RNA–Protein interactions for RNA: ENST00000299345.10

CDH8-201, Transcript of cadherin 8, humanhuman

TSL 5 BASIC

Gene CDH8, Length 3,728 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8-201ENST00000299345 EBI3Q14213 229 aa10.65□□□□□ -0.71
CDH8-201ENST00000299345 Q8N6K4 173 aa10.65□□□□□ -0.71
CDH8-201ENST00000299345 Q8TAT8 98 aa10.64□□□□□ -0.71
CDH8-201ENST00000299345 FAM110DQ8TAY7 271 aaPredicted RBP10.64□□□□□ -0.71
CDH8-201ENST00000299345 AP5S1Q9NUS5 200 aa10.64□□□□□ -0.71
CDH8-201ENST00000299345 TRAV9-2A0A087WT02 112 aa10.64□□□□□ -0.71
CDH8-201ENST00000299345 NPFFO15130 113 aa10.64□□□□□ -0.71
CDH8-201ENST00000299345 UQCRFS1P47985 274 aa10.64□□□□□ -0.71
CDH8-201ENST00000299345 TMEM191AQ9H0A3 160 aa10.64□□□□□ -0.71
CDH8-201ENST00000299345 HSPB8Q9UJY1 196 aa10.64□□□□□ -0.71
CDH8-201ENST00000299345 LRBAP50851 2863 aa10.64□□□□□ -0.71
CDH8-201ENST00000299345 SH2D1AO60880 128 aa10.63□□□□□ -0.71
CDH8-201ENST00000299345 OR5AL1P0C617 328 aa10.63□□□□□ -0.71
CDH8-201ENST00000299345 RAB9AP51151 201 aa10.63□□□□□ -0.71
CDH8-201ENST00000299345 Q8N976 141 aa10.63□□□□□ -0.71
CDH8-201ENST00000299345 IGHV3-49A0A0A0MS15 119 aa10.63□□□□□ -0.71
CDH8-201ENST00000299345 G3V318 75 aa10.63□□□□□ -0.71
CDH8-201ENST00000299345 APOHP02749 345 aaPredicted RBP10.63□□□□□ -0.71
CDH8-201ENST00000299345 LYZL1Q6UWQ5 148 aa10.63□□□□□ -0.71
CDH8-201ENST00000299345 EEF1AKMT3Q96AZ1 226 aa10.63□□□□□ -0.71
CDH8-201ENST00000299345 OR4C46A6NHA9 309 aa10.63□□□□□ -0.71
CDH8-201ENST00000299345 IGLC3P0DOY3 106 aa10.63□□□□□ -0.71
CDH8-201ENST00000299345 LOC389332A0A1B0GUA5 103 aa10.62□□□□□ -0.71
CDH8-201ENST00000299345 FBLL1A6NHQ2 334 aaKnown RBP10.62□□□□□ -0.71
CDH8-201ENST00000299345 MRPS12O15235 138 aaKnown RBP10.62□□□□□ -0.71
CDH8-201ENST00000299345 COL5A1-AS1Q5SY13 56 aa10.62□□□□□ -0.71
CDH8-201ENST00000299345 IGHV1-24A0A0C4DH33 117 aa10.62□□□□□ -0.71
CDH8-201ENST00000299345 ZNF207O43670 478 aaKnown RBP10.62□□□□□ -0.71
CDH8-201ENST00000299345 MRPL52Q86TS9 123 aaKnown RBP10.62□□□□□ -0.71
CDH8-201ENST00000299345 TMEM219Q86XT9 240 aa10.62□□□□□ -0.71
CDH8-201ENST00000299345 ITLN2Q8WWU7 325 aaPredicted RBP10.62□□□□□ -0.71
CDH8-201ENST00000299345 F8W735 103 aaPredicted RBP10.62□□□□□ -0.71
CDH8-201ENST00000299345 TWIST1Q15672 202 aa10.62□□□□□ -0.71
CDH8-201ENST00000299345 MAJINQ3KP22 176 aa10.62□□□□□ -0.71
CDH8-201ENST00000299345 PRR25Q96S07 402 aa10.62□□□□□ -0.71
CDH8-201ENST00000299345 METTL26Q96S19 204 aa10.62□□□□□ -0.71
CDH8-201ENST00000299345 CRIP1P50238 77 aa10.61□□□□□ -0.71
CDH8-201ENST00000299345 RPS20P60866 119 aaKnown RBP10.61□□□□□ -0.71
CDH8-201ENST00000299345 LMO4P61968 165 aa10.61□□□□□ -0.71
CDH8-201ENST00000299345 HLA-DMBP28068 263 aa10.61□□□□□ -0.71
CDH8-201ENST00000299345 ATP5G2Q06055 141 aa10.61□□□□□ -0.71
CDH8-201ENST00000299345 SYS1-DBNDD2H3BUS1 97 aa10.6□□□□□ -0.71
CDH8-201ENST00000299345 EGR2P11161 476 aaPredicted RBP10.6□□□□□ -0.71
CDH8-201ENST00000299345 VGLL1Q99990 258 aa10.6□□□□□ -0.71
CDH8-201ENST00000299345 LINC00527Q9UJ94 153 aa10.6□□□□□ -0.71
CDH8-201ENST00000299345 LAMTOR2Q9Y2Q5 125 aa10.6□□□□□ -0.71
CDH8-201ENST00000299345 C2orf70A6NJV1 201 aa10.6□□□□□ -0.71
CDH8-201ENST00000299345 FER1L6-AS1Q8NA97 138 aa10.6□□□□□ -0.71
CDH8-201ENST00000299345 ZNF502Q8TBZ5 544 aa10.6□□□□□ -0.71
CDH8-201ENST00000299345 CENPVL3A0A0U1RRI6 287 aa10.6□□□□□ -0.71
CDH8-201ENST00000299345 TMEM213A2RRL7 107 aa10.6□□□□□ -0.71
CDH8-201ENST00000299345 PRELID3AQ96N28 172 aa10.6□□□□□ -0.71
CDH8-201ENST00000299345 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP10.59□□□□□ -0.71
CDH8-201ENST00000299345 CTRLP40313 264 aa10.59□□□□□ -0.71
CDH8-201ENST00000299345 OR10AG1Q8NH19 301 aa10.59□□□□□ -0.71
CDH8-201ENST00000299345 CKS2P33552 79 aa10.59□□□□□ -0.71
CDH8-201ENST00000299345 HINT1P49773 126 aaPredicted RBP10.59□□□□□ -0.71
CDH8-201ENST00000299345 LINC00173Q6ZV60 143 aa10.59□□□□□ -0.71
CDH8-201ENST00000299345 URB1-AS1Q96HZ7 61 aa10.59□□□□□ -0.71
CDH8-201ENST00000299345 PIMREGQ9BSJ6 248 aa10.59□□□□□ -0.71
CDH8-201ENST00000299345 FABP5P3A8MUU1 101 aa10.59□□□□□ -0.71
CDH8-201ENST00000299345 C19orf84I3L1E1 186 aa10.59□□□□□ -0.71
CDH8-201ENST00000299345 BRD3OSQ6XYD6 125 aa10.59□□□□□ -0.71
CDH8-201ENST00000299345 ORMDL3Q8N138 153 aa10.59□□□□□ -0.71
CDH8-201ENST00000299345 D6R8Y8 96 aa10.58□□□□□ -0.72
CDH8-201ENST00000299345 TFPI2P48307 235 aa10.58□□□□□ -0.72
CDH8-201ENST00000299345 AMN1Q8IY45 258 aa10.58□□□□□ -0.72
CDH8-201ENST00000299345 SLC50A1Q9BRV3 221 aa10.58□□□□□ -0.72
CDH8-201ENST00000299345 PIEZO1Q92508 2521 aa10.58□□□□□ -0.72
CDH8-201ENST00000299345 IGLL1P15814 213 aa10.58□□□□□ -0.72
CDH8-201ENST00000299345 TMEM78Q5T7P6 136 aa10.58□□□□□ -0.72
CDH8-201ENST00000299345 PIP4P2Q8N4L2 257 aa10.58□□□□□ -0.72
CDH8-201ENST00000299345 TRAV40A0A0B4J280 105 aa10.58□□□□□ -0.72
CDH8-201ENST00000299345 TRGV3P03979 118 aa10.58□□□□□ -0.72
CDH8-201ENST00000299345 ERCC8Q13216 396 aa10.58□□□□□ -0.72
CDH8-201ENST00000299345 CYB5R2Q6BCY4 276 aa10.58□□□□□ -0.72
CDH8-201ENST00000299345 PMCHL2Q9BQD1 86 aa10.58□□□□□ -0.72
CDH8-201ENST00000299345 MCRIP2Q9BUT9 160 aaKnown RBP10.58□□□□□ -0.72
CDH8-201ENST00000299345 LINC01548A6NM66 108 aa10.57□□□□□ -0.72
CDH8-201ENST00000299345 LY6EQ16553 131 aa10.57□□□□□ -0.72
CDH8-201ENST00000299345 CLEC2AQ6UVW9 174 aa10.57□□□□□ -0.72
CDH8-201ENST00000299345 RNF182Q8N6D2 247 aa10.57□□□□□ -0.72
CDH8-201ENST00000299345 OR8A1Q8NGG7 326 aa10.57□□□□□ -0.72
CDH8-201ENST00000299345 MOB4Q9Y3A3 225 aa10.57□□□□□ -0.72
CDH8-201ENST00000299345 TRBV7-1A0A0A6YYK4 115 aa10.57□□□□□ -0.72
CDH8-201ENST00000299345 TRAV41A0A0B4J266 112 aa10.57□□□□□ -0.72
CDH8-201ENST00000299345 TSPOP30536 169 aa10.57□□□□□ -0.72
CDH8-201ENST00000299345 C16orf54Q6UWD8 224 aa10.57□□□□□ -0.72
CDH8-201ENST00000299345 PET117Q6UWS5 81 aa10.57□□□□□ -0.72
CDH8-201ENST00000299345 CCL19Q99731 98 aa10.57□□□□□ -0.72
CDH8-201ENST00000299345 IGHV4-39P01824 125 aa10.57□□□□□ -0.72
CDH8-201ENST00000299345 RPL11P62913 178 aaKnown RBP10.57□□□□□ -0.72
CDH8-201ENST00000299345 SMAD5-AS1Q9Y6J3 95 aa10.57□□□□□ -0.72
CDH8-201ENST00000299345 BUB3O43684 328 aa10.56□□□□□ -0.72
CDH8-201ENST00000299345 ATP5J2P56134 94 aa10.56□□□□□ -0.72
CDH8-201ENST00000299345 FAM104BQ5XKR9 115 aa10.56□□□□□ -0.72
CDH8-201ENST00000299345 ARL6IP6Q8N6S5 226 aa10.56□□□□□ -0.72
CDH8-201ENST00000299345 hDV102S1A0JD36 115 aa10.56□□□□□ -0.72
CDH8-201ENST00000299345 SMIM15Q7Z3B0 74 aa10.56□□□□□ -0.72
CDH8-201ENST00000299345 C16orf92Q96LL3 132 aa10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms