RNA–Protein interactions for RNA: ENST00000297316.4

SOX17-201, Transcript of SRY-box 17, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SOX17, Length 2,342 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX17-201ENST00000297316 CFHR3Q02985 330 aa16.46■□□□□ 0.23
SOX17-201ENST00000297316 FAM223AQ8IWN6 122 aa16.46■□□□□ 0.23
SOX17-201ENST00000297316 SIGLECL1Q8N7X8 197 aa16.46■□□□□ 0.23
SOX17-201ENST00000297316 NDUFAF3Q9BU61 184 aa16.46■□□□□ 0.23
SOX17-201ENST00000297316 RNF24Q9Y225 148 aa16.46■□□□□ 0.23
SOX17-201ENST00000297316 CLPSL1A2RUU4 121 aa16.45■□□□□ 0.22
SOX17-201ENST00000297316 GRIFINA4D1Z8 144 aa16.45■□□□□ 0.22
SOX17-201ENST00000297316 BMPR1BO00238 502 aa16.45■□□□□ 0.22
SOX17-201ENST00000297316 IGLV1-40P01703 118 aa16.45■□□□□ 0.22
SOX17-201ENST00000297316 S100A7AQ86SG5 101 aa16.45■□□□□ 0.22
SOX17-201ENST00000297316 PRNTQ86SH4 94 aa16.45■□□□□ 0.22
SOX17-201ENST00000297316 LYPD1Q8N2G4 141 aa16.45■□□□□ 0.22
SOX17-201ENST00000297316 ZNF207O43670 478 aaKnown RBP16.44■□□□□ 0.22
SOX17-201ENST00000297316 SMIM12Q96EX1 92 aa16.44■□□□□ 0.22
SOX17-201ENST00000297316 SCGB1D1O95968 90 aa16.44■□□□□ 0.22
SOX17-201ENST00000297316 ANK3Q12955 4377 aaKnown RBP16.43■□□□□ 0.22
SOX17-201ENST00000297316 IGHV3OR16-13A0A075B7E8 117 aa16.43■□□□□ 0.22
SOX17-201ENST00000297316 IGHV3-74A0A0B4J1X5 117 aa16.43■□□□□ 0.22
SOX17-201ENST00000297316 IGHV3-66A0A0C4DH42 116 aa16.43■□□□□ 0.22
SOX17-201ENST00000297316 ZNF785A8K8V0 405 aa16.43■□□□□ 0.22
SOX17-201ENST00000297316 RPL7P18124 248 aaKnown RBP16.43■□□□□ 0.22
SOX17-201ENST00000297316 IGFL4Q6B9Z1 124 aa16.43■□□□□ 0.22
SOX17-201ENST00000297316 MRPL54Q6P161 138 aaKnown RBP16.43■□□□□ 0.22
SOX17-201ENST00000297316 DIRC3C9JPN6 131 aa16.42■□□□□ 0.22
SOX17-201ENST00000297316 APOHP02749 345 aaPredicted RBP16.42■□□□□ 0.22
SOX17-201ENST00000297316 PDE6HQ13956 83 aa16.42■□□□□ 0.22
SOX17-201ENST00000297316 GRAMD2BQ96HH9 432 aa16.42■□□□□ 0.22
SOX17-201ENST00000297316 MRPL18Q9H0U6 180 aaKnown RBP16.42■□□□□ 0.22
SOX17-201ENST00000297316 IGHV3-49A0A0A0MS15 119 aa16.42■□□□□ 0.22
SOX17-201ENST00000297316 C19orf71A6NCJ1 209 aa16.42■□□□□ 0.22
SOX17-201ENST00000297316 RAB4BP61018 213 aa16.42■□□□□ 0.22
SOX17-201ENST00000297316 C2orf88Q9BSF0 95 aa16.42■□□□□ 0.22
SOX17-201ENST00000297316 SNURFLB1AK76 121 aa16.41■□□□□ 0.22
SOX17-201ENST00000297316 HLA-DMBP28068 263 aa16.41■□□□□ 0.22
SOX17-201ENST00000297316 RAB9AP51151 201 aa16.41■□□□□ 0.22
SOX17-201ENST00000297316 ZNF702PQ9H963 129 aa16.41■□□□□ 0.22
SOX17-201ENST00000297316 TP53TG3Q9ULZ0 132 aa16.41■□□□□ 0.22
SOX17-201ENST00000297316 ARL3P36405 182 aa16.41■□□□□ 0.22
SOX17-201ENST00000297316 LBHQ53QV2 105 aaPredicted RBP16.41■□□□□ 0.22
SOX17-201ENST00000297316 TMEM75Q8N9X5 138 aa16.41■□□□□ 0.22
SOX17-201ENST00000297316 H3BUA1 57 aa16.4■□□□□ 0.22
SOX17-201ENST00000297316 BUB3O43684 328 aa16.4■□□□□ 0.22
SOX17-201ENST00000297316 PRSS22Q9GZN4 317 aa16.4■□□□□ 0.22
SOX17-201ENST00000297316 MTORP42345 2549 aa16.4■□□□□ 0.22
SOX17-201ENST00000297316 NF1P21359 2839 aa16.4■□□□□ 0.22
SOX17-201ENST00000297316 IZUMO1RA6ND01 250 aa16.4■□□□□ 0.22
SOX17-201ENST00000297316 IGHG4P01861 327 aa16.4■□□□□ 0.22
SOX17-201ENST00000297316 SSTP61278 116 aa16.4■□□□□ 0.22
SOX17-201ENST00000297316 TMEM136Q6ZRR5 245 aa16.4■□□□□ 0.22
SOX17-201ENST00000297316 NUP35Q8NFH5 326 aa16.4■□□□□ 0.22
SOX17-201ENST00000297316 NEU1Q99519 415 aa16.4■□□□□ 0.22
SOX17-201ENST00000297316 ZNF492Q9P255 531 aa16.4■□□□□ 0.22
SOX17-201ENST00000297316 NAGKQ9UJ70 344 aa16.4■□□□□ 0.22
SOX17-201ENST00000297316 PSG8Q9UQ74 426 aa16.4■□□□□ 0.22
SOX17-201ENST00000297316 TRBV6-1A0A0K0K1D8 114 aa16.39■□□□□ 0.21
SOX17-201ENST00000297316 BRI3O95415 125 aa16.39■□□□□ 0.21
SOX17-201ENST00000297316 PSG3Q16557 428 aa16.39■□□□□ 0.21
SOX17-201ENST00000297316 OR4X2Q8NGF9 303 aa16.39■□□□□ 0.21
SOX17-201ENST00000297316 AAMDCQ9H7C9 122 aa16.39■□□□□ 0.21
SOX17-201ENST00000297316 YAE1D1Q9NRH1 226 aa16.39■□□□□ 0.21
SOX17-201ENST00000297316 LINC00310P59036 64 aa16.39■□□□□ 0.21
SOX17-201ENST00000297316 TSKUQ8WUA8 353 aa16.39■□□□□ 0.21
SOX17-201ENST00000297316 ZC2HC1AQ96GY0 325 aa16.39■□□□□ 0.21
SOX17-201ENST00000297316 USMG5Q96IX5 58 aa16.39■□□□□ 0.21
SOX17-201ENST00000297316 RPP21Q9H633 154 aaKnown RBP16.39■□□□□ 0.21
SOX17-201ENST00000297316 UNQ9165/PRO28630Q6UXU0 137 aa16.38■□□□□ 0.21
SOX17-201ENST00000297316 GNB1LQ9BYB4 327 aa16.38■□□□□ 0.21
SOX17-201ENST00000297316 CRISP2P16562 243 aa16.37■□□□□ 0.21
SOX17-201ENST00000297316 PSMB8P28062 276 aa16.37■□□□□ 0.21
SOX17-201ENST00000297316 TCF24Q7RTU0 167 aa16.37■□□□□ 0.21
SOX17-201ENST00000297316 SMR3AQ99954 134 aa16.37■□□□□ 0.21
SOX17-201ENST00000297316 IGKV2-40A0A087WW87 121 aaPredicted RBP16.37■□□□□ 0.21
SOX17-201ENST00000297316 HIGD1CA8MV81 97 aa16.37■□□□□ 0.21
SOX17-201ENST00000297316 CD5LO43866 347 aa16.37■□□□□ 0.21
SOX17-201ENST00000297316 IGKV2D-40P01614 121 aaPredicted RBP16.37■□□□□ 0.21
SOX17-201ENST00000297316 CD33P20138 364 aa16.37■□□□□ 0.21
SOX17-201ENST00000297316 PSG9Q00887 426 aa16.37■□□□□ 0.21
SOX17-201ENST00000297316 RELQ04864 619 aaPredicted RBP16.37■□□□□ 0.21
SOX17-201ENST00000297316 NPFFR1Q9GZQ6 430 aa16.37■□□□□ 0.21
SOX17-201ENST00000297316 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP16.36■□□□□ 0.21
SOX17-201ENST00000297316 SERF1AO75920 110 aa16.36■□□□□ 0.21
SOX17-201ENST00000297316 P01737 135 aa16.36■□□□□ 0.21
SOX17-201ENST00000297316 C1orf194Q5T5A4 169 aa16.36■□□□□ 0.21
SOX17-201ENST00000297316 EREGO14944 169 aa16.36■□□□□ 0.21
SOX17-201ENST00000297316 GDF5OSQ5U4N7 250 aa16.36■□□□□ 0.21
SOX17-201ENST00000297316 GTSF1Q8WW33 167 aa16.36■□□□□ 0.21
SOX17-201ENST00000297316 ZNF331Q9NQX6 463 aaPredicted RBP16.36■□□□□ 0.21
SOX17-201ENST00000297316 NAT8BQ9UHF3 227 aa16.36■□□□□ 0.21
SOX17-201ENST00000297316 ZNF580Q9UK33 172 aa16.36■□□□□ 0.21
SOX17-201ENST00000297316 ZNF705FA8MVS1 300 aaPredicted RBP16.35■□□□□ 0.21
SOX17-201ENST00000297316 C8orf49Q96NF6 230 aa16.35■□□□□ 0.21
SOX17-201ENST00000297316 OTOGQ6ZRI0 2925 aa16.35■□□□□ 0.21
SOX17-201ENST00000297316 NPIPB6E9PJ23 425 aa16.35■□□□□ 0.21
SOX17-201ENST00000297316 K7EQM0 130 aa16.35■□□□□ 0.21
SOX17-201ENST00000297316 CHEK1O14757 476 aa16.35■□□□□ 0.21
SOX17-201ENST00000297316 RPLP1P05386 114 aaKnown RBP16.35■□□□□ 0.21
SOX17-201ENST00000297316 ZNF705DP0CH99 300 aaPredicted RBP16.35■□□□□ 0.21
SOX17-201ENST00000297316 ZNF705BP0CI00 300 aaPredicted RBP16.35■□□□□ 0.21
SOX17-201ENST00000297316 CRIP1P50238 77 aa16.35■□□□□ 0.21
SOX17-201ENST00000297316 KIAA1644Q3SXP7 199 aa16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 110 ms