RNA–Protein interactions for RNA: ENST00000321117.9

DNMT3A-202, Transcript of DNA methyltransferase 3 alpha, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene DNMT3A, Length 4,279 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-202ENST00000321117 CREBBPQ92793 2442 aa10.16□□□□□ -0.78
DNMT3A-202ENST00000321117 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP10.16□□□□□ -0.78
DNMT3A-202ENST00000321117 H3BRM9 83 aa10.16□□□□□ -0.78
DNMT3A-202ENST00000321117 NDUFA3O95167 84 aa10.16□□□□□ -0.78
DNMT3A-202ENST00000321117 NDUFB8O95169 186 aa10.16□□□□□ -0.78
DNMT3A-202ENST00000321117 C1orf159Q96HA4 380 aa10.16□□□□□ -0.78
DNMT3A-202ENST00000321117 M0R381 172 aa10.16□□□□□ -0.78
DNMT3A-202ENST00000321117 LGALS9BQ3B8N2 356 aa10.15□□□□□ -0.78
DNMT3A-202ENST00000321117 IGFL4Q6B9Z1 124 aa10.15□□□□□ -0.78
DNMT3A-202ENST00000321117 LGALS9CQ6DKI2 356 aa10.15□□□□□ -0.78
DNMT3A-202ENST00000321117 C9orf118A6NHY6 69 aa10.15□□□□□ -0.78
DNMT3A-202ENST00000321117 PSMB2P49721 201 aa10.15□□□□□ -0.78
DNMT3A-202ENST00000321117 SCGB3A1Q96QR1 104 aa10.15□□□□□ -0.78
DNMT3A-202ENST00000321117 A0A1B0GXF2 115 aa10.15□□□□□ -0.79
DNMT3A-202ENST00000321117 INS-IGF2F8WCM5 200 aa10.15□□□□□ -0.79
DNMT3A-202ENST00000321117 C17orf77Q96MU5 243 aa10.15□□□□□ -0.79
DNMT3A-202ENST00000321117 SRSF8Q9BRL6 282 aaKnown RBP10.15□□□□□ -0.79
DNMT3A-202ENST00000321117 C5orf64Q2M2E5 130 aa10.14□□□□□ -0.79
DNMT3A-202ENST00000321117 MRPL51Q4U2R6 128 aaKnown RBP10.14□□□□□ -0.79
DNMT3A-202ENST00000321117 ZC2HC1BQ5TFG8 222 aa10.14□□□□□ -0.79
DNMT3A-202ENST00000321117 SLC50A1Q9BRV3 221 aa10.14□□□□□ -0.79
DNMT3A-202ENST00000321117 SMPXQ9UHP9 88 aa10.14□□□□□ -0.79
DNMT3A-202ENST00000321117 H3BVH4 76 aa10.14□□□□□ -0.79
DNMT3A-202ENST00000321117 TAX1BP3O14907 124 aa10.14□□□□□ -0.79
DNMT3A-202ENST00000321117 PLA2G2CQ5R387 149 aa10.14□□□□□ -0.79
DNMT3A-202ENST00000321117 EEF1AKMT3Q96AZ1 226 aa10.14□□□□□ -0.79
DNMT3A-202ENST00000321117 ZNF479Q96JC4 524 aa10.14□□□□□ -0.79
DNMT3A-202ENST00000321117 A0A1B0GWB2 263 aa10.14□□□□□ -0.79
DNMT3A-202ENST00000321117 LINC01545Q5VT33 79 aa10.14□□□□□ -0.79
DNMT3A-202ENST00000321117 CLEC19AQ6UXS0 136 aa10.14□□□□□ -0.79
DNMT3A-202ENST00000321117 LAMA3Q16787 3333 aa10.14□□□□□ -0.79
DNMT3A-202ENST00000321117 H3BRN7 92 aa10.13□□□□□ -0.79
DNMT3A-202ENST00000321117 RHOGP84095 191 aa10.13□□□□□ -0.79
DNMT3A-202ENST00000321117 LINC01559Q495D7 138 aa10.13□□□□□ -0.79
DNMT3A-202ENST00000321117 FAM120AOSQ5T036 256 aa10.13□□□□□ -0.79
DNMT3A-202ENST00000321117 SCRT2Q9NQ03 307 aa10.13□□□□□ -0.79
DNMT3A-202ENST00000321117 IGKV1D-37A0A075B6S9 117 aa10.13□□□□□ -0.79
DNMT3A-202ENST00000321117 ZNF672Q499Z4 452 aaPredicted RBP10.13□□□□□ -0.79
DNMT3A-202ENST00000321117 K7EP13 123 aa10.13□□□□□ -0.79
DNMT3A-202ENST00000321117 TMEM158Q8WZ71 300 aa10.13□□□□□ -0.79
DNMT3A-202ENST00000321117 MRPL16Q9NX20 251 aaKnown RBP10.13□□□□□ -0.79
DNMT3A-202ENST00000321117 CTSZQ9UBR2 303 aa10.13□□□□□ -0.79
DNMT3A-202ENST00000321117 BDP1A6H8Y1 2624 aa10.13□□□□□ -0.79
DNMT3A-202ENST00000321117 DYSFO75923 2080 aa10.13□□□□□ -0.79
DNMT3A-202ENST00000321117 E7EQL1 145 aa10.13□□□□□ -0.79
DNMT3A-202ENST00000321117 WT1P19544 449 aaPredicted RBP10.13□□□□□ -0.79
DNMT3A-202ENST00000321117 PAX2Q02962 417 aa10.13□□□□□ -0.79
DNMT3A-202ENST00000321117 KLRD1Q13241 179 aa10.13□□□□□ -0.79
DNMT3A-202ENST00000321117 LINC00322Q6ZN03 302 aaPredicted RBP10.13□□□□□ -0.79
DNMT3A-202ENST00000321117 C8orf31Q8N9H6 132 aa10.13□□□□□ -0.79
DNMT3A-202ENST00000321117 RITA1Q96K30 269 aa10.13□□□□□ -0.79
DNMT3A-202ENST00000321117 RAXQ9Y2V3 346 aa10.12□□□□□ -0.79
DNMT3A-202ENST00000321117 K7EM74 188 aa10.12□□□□□ -0.79
DNMT3A-202ENST00000321117 SNCGO76070 127 aa10.12□□□□□ -0.79
DNMT3A-202ENST00000321117 SRSF1Q07955 248 aaKnown RBP eCLIP10.12□□□□□ -0.798e-8■■■■□ 19.5
DNMT3A-202ENST00000321117 PRSS57Q6UWY2 283 aa10.12□□□□□ -0.79
DNMT3A-202ENST00000321117 C19orf71A6NCJ1 209 aa10.12□□□□□ -0.79
DNMT3A-202ENST00000321117 NPYP01303 97 aa10.12□□□□□ -0.79
DNMT3A-202ENST00000321117 ATP5G2Q06055 141 aa10.12□□□□□ -0.79
DNMT3A-202ENST00000321117 IGFL2Q6UWQ7 119 aa10.12□□□□□ -0.79
DNMT3A-202ENST00000321117 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa10.12□□□□□ -0.79
DNMT3A-202ENST00000321117 SEM1Q6ZVN7 128 aa10.12□□□□□ -0.79
DNMT3A-202ENST00000321117 CHAC1Q9BUX1 264 aa10.12□□□□□ -0.79
DNMT3A-202ENST00000321117 ZNF491Q8N8L2 437 aa10.11□□□□□ -0.79
DNMT3A-202ENST00000321117 Q8N976 141 aa10.11□□□□□ -0.79
DNMT3A-202ENST00000321117 NEU4Q8WWR8 484 aaPredicted RBP10.11□□□□□ -0.79
DNMT3A-202ENST00000321117 PRR25Q96S07 402 aa10.11□□□□□ -0.79
DNMT3A-202ENST00000321117 TANC2Q9HCD6 1990 aa10.11□□□□□ -0.79
DNMT3A-202ENST00000321117 TNFRSF6BO95407 300 aa10.11□□□□□ -0.79
DNMT3A-202ENST00000321117 ANKRD39Q53RE8 183 aa10.11□□□□□ -0.79
DNMT3A-202ENST00000321117 PRSS22Q9GZN4 317 aa10.11□□□□□ -0.79
DNMT3A-202ENST00000321117 TP73-AS1Q9UF72 201 aa10.11□□□□□ -0.79
DNMT3A-202ENST00000321117 SMAGPQ0VAQ4 97 aa10.11□□□□□ -0.79
DNMT3A-202ENST00000321117 UBTD1Q9HAC8 227 aa10.11□□□□□ -0.79
DNMT3A-202ENST00000321117 K7EP34 96 aa10.1□□□□□ -0.79
DNMT3A-202ENST00000321117 IGKV1-17P01599 117 aa10.1□□□□□ -0.79
DNMT3A-202ENST00000321117 IGLV2-23P01705 113 aa10.1□□□□□ -0.79
DNMT3A-202ENST00000321117 LAGE3Q14657 143 aa10.1□□□□□ -0.79
DNMT3A-202ENST00000321117 KAAG1Q9UBP8 84 aa10.1□□□□□ -0.79
DNMT3A-202ENST00000321117 RANBP2P49792 3224 aaKnown RBP10.1□□□□□ -0.79
DNMT3A-202ENST00000321117 NDUFS8O00217 210 aa10.1□□□□□ -0.79
DNMT3A-202ENST00000321117 C15orf32Q32M92 178 aa10.1□□□□□ -0.79
DNMT3A-202ENST00000321117 SIGMAR1Q99720 223 aa10.1□□□□□ -0.79
DNMT3A-202ENST00000321117 MLST8Q9BVC4 326 aa10.1□□□□□ -0.79
DNMT3A-202ENST00000321117 LINC00574Q9H8X3 128 aa10.1□□□□□ -0.79
DNMT3A-202ENST00000321117 ASIPP42127 132 aa10.1□□□□□ -0.79
DNMT3A-202ENST00000321117 SIGLEC15Q6ZMC9 328 aa10.09□□□□□ -0.79
DNMT3A-202ENST00000321117 VKORC1Q9BQB6 163 aa10.09□□□□□ -0.79
DNMT3A-202ENST00000321117 CRYGCP07315 174 aa10.09□□□□□ -0.79
DNMT3A-202ENST00000321117 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP10.09□□□□□ -0.792e-7■■■□□ 17.3
DNMT3A-202ENST00000321117 IGFL3Q6UXB1 125 aa10.09□□□□□ -0.79
DNMT3A-202ENST00000321117 ANKHD1Q8IWZ3 2542 aaKnown RBP10.09□□□□□ -0.79
DNMT3A-202ENST00000321117 APOMO95445 188 aa10.09□□□□□ -0.79
DNMT3A-202ENST00000321117 NDUFS7O75251 213 aa10.08□□□□□ -0.8
DNMT3A-202ENST00000321117 ERCC8Q13216 396 aa10.08□□□□□ -0.8
DNMT3A-202ENST00000321117 PRRC2CQ9Y520 2896 aaKnown RBP10.08□□□□□ -0.8
DNMT3A-202ENST00000321117 PF4V1P10720 104 aa10.08□□□□□ -0.8
DNMT3A-202ENST00000321117 ORMDL2Q53FV1 153 aa10.08□□□□□ -0.8
DNMT3A-202ENST00000321117 SFTA2Q6UW10 78 aa10.08□□□□□ -0.8
DNMT3A-202ENST00000321117 DKK2Q9UBU2 259 aa10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms