RNA–Protein interactions for RNA: ENST00000295927.3

PTX3-201, Transcript of pentraxin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTX3, Length 1,940 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTX3-201ENST00000295927 S100PP25815 95 aa17.39■□□□□ 0.37
PTX3-201ENST00000295927 HOXD3P31249 432 aaPredicted RBP17.39■□□□□ 0.37
PTX3-201ENST00000295927 LINC01006Q8NI28 216 aa17.39■□□□□ 0.37
PTX3-201ENST00000295927 JMJD8Q96S16 334 aa17.39■□□□□ 0.37
PTX3-201ENST00000295927 ZNF705FA8MVS1 300 aaPredicted RBP17.38■□□□□ 0.37
PTX3-201ENST00000295927 FLI1Q01543 452 aaPredicted RBP17.38■□□□□ 0.37
PTX3-201ENST00000295927 KHDC1LQ5JSQ8 128 aa17.38■□□□□ 0.37
PTX3-201ENST00000295927 RNF182Q8N6D2 247 aa17.38■□□□□ 0.37
PTX3-201ENST00000295927 C4orf3Q8WVX3 66 aa17.38■□□□□ 0.37
PTX3-201ENST00000295927 PSG8Q9UQ74 426 aa17.38■□□□□ 0.37
PTX3-201ENST00000295927 V9GYV3 84 aa17.38■□□□□ 0.37
PTX3-201ENST00000295927 TRAV8-2A0A0B4J237 113 aa17.37■□□□□ 0.37
PTX3-201ENST00000295927 SERTM2A0A1B0GWG4 89 aa17.37■□□□□ 0.37
PTX3-201ENST00000295927 SYNJ2BPP57105 145 aa17.37■□□□□ 0.37
PTX3-201ENST00000295927 DEFB136Q30KP8 78 aa17.37■□□□□ 0.37
PTX3-201ENST00000295927 IBA57Q5T440 356 aaKnown RBP17.37■□□□□ 0.37
PTX3-201ENST00000295927 LCN12Q6JVE5 192 aa17.37■□□□□ 0.37
PTX3-201ENST00000295927 REC114Q7Z4M0 266 aa17.37■□□□□ 0.37
PTX3-201ENST00000295927 HIVEP1P15822 2718 aa17.37■□□□□ 0.37
PTX3-201ENST00000295927 IGKV2-40A0A087WW87 121 aaPredicted RBP17.37■□□□□ 0.37
PTX3-201ENST00000295927 TMEM213A2RRL7 107 aa17.37■□□□□ 0.37
PTX3-201ENST00000295927 IGKV2D-40P01614 121 aaPredicted RBP17.37■□□□□ 0.37
PTX3-201ENST00000295927 TRBV24-1A0A075B6N3 115 aa17.36■□□□□ 0.37
PTX3-201ENST00000295927 LGALS9O00182 355 aa17.36■□□□□ 0.37
PTX3-201ENST00000295927 FOLR2P14207 255 aa17.36■□□□□ 0.37
PTX3-201ENST00000295927 HIST2H2BDQ6DRA6 164 aa17.36■□□□□ 0.37
PTX3-201ENST00000295927 PRR27Q6MZM9 219 aa17.36■□□□□ 0.37
PTX3-201ENST00000295927 TMEM183AQ8IXX5 376 aa17.36■□□□□ 0.37
PTX3-201ENST00000295927 IMMP2LQ96T52 175 aa17.36■□□□□ 0.37
PTX3-201ENST00000295927 A8MWP6 167 aa17.35■□□□□ 0.37
PTX3-201ENST00000295927 FAM3BP58499 235 aaPredicted RBP17.35■□□□□ 0.37
PTX3-201ENST00000295927 KCNIP4Q6PIL6 250 aa17.35■□□□□ 0.37
PTX3-201ENST00000295927 FAM210BQ96KR6 192 aa17.35■□□□□ 0.37
PTX3-201ENST00000295927 FAM231DQ6ZW35 169 aa17.35■□□□□ 0.37
PTX3-201ENST00000295927 C16orf92Q96LL3 132 aa17.35■□□□□ 0.37
PTX3-201ENST00000295927 ASCL2Q99929 193 aa17.35■□□□□ 0.37
PTX3-201ENST00000295927 PYGO2Q9BRQ0 406 aa17.35■□□□□ 0.37
PTX3-201ENST00000295927 FLNBO75369 2602 aaKnown RBP17.34■□□□□ 0.37
PTX3-201ENST00000295927 RPL11P62913 178 aaKnown RBP17.34■□□□□ 0.37
PTX3-201ENST00000295927 FOXL1Q12952 345 aa17.34■□□□□ 0.37
PTX3-201ENST00000295927 C1QL4Q86Z23 238 aa17.34■□□□□ 0.37
PTX3-201ENST00000295927 KLHL30-AS1Q8NEE0 82 aa17.34■□□□□ 0.37
PTX3-201ENST00000295927 IL36BQ9NZH7 164 aa17.34■□□□□ 0.37
PTX3-201ENST00000295927 ZFP30Q9Y2G7 519 aa17.34■□□□□ 0.37
PTX3-201ENST00000295927 SELENOKQ9Y6D0 94 aa17.34■□□□□ 0.37
PTX3-201ENST00000295927 A0A1W2PPQ1 181 aa17.33■□□□□ 0.37
PTX3-201ENST00000295927 PRAC2D3DTV9 90 aa17.33■□□□□ 0.37
PTX3-201ENST00000295927 LINC01619G3V211 115 aa17.33■□□□□ 0.37
PTX3-201ENST00000295927 SLURP1P55000 103 aa17.33■□□□□ 0.37
PTX3-201ENST00000295927 KLF5Q13887 457 aaPredicted RBP17.33■□□□□ 0.37
PTX3-201ENST00000295927 NUDT10Q8NFP7 164 aa17.33■□□□□ 0.37
PTX3-201ENST00000295927 OR11H1Q8NG94 326 aa17.33■□□□□ 0.37
PTX3-201ENST00000295927 NUDT11Q96G61 164 aa17.33■□□□□ 0.37
PTX3-201ENST00000295927 NDUFA7O95182 113 aa17.33■□□□□ 0.36
PTX3-201ENST00000295927 RPS10P46783 165 aaKnown RBP17.33■□□□□ 0.36
PTX3-201ENST00000295927 C11orf44Q8N8P7 122 aa17.33■□□□□ 0.36
PTX3-201ENST00000295927 NRN1Q9NPD7 142 aa17.33■□□□□ 0.36
PTX3-201ENST00000295927 CD28P10747 220 aa17.32■□□□□ 0.36
PTX3-201ENST00000295927 BMI1P35226 326 aa17.32■□□□□ 0.36
PTX3-201ENST00000295927 LINC00322Q6ZN03 302 aaPredicted RBP17.32■□□□□ 0.36
PTX3-201ENST00000295927 TCF24Q7RTU0 167 aa17.32■□□□□ 0.36
PTX3-201ENST00000295927 OR1N2Q8NGR9 330 aa17.32■□□□□ 0.36
PTX3-201ENST00000295927 WFDC12Q8WWY7 111 aa17.32■□□□□ 0.36
PTX3-201ENST00000295927 DPF1Q92782 380 aa17.32■□□□□ 0.36
PTX3-201ENST00000295927 MRPL53Q96EL3 112 aaKnown RBP17.32■□□□□ 0.36
PTX3-201ENST00000295927 VGLL1Q99990 258 aa17.32■□□□□ 0.36
PTX3-201ENST00000295927 BIN3Q9NQY0 253 aa17.32■□□□□ 0.36
PTX3-201ENST00000295927 NSD1Q96L73 2696 aaPredicted RBP17.32■□□□□ 0.36
PTX3-201ENST00000295927 ZNF705GA8MUZ8 300 aaPredicted RBP17.31■□□□□ 0.36
PTX3-201ENST00000295927 SOCS3O14543 225 aa17.31■□□□□ 0.36
PTX3-201ENST00000295927 DUX3Q96PT4 197 aa17.31■□□□□ 0.36
PTX3-201ENST00000295927 CLEC5AQ9NY25 188 aa17.31■□□□□ 0.36
PTX3-201ENST00000295927 IGKV3-7A0A075B6H7 116 aa17.31■□□□□ 0.36
PTX3-201ENST00000295927 HAX1O00165 279 aa17.31■□□□□ 0.36
PTX3-201ENST00000295927 GATCO43716 136 aaKnown RBP17.31■□□□□ 0.36
PTX3-201ENST00000295927 ZNF492Q9P255 531 aa17.31■□□□□ 0.36
PTX3-201ENST00000295927 MLXQ9UH92 298 aa17.31■□□□□ 0.36
PTX3-201ENST00000295927 FBLL1A6NHQ2 334 aaKnown RBP17.3■□□□□ 0.36
PTX3-201ENST00000295927 ZC2HC1AQ96GY0 325 aa17.3■□□□□ 0.36
PTX3-201ENST00000295927 C19orf71A6NCJ1 209 aa17.29■□□□□ 0.36
PTX3-201ENST00000295927 C2orf70A6NJV1 201 aa17.29■□□□□ 0.36
PTX3-201ENST00000295927 C20orf173Q96LM9 149 aa17.29■□□□□ 0.36
PTX3-201ENST00000295927 RBAKDNA6NC62 111 aa17.29■□□□□ 0.36
PTX3-201ENST00000295927 TCF21O43680 179 aa17.29■□□□□ 0.36
PTX3-201ENST00000295927 CBLN1P23435 193 aa17.29■□□□□ 0.36
PTX3-201ENST00000295927 ERCC8Q13216 396 aa17.29■□□□□ 0.36
PTX3-201ENST00000295927 C8orf49Q96NF6 230 aa17.29■□□□□ 0.36
PTX3-201ENST00000295927 C1orf196B1AJZ1 125 aa17.28■□□□□ 0.36
PTX3-201ENST00000295927 CA1P00915 261 aaPredicted RBP17.28■□□□□ 0.36
PTX3-201ENST00000295927 GBGT1Q8N5D6 347 aa17.28■□□□□ 0.36
PTX3-201ENST00000295927 Q8TAT8 98 aa17.28■□□□□ 0.36
PTX3-201ENST00000295927 RNF114Q9Y508 228 aa17.28■□□□□ 0.36
PTX3-201ENST00000295927 PRR25Q96S07 402 aa17.27■□□□□ 0.36
PTX3-201ENST00000295927 CITED2Q99967 270 aaPredicted RBP17.27■□□□□ 0.36
PTX3-201ENST00000295927 FN1P02751 2386 aaKnown RBP17.27■□□□□ 0.36
PTX3-201ENST00000295927 A0A1W2PRX2 142 aa17.27■□□□□ 0.35
PTX3-201ENST00000295927 CRLF1O75462 422 aa17.27■□□□□ 0.35
PTX3-201ENST00000295927 ZFP82Q8N141 532 aa17.27■□□□□ 0.35
PTX3-201ENST00000295927 DAZAP1Q96EP5 407 aaKnown RBP17.27■□□□□ 0.35
PTX3-201ENST00000295927 SRSF2Q01130 221 aaKnown RBP17.26■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms