RNA–Protein interactions for RNA: ENST00000295522.3

CLDN1-201, Transcript of claudin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLDN1, Length 3,481 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN1-201ENST00000295522 RAB9BQ9NP90 201 aa8.1□□□□□ -1.11
CLDN1-201ENST00000295522 MSRB1Q9NZV6 116 aa8.1□□□□□ -1.11
CLDN1-201ENST00000295522 LY6G6EA0A0G2JKS1 128 aa8.1□□□□□ -1.11
CLDN1-201ENST00000295522 LINC01549A6NIU2 74 aa8.1□□□□□ -1.11
CLDN1-201ENST00000295522 CLEC3BP05452 202 aa8.1□□□□□ -1.11
CLDN1-201ENST00000295522 GAGE5Q13069 117 aa8.1□□□□□ -1.11
CLDN1-201ENST00000295522 GAGE6Q13070 117 aa8.1□□□□□ -1.11
CLDN1-201ENST00000295522 TMEM75Q8N9X5 138 aa8.1□□□□□ -1.11
CLDN1-201ENST00000295522 DEFB104AQ8WTQ1 72 aa8.1□□□□□ -1.11
CLDN1-201ENST00000295522 NDUFA4L2Q9NRX3 87 aa8.1□□□□□ -1.11
CLDN1-201ENST00000295522 U3KQA8 63 aa8.1□□□□□ -1.11
CLDN1-201ENST00000295522 WISP2O76076 250 aa8.09□□□□□ -1.11
CLDN1-201ENST00000295522 GAS8-AS1O95177 125 aa8.09□□□□□ -1.11
CLDN1-201ENST00000295522 MYOZ3Q8TDC0 251 aa8.09□□□□□ -1.11
CLDN1-201ENST00000295522 KIR2DL4Q99706 377 aa8.09□□□□□ -1.11
CLDN1-201ENST00000295522 OTORQ9NRC9 128 aa8.09□□□□□ -1.11
CLDN1-201ENST00000295522 PTPRBP23467 1997 aa8.09□□□□□ -1.11
CLDN1-201ENST00000295522 PTPRZ1P23471 2315 aaPredicted RBP8.09□□□□□ -1.11
CLDN1-201ENST00000295522 K7ESF4 209 aa8.09□□□□□ -1.11
CLDN1-201ENST00000295522 IGFL4Q6B9Z1 124 aa8.09□□□□□ -1.11
CLDN1-201ENST00000295522 ZNF562Q6V9R5 426 aa8.09□□□□□ -1.11
CLDN1-201ENST00000295522 ZNF502Q8TBZ5 544 aa8.09□□□□□ -1.11
CLDN1-201ENST00000295522 RASL11BQ9BPW5 248 aa8.09□□□□□ -1.11
CLDN1-201ENST00000295522 C1QTNF4Q9BXJ3 329 aa8.09□□□□□ -1.11
CLDN1-201ENST00000295522 MED13LQ71F56 2210 aa8.09□□□□□ -1.11
CLDN1-201ENST00000295522 IGHV3OR16-8A0A075B7F1 116 aa8.09□□□□□ -1.11
CLDN1-201ENST00000295522 A0A1B0GW15 77 aa8.09□□□□□ -1.11
CLDN1-201ENST00000295522 OR11H12B2RN74 326 aa8.09□□□□□ -1.11
CLDN1-201ENST00000295522 MYCNOSP40205 109 aa8.09□□□□□ -1.11
CLDN1-201ENST00000295522 ODF1Q14990 250 aa8.09□□□□□ -1.11
CLDN1-201ENST00000295522 TTC32Q5I0X7 151 aa8.09□□□□□ -1.11
CLDN1-201ENST00000295522 OR11H1Q8NG94 326 aa8.09□□□□□ -1.11
CLDN1-201ENST00000295522 OR11H2Q8NH07 326 aa8.09□□□□□ -1.11
CLDN1-201ENST00000295522 TMEM133Q9H2Q1 129 aa8.09□□□□□ -1.11
CLDN1-201ENST00000295522 A0A1W2PPI3 338 aa8.08□□□□□ -1.12
CLDN1-201ENST00000295522 SRRM5B3KS81 715 aa8.08□□□□□ -1.12
CLDN1-201ENST00000295522 GP9P14770 177 aa8.08□□□□□ -1.12
CLDN1-201ENST00000295522 TMEM164Q5U3C3 297 aa8.08□□□□□ -1.12
CLDN1-201ENST00000295522 C6orf15Q6UXA7 325 aaPredicted RBP8.08□□□□□ -1.12
CLDN1-201ENST00000295522 DLX4Q92988 240 aaPredicted RBP8.08□□□□□ -1.12
CLDN1-201ENST00000295522 VKORC1Q9BQB6 163 aa8.08□□□□□ -1.12
CLDN1-201ENST00000295522 TRGV5A0A0B4J1U4 118 aa8.08□□□□□ -1.12
CLDN1-201ENST00000295522 TRAV8-2A0A0B4J237 113 aa8.08□□□□□ -1.12
CLDN1-201ENST00000295522 KLRC4-KLRK1H3BQV0 150 aa8.08□□□□□ -1.12
CLDN1-201ENST00000295522 M0R1B8 84 aa8.08□□□□□ -1.12
CLDN1-201ENST00000295522 TMEM105Q8N8V8 129 aa8.08□□□□□ -1.12
CLDN1-201ENST00000295522 SLC25A39Q9BZJ4 359 aaPredicted RBP8.08□□□□□ -1.12
CLDN1-201ENST00000295522 AAMDCQ9H7C9 122 aa8.08□□□□□ -1.12
CLDN1-201ENST00000295522 ERG28Q9UKR5 140 aa8.08□□□□□ -1.12
CLDN1-201ENST00000295522 AKAP6Q13023 2319 aa8.08□□□□□ -1.12
CLDN1-201ENST00000295522 IGKV2-40A0A087WW87 121 aaPredicted RBP8.08□□□□□ -1.12
CLDN1-201ENST00000295522 IGKV2D-40P01614 121 aaPredicted RBP8.08□□□□□ -1.12
CLDN1-201ENST00000295522 ZFP2Q6ZN57 461 aa8.08□□□□□ -1.12
CLDN1-201ENST00000295522 NFE4Q86UQ8 179 aa8.08□□□□□ -1.12
CLDN1-201ENST00000295522 PHLDA1Q8WV24 401 aaPredicted RBP8.08□□□□□ -1.12
CLDN1-201ENST00000295522 CFAP47Q6ZTR5 3102 aa8.07□□□□□ -1.12
CLDN1-201ENST00000295522 EFNA4P52798 201 aa8.07□□□□□ -1.12
CLDN1-201ENST00000295522 MZT1Q08AG7 82 aa8.07□□□□□ -1.12
CLDN1-201ENST00000295522 VMA21Q3ZAQ7 101 aa8.07□□□□□ -1.12
CLDN1-201ENST00000295522 C8orf46Q8TAG6 207 aa8.07□□□□□ -1.12
CLDN1-201ENST00000295522 LINC01548A6NM66 108 aa8.07□□□□□ -1.12
CLDN1-201ENST00000295522 C10orf142B7Z368 130 aa8.07□□□□□ -1.12
CLDN1-201ENST00000295522 SH2D1AO60880 128 aa8.07□□□□□ -1.12
CLDN1-201ENST00000295522 HLA-DRB4P13762 266 aa8.07□□□□□ -1.12
CLDN1-201ENST00000295522 KLRD1Q13241 179 aa8.07□□□□□ -1.12
CLDN1-201ENST00000295522 ATP1A1-AS1Q5TC04 95 aa8.07□□□□□ -1.12
CLDN1-201ENST00000295522 CDIP1Q9H305 208 aa8.07□□□□□ -1.12
CLDN1-201ENST00000295522 HLA-DRB4X5D2U9 266 aa8.07□□□□□ -1.12
CLDN1-201ENST00000295522 IGHV3-35A0A0C4DH35 117 aa8.06□□□□□ -1.12
CLDN1-201ENST00000295522 SNCGO76070 127 aa8.06□□□□□ -1.12
CLDN1-201ENST00000295522 DLX1P56177 255 aa8.06□□□□□ -1.12
CLDN1-201ENST00000295522 ZCCHC24Q8N2G6 241 aaKnown RBP8.06□□□□□ -1.12
CLDN1-201ENST00000295522 ZNF436-AS1Q8NC38 126 aaPredicted RBP8.06□□□□□ -1.12
CLDN1-201ENST00000295522 OR4C13Q8NGP0 309 aa8.06□□□□□ -1.12
CLDN1-201ENST00000295522 SPTBN1Q01082 2364 aaKnown RBP8.06□□□□□ -1.12
CLDN1-201ENST00000295522 WI2-2373I1.2A0A1W2PRP0 233 aa8.06□□□□□ -1.12
CLDN1-201ENST00000295522 LAMTOR5O43504 91 aa8.06□□□□□ -1.12
CLDN1-201ENST00000295522 CRIP1P50238 77 aa8.06□□□□□ -1.12
CLDN1-201ENST00000295522 ATP5IP56385 69 aaPredicted RBP8.06□□□□□ -1.12
CLDN1-201ENST00000295522 NBASA2RRP1 2371 aa8.06□□□□□ -1.12
CLDN1-201ENST00000295522 TRBV7-9A0A0J9YWB2 115 aa8.06□□□□□ -1.12
CLDN1-201ENST00000295522 RPL27AP46776 148 aaKnown RBP8.06□□□□□ -1.12
CLDN1-201ENST00000295522 GAGE2BQ13066 116 aa8.06□□□□□ -1.12
CLDN1-201ENST00000295522 GAGE2EQ4V326 116 aa8.06□□□□□ -1.12
CLDN1-201ENST00000295522 TM2D2Q9BX73 214 aa8.06□□□□□ -1.12
CLDN1-201ENST00000295522 HIF1ANQ9NWT6 349 aa8.06□□□□□ -1.12
CLDN1-201ENST00000295522 GAGE2DQ9UEU5 116 aa8.06□□□□□ -1.12
CLDN1-201ENST00000295522 HHLA3Q9XRX5 114 aa8.06□□□□□ -1.12
CLDN1-201ENST00000295522 TRAV26-2A0A0B4J265 109 aa8.05□□□□□ -1.12
CLDN1-201ENST00000295522 TNFRSF6BO95407 300 aa8.05□□□□□ -1.12
CLDN1-201ENST00000295522 CCL8P80075 99 aa8.05□□□□□ -1.12
CLDN1-201ENST00000295522 C5orf64Q2M2E5 130 aa8.05□□□□□ -1.12
CLDN1-201ENST00000295522 Q6AWC8 147 aa8.05□□□□□ -1.12
CLDN1-201ENST00000295522 C1orf210Q8IVY1 113 aa8.05□□□□□ -1.12
CLDN1-201ENST00000295522 SCNM1Q9BWG6 230 aa8.05□□□□□ -1.12
CLDN1-201ENST00000295522 NGBQ9NPG2 151 aa8.05□□□□□ -1.12
CLDN1-201ENST00000295522 HIGD1BQ9P298 99 aa8.05□□□□□ -1.12
CLDN1-201ENST00000295522 LINC00312Q9Y6C7 94 aa8.05□□□□□ -1.12
CLDN1-201ENST00000295522 DSCAMO60469 2012 aa8.05□□□□□ -1.12
CLDN1-201ENST00000295522 RIF1Q5UIP0 2472 aaKnown RBP8.05□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 78.3 ms