RNA–Protein interactions for RNA: ENST00000293861.7

SNRNP25-201, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 25, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene SNRNP25, Length 1,905 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP25-201ENST00000293861 ZNF785A8K8V0 405 aa16.54■□□□□ 0.24
SNRNP25-201ENST00000293861 SPINK4O60575 86 aa16.54■□□□□ 0.24
SNRNP25-201ENST00000293861 IGHG4P01861 327 aa16.54■□□□□ 0.24
SNRNP25-201ENST00000293861 HLA-DQA1P01909 254 aa16.54■□□□□ 0.24
SNRNP25-201ENST00000293861 SLC35B1P78383 322 aa16.54■□□□□ 0.24
SNRNP25-201ENST00000293861 PDZD11Q5EBL8 140 aa16.54■□□□□ 0.24
SNRNP25-201ENST00000293861 SLC50A1Q9BRV3 221 aa16.54■□□□□ 0.24
SNRNP25-201ENST00000293861 KLK15Q9H2R5 256 aa16.54■□□□□ 0.24
SNRNP25-201ENST00000293861 HIGD1CA8MV81 97 aa16.53■□□□□ 0.24
SNRNP25-201ENST00000293861 MRPL54Q6P161 138 aaKnown RBP16.53■□□□□ 0.24
SNRNP25-201ENST00000293861 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa16.53■□□□□ 0.24
SNRNP25-201ENST00000293861 COX8CQ7Z4L0 72 aa16.53■□□□□ 0.24
SNRNP25-201ENST00000293861 ATP5L2Q7Z4Y8 100 aa16.53■□□□□ 0.24
SNRNP25-201ENST00000293861 ZC2HC1AQ96GY0 325 aa16.53■□□□□ 0.24
SNRNP25-201ENST00000293861 HIST1H2BLQ99880 126 aa16.53■□□□□ 0.24
SNRNP25-201ENST00000293861 CHEK1O14757 476 aa16.53■□□□□ 0.24
SNRNP25-201ENST00000293861 APOHP02749 345 aaPredicted RBP16.53■□□□□ 0.24
SNRNP25-201ENST00000293861 TMEM89A2RUT3 159 aa16.52■□□□□ 0.23
SNRNP25-201ENST00000293861 FABP4P15090 132 aa16.51■□□□□ 0.23
SNRNP25-201ENST00000293861 Q71RC1 249 aaPredicted RBP16.51■□□□□ 0.23
SNRNP25-201ENST00000293861 OR10D4PQ8NGN7 298 aa16.51■□□□□ 0.23
SNRNP25-201ENST00000293861 TRBV12-3P01733 135 aa16.51■□□□□ 0.23
SNRNP25-201ENST00000293861 FAM209BQ5JX69 171 aa16.51■□□□□ 0.23
SNRNP25-201ENST00000293861 SAPCD1Q5SSQ6 148 aa16.5■□□□□ 0.23
SNRNP25-201ENST00000293861 LCN12Q6JVE5 192 aa16.5■□□□□ 0.23
SNRNP25-201ENST00000293861 OR4X2Q8NGF9 303 aa16.5■□□□□ 0.23
SNRNP25-201ENST00000293861 ZANQ9Y493 2812 aa16.5■□□□□ 0.23
SNRNP25-201ENST00000293861 A0A1B0GXF2 115 aa16.49■□□□□ 0.23
SNRNP25-201ENST00000293861 AMBPP02760 352 aa16.49■□□□□ 0.23
SNRNP25-201ENST00000293861 GTSF1Q8WW33 167 aa16.49■□□□□ 0.23
SNRNP25-201ENST00000293861 FOXC2Q99958 501 aa16.49■□□□□ 0.23
SNRNP25-201ENST00000293861 IGKV2-40A0A087WW87 121 aaPredicted RBP16.49■□□□□ 0.23
SNRNP25-201ENST00000293861 IGHV3-66A0A0C4DH42 116 aa16.49■□□□□ 0.23
SNRNP25-201ENST00000293861 HOXA3O43365 443 aaPredicted RBP16.49■□□□□ 0.23
SNRNP25-201ENST00000293861 ZNF207O43670 478 aaKnown RBP16.49■□□□□ 0.23
SNRNP25-201ENST00000293861 IGKV2D-40P01614 121 aaPredicted RBP16.49■□□□□ 0.23
SNRNP25-201ENST00000293861 CRISP2P16562 243 aa16.49■□□□□ 0.23
SNRNP25-201ENST00000293861 PSMB8P28062 276 aa16.49■□□□□ 0.23
SNRNP25-201ENST00000293861 FOXA3P55318 350 aaPredicted RBP16.49■□□□□ 0.23
SNRNP25-201ENST00000293861 Q0VG73 95 aa16.49■□□□□ 0.23
SNRNP25-201ENST00000293861 TMEM95Q3KNT9 176 aa16.49■□□□□ 0.23
SNRNP25-201ENST00000293861 TCF24Q7RTU0 167 aa16.49■□□□□ 0.23
SNRNP25-201ENST00000293861 GLMPQ8WWB7 406 aa16.49■□□□□ 0.23
SNRNP25-201ENST00000293861 MRPL53Q96EL3 112 aaKnown RBP16.49■□□□□ 0.23
SNRNP25-201ENST00000293861 NPFFR1Q9GZQ6 430 aa16.49■□□□□ 0.23
SNRNP25-201ENST00000293861 HELZ2Q9BYK8 2649 aaKnown RBP16.48■□□□□ 0.23
SNRNP25-201ENST00000293861 RBAKDNA6NC62 111 aa16.48■□□□□ 0.23
SNRNP25-201ENST00000293861 IGHV3-11P01762 117 aa16.48■□□□□ 0.23
SNRNP25-201ENST00000293861 HLA-DMBP28068 263 aa16.48■□□□□ 0.23
SNRNP25-201ENST00000293861 CRIP1P50238 77 aa16.48■□□□□ 0.23
SNRNP25-201ENST00000293861 RBPMS2Q6ZRY4 209 aaKnown RBP16.48■□□□□ 0.23
SNRNP25-201ENST00000293861 OR2D3Q8NGH3 330 aa16.48■□□□□ 0.23
SNRNP25-201ENST00000293861 PACRGQ96M98 296 aaPredicted RBP16.48■□□□□ 0.23
SNRNP25-201ENST00000293861 CT45A10P0DMU9 189 aa16.47■□□□□ 0.23
SNRNP25-201ENST00000293861 RAB4BP61018 213 aa16.47■□□□□ 0.23
SNRNP25-201ENST00000293861 UNQ9165/PRO28630Q6UXU0 137 aa16.47■□□□□ 0.23
SNRNP25-201ENST00000293861 PRR25Q96S07 402 aa16.47■□□□□ 0.23
SNRNP25-201ENST00000293861 CLEC5AQ9NY25 188 aa16.47■□□□□ 0.23
SNRNP25-201ENST00000293861 IGHV3OR16-13A0A075B7E8 117 aa16.47■□□□□ 0.23
SNRNP25-201ENST00000293861 IGHV3-74A0A0B4J1X5 117 aa16.47■□□□□ 0.23
SNRNP25-201ENST00000293861 PYY3Q5JQD4 70 aa16.47■□□□□ 0.23
SNRNP25-201ENST00000293861 IGFL4Q6B9Z1 124 aa16.47■□□□□ 0.23
SNRNP25-201ENST00000293861 C8orf49Q96NF6 230 aa16.47■□□□□ 0.23
SNRNP25-201ENST00000293861 IGHV3-49A0A0A0MS15 119 aa16.46■□□□□ 0.23
SNRNP25-201ENST00000293861 GRIFINA4D1Z8 144 aa16.46■□□□□ 0.23
SNRNP25-201ENST00000293861 TMEM18Q96B42 140 aa16.46■□□□□ 0.23
SNRNP25-201ENST00000293861 ZNF705FA8MVS1 300 aaPredicted RBP16.45■□□□□ 0.22
SNRNP25-201ENST00000293861 SMAD7O15105 426 aaKnown RBP16.45■□□□□ 0.22
SNRNP25-201ENST00000293861 APCSP02743 223 aa16.45■□□□□ 0.22
SNRNP25-201ENST00000293861 ESDP10768 282 aa16.45■□□□□ 0.22
SNRNP25-201ENST00000293861 C8orf86Q6ZUL3 223 aa16.45■□□□□ 0.22
SNRNP25-201ENST00000293861 VGLL1Q99990 258 aa16.45■□□□□ 0.22
SNRNP25-201ENST00000293861 ZNF702PQ9H963 129 aa16.45■□□□□ 0.22
SNRNP25-201ENST00000293861 TP53TG3Q9ULZ0 132 aa16.45■□□□□ 0.22
SNRNP25-201ENST00000293861 TRAV8-2A0A0B4J237 113 aa16.45■□□□□ 0.22
SNRNP25-201ENST00000293861 GDF5OSQ5U4N7 250 aa16.45■□□□□ 0.22
SNRNP25-201ENST00000293861 LCNL1Q6ZST4 164 aa16.45■□□□□ 0.22
SNRNP25-201ENST00000293861 TMEM256Q8N2U0 113 aa16.45■□□□□ 0.22
SNRNP25-201ENST00000293861 ASCL2Q99929 193 aa16.45■□□□□ 0.22
SNRNP25-201ENST00000293861 PRB4P10163 310 aaPredicted RBP16.44■□□□□ 0.22
SNRNP25-201ENST00000293861 HBBP68871 147 aa16.44■□□□□ 0.22
SNRNP25-201ENST00000293861 OR10J3Q5JRS4 329 aa16.44■□□□□ 0.22
SNRNP25-201ENST00000293861 NIT2Q9NQR4 276 aa16.44■□□□□ 0.22
SNRNP25-201ENST00000293861 PEF1Q9UBV8 284 aaKnown RBP16.44■□□□□ 0.22
SNRNP25-201ENST00000293861 A0A1W2PS18 150 aa16.43■□□□□ 0.22
SNRNP25-201ENST00000293861 SLAQ13239 276 aa16.43■□□□□ 0.22
SNRNP25-201ENST00000293861 TMEM86BQ8N661 226 aa16.43■□□□□ 0.22
SNRNP25-201ENST00000293861 PGLYRP4Q96LB8 373 aa16.43■□□□□ 0.22
SNRNP25-201ENST00000293861 ITPR3Q14573 2671 aa16.43■□□□□ 0.22
SNRNP25-201ENST00000293861 A0A1B0GUS0 222 aa16.43■□□□□ 0.22
SNRNP25-201ENST00000293861 A8MWP6 167 aa16.43■□□□□ 0.22
SNRNP25-201ENST00000293861 DNLZQ5SXM8 178 aa16.43■□□□□ 0.22
SNRNP25-201ENST00000293861 SIGLECL1Q8N7X8 197 aa16.43■□□□□ 0.22
SNRNP25-201ENST00000293861 NBPF19A0A087WUL8 3843 aa16.42■□□□□ 0.22
SNRNP25-201ENST00000293861 FAM162BQ5T6X4 162 aa16.42■□□□□ 0.22
SNRNP25-201ENST00000293861 Q6AWC8 147 aa16.42■□□□□ 0.22
SNRNP25-201ENST00000293861 RNF182Q8N6D2 247 aa16.42■□□□□ 0.22
SNRNP25-201ENST00000293861 PRAC2D3DTV9 90 aa16.41■□□□□ 0.22
SNRNP25-201ENST00000293861 NUPR1O60356 82 aa16.41■□□□□ 0.22
SNRNP25-201ENST00000293861 LINC00310P59036 64 aa16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 107.7 ms