7.3□□□□□ -1.24
C11orf54-201ENST00000331239 F2Z2F3 143 aa7.3□□□□□ -1.24
C11orf54-201ENST00000331239 HLA-DQA1P01909 254 aa7.3□□□□□ -1.24
C11orf54-201ENST00000331239 MYCNOSP40205 109 aa7.3□□□□□ -1.24
C11orf54-201ENST00000331239 C19orf35Q6ZS72 473 aa7.3□□□□□ -1.24
C11orf54-201ENST00000331239 Q6ZWC4 215 aa7.3□□□□□ -1.24
C11orf54-201ENST00000331239 LINC00305Q7Z4B0 112 aa7.3□□□□□ -1.24
C11orf54-201ENST00000331239 STXBP6Q8NFX7 210 aa7.3□□□□□ -1.24
C11orf54-201ENST00000331239 CITED1Q99966 193 aa7.3□□□□□ -1.24
C11orf54-201ENST00000331239 SAMD10Q9BYL1 202 aa7.3□□□□□ -1.24
C11orf54-201ENST00000331239 ZNF705FA8MVS1 300 aaPredicted RBP7.29□□□□□ -1.24
C11orf54-201ENST00000331239 LINC01619G3V211 115 aa7.29□□□□□ -1.24
C11orf54-201ENST00000331239 BMPR1BO00238 502 aa7.29□□□□□ -1.24
C11orf54-201ENST00000331239 SNRPCP09234 159 aaKnown RBP7.29□□□□□ -1.24
C11orf54-201ENST00000331239 ZNF705DP0CH99 300 aaPredicted RBP7.29□□□□□ -1.24
C11orf54-201ENST00000331239 ZNF705BP0CI00 300 aaPredicted RBP7.29□□□□□ -1.24
C11orf54-201ENST00000331239 NUTF2P61970 127 aaKnown RBP7.29□□□□□ -1.24
C11orf54-201ENST00000331239 FHL3Q13643 280 aa7.29□□□□□ -1.24
C11orf54-201ENST00000331239 C1orf194Q5T5A4 169 aa7.29□□□□□ -1.24
C11orf54-201ENST00000331239 MRPL54Q6P161 138 aaKnown RBP7.29□□□□□ -1.24
C11orf54-201ENST00000331239 CLEC19AQ6UXS0 136 aa7.29□□□□□ -1.24
C11orf54-201ENST00000331239 FAM231DQ6ZW35 169 aa7.29□□□□□ -1.24
C11orf54-201ENST00000331239 LINC00479Q96M42 142 aa7.29□□□□□ -1.24
C11orf54-201ENST00000331239 GPR82Q96P67 336 aa7.29□□□□□ -1.24
C11orf54-201ENST00000331239 GNB4Q9HAV0 340 aa7.29□□□□□ -1.24
C11orf54-201ENST00000331239 UFC1Q9Y3C8 167 aa7.29□□□□□ -1.24
C11orf54-201ENST00000331239 HYPMO75409 117 aa7.29□□□□□ -1.24
C11orf54-201ENST00000331239 LINC00614P0C842 121 aa7.29□□□□□ -1.24
C11orf54-201ENST00000331239 RBX1P62877 108 aa7.29□□□□□ -1.24
C11orf54-201ENST00000331239 TOMM20LQ6UXN7 152 aa7.29□□□□□ -1.24
C11orf54-201ENST00000331239 PRIMA1Q86XR5 153 aa7.29□□□□□ -1.24
C11orf54-201ENST00000331239 IZUMO1RA6ND01 250 aa7.28□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms