RNA–Protein interactions for RNA: ENST00000277657.12

CCDC7-201, Transcript of coiled-coil domain containing 7, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC7, Length 1,899 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-201ENST00000277657 NUDT10Q8NFP7 164 aa16.84■□□□□ 0.29
CCDC7-201ENST00000277657 NUDT11Q96G61 164 aa16.84■□□□□ 0.29
CCDC7-201ENST00000277657 A0A1W2PS18 150 aa16.84■□□□□ 0.29
CCDC7-201ENST00000277657 CHEK1O14757 476 aa16.84■□□□□ 0.29
CCDC7-201ENST00000277657 HLA-DMBP28068 263 aa16.84■□□□□ 0.29
CCDC7-201ENST00000277657 PRR27Q6MZM9 219 aa16.84■□□□□ 0.29
CCDC7-201ENST00000277657 GRAMD2BQ96HH9 432 aa16.84■□□□□ 0.29
CCDC7-201ENST00000277657 ZNF492Q9P255 531 aa16.84■□□□□ 0.29
CCDC7-201ENST00000277657 IGHV7-4-1A0A0J9YVY3 117 aa16.83■□□□□ 0.28
CCDC7-201ENST00000277657 ZNF705GA8MUZ8 300 aaPredicted RBP16.83■□□□□ 0.28
CCDC7-201ENST00000277657 TRGC2P03986 189 aa16.83■□□□□ 0.28
CCDC7-201ENST00000277657 C8orf86Q6ZUL3 223 aa16.83■□□□□ 0.28
CCDC7-201ENST00000277657 KLHDC1Q8N7A1 406 aa16.83■□□□□ 0.28
CCDC7-201ENST00000277657 NOTCH2Q04721 2471 aa16.83■□□□□ 0.28
CCDC7-201ENST00000277657 C19orf71A6NCJ1 209 aa16.82■□□□□ 0.28
CCDC7-201ENST00000277657 PHOX2AO14813 284 aa16.82■□□□□ 0.28
CCDC7-201ENST00000277657 TM4SF20Q53R12 229 aa16.82■□□□□ 0.28
CCDC7-201ENST00000277657 LCN12Q6JVE5 192 aa16.82■□□□□ 0.28
CCDC7-201ENST00000277657 LINC00322Q6ZN03 302 aaPredicted RBP16.82■□□□□ 0.28
CCDC7-201ENST00000277657 TRAV8-2A0A0B4J237 113 aa16.82■□□□□ 0.28
CCDC7-201ENST00000277657 SMIM27A0A1W2PRY6 76 aa16.82■□□□□ 0.28
CCDC7-201ENST00000277657 FBLL1A6NHQ2 334 aaKnown RBP16.82■□□□□ 0.28
CCDC7-201ENST00000277657 GATCO43716 136 aaKnown RBP16.82■□□□□ 0.28
CCDC7-201ENST00000277657 PRB4P10163 310 aaPredicted RBP16.82■□□□□ 0.28
CCDC7-201ENST00000277657 Q71RC1 249 aaPredicted RBP16.82■□□□□ 0.28
CCDC7-201ENST00000277657 SMR3AQ99954 134 aa16.82■□□□□ 0.28
CCDC7-201ENST00000277657 IGKV2-40A0A087WW87 121 aaPredicted RBP16.81■□□□□ 0.28
CCDC7-201ENST00000277657 IGKV2D-40P01614 121 aaPredicted RBP16.81■□□□□ 0.28
CCDC7-201ENST00000277657 ZNF705FA8MVS1 300 aaPredicted RBP16.8■□□□□ 0.28
CCDC7-201ENST00000277657 MRPL53Q96EL3 112 aaKnown RBP16.8■□□□□ 0.28
CCDC7-201ENST00000277657 RHPN1-AS1Q9BWJ2 59 aa16.8■□□□□ 0.28
CCDC7-201ENST00000277657 SMPXQ9UHP9 88 aa16.8■□□□□ 0.28
CCDC7-201ENST00000277657 UFC1Q9Y3C8 167 aa16.8■□□□□ 0.28
CCDC7-201ENST00000277657 CUBNO60494 3623 aa16.8■□□□□ 0.28
CCDC7-201ENST00000277657 RNF182Q8N6D2 247 aa16.8■□□□□ 0.28
CCDC7-201ENST00000277657 CLEC5AQ9NY25 188 aa16.8■□□□□ 0.28
CCDC7-201ENST00000277657 RNASE1P07998 156 aaKnown RBP16.79■□□□□ 0.28
CCDC7-201ENST00000277657 MTORP42345 2549 aa16.78■□□□□ 0.28
CCDC7-201ENST00000277657 CA1P00915 261 aaPredicted RBP16.78■□□□□ 0.28
CCDC7-201ENST00000277657 COX8CQ7Z4L0 72 aa16.78■□□□□ 0.28
CCDC7-201ENST00000277657 REC114Q7Z4M0 266 aa16.78■□□□□ 0.28
CCDC7-201ENST00000277657 ZC2HC1AQ96GY0 325 aa16.78■□□□□ 0.28
CCDC7-201ENST00000277657 IGHV4OR15-8A0A075B7B6 117 aa16.78■□□□□ 0.28
CCDC7-201ENST00000277657 A0A087WW49 117 aa16.78■□□□□ 0.28
CCDC7-201ENST00000277657 RBAKDNA6NC62 111 aa16.78■□□□□ 0.28
CCDC7-201ENST00000277657 NPIPB6E9PJ23 425 aa16.78■□□□□ 0.28
CCDC7-201ENST00000277657 LY6G6DO95868 133 aa16.78■□□□□ 0.28
CCDC7-201ENST00000277657 SRD5A1P18405 259 aa16.78■□□□□ 0.28
CCDC7-201ENST00000277657 CDX1P47902 265 aaPredicted RBP16.78■□□□□ 0.28
CCDC7-201ENST00000277657 TCTEX1D4Q5JR98 221 aa16.78■□□□□ 0.28
CCDC7-201ENST00000277657 VGLL1Q99990 258 aa16.78■□□□□ 0.28
CCDC7-201ENST00000277657 NF1P21359 2839 aa16.78■□□□□ 0.28
CCDC7-201ENST00000277657 A8MWP6 167 aa16.77■□□□□ 0.27
CCDC7-201ENST00000277657 PRAC2D3DTV9 90 aa16.77■□□□□ 0.27
CCDC7-201ENST00000277657 CT83Q5H943 113 aa16.77■□□□□ 0.27
CCDC7-201ENST00000277657 GBGT1Q8N5D6 347 aa16.77■□□□□ 0.27
CCDC7-201ENST00000277657 WIPF2Q8TF74 440 aaPredicted RBP16.77■□□□□ 0.27
CCDC7-201ENST00000277657 FRZBQ92765 325 aa16.77■□□□□ 0.27
CCDC7-201ENST00000277657 RPP21Q9H633 154 aaKnown RBP16.77■□□□□ 0.27
CCDC7-201ENST00000277657 TMEM213A2RRL7 107 aa16.76■□□□□ 0.27
CCDC7-201ENST00000277657 LGALS9O00182 355 aa16.76■□□□□ 0.27
CCDC7-201ENST00000277657 SOCS3O14543 225 aa16.76■□□□□ 0.27
CCDC7-201ENST00000277657 P01737 135 aa16.76■□□□□ 0.27
CCDC7-201ENST00000277657 ACTL10Q5JWF8 245 aa16.76■□□□□ 0.27
CCDC7-201ENST00000277657 TSKUQ8WUA8 353 aa16.76■□□□□ 0.27
CCDC7-201ENST00000277657 ASCL2Q99929 193 aa16.76■□□□□ 0.27
CCDC7-201ENST00000277657 HIST1H2BKO60814 126 aa16.76■□□□□ 0.27
CCDC7-201ENST00000277657 HIST1H2BJP06899 126 aa16.76■□□□□ 0.27
CCDC7-201ENST00000277657 HIST1H2BOP23527 126 aa16.76■□□□□ 0.27
CCDC7-201ENST00000277657 HIST1H2BBP33778 126 aa16.76■□□□□ 0.27
CCDC7-201ENST00000277657 TCL1AP56279 114 aa16.76■□□□□ 0.27
CCDC7-201ENST00000277657 HIST1H2BDP58876 126 aa16.76■□□□□ 0.27
CCDC7-201ENST00000277657 HIST1H2BCP62807 126 aa16.76■□□□□ 0.27
CCDC7-201ENST00000277657 HIST2H2BEQ16778 126 aa16.76■□□□□ 0.27
CCDC7-201ENST00000277657 HIST2H2BFQ5QNW6 126 aaPredicted RBP16.76■□□□□ 0.27
CCDC7-201ENST00000277657 SAPCD1Q5SSQ6 148 aa16.76■□□□□ 0.27
CCDC7-201ENST00000277657 ZNF418Q8TF45 676 aaPredicted RBP16.76■□□□□ 0.27
CCDC7-201ENST00000277657 HIST1H2BHQ93079 126 aa16.76■□□□□ 0.27
CCDC7-201ENST00000277657 DAZAP1Q96EP5 407 aaKnown RBP16.76■□□□□ 0.27
CCDC7-201ENST00000277657 C16orf92Q96LL3 132 aa16.76■□□□□ 0.27
CCDC7-201ENST00000277657 HIST1H2BNQ99877 126 aa16.76■□□□□ 0.27
CCDC7-201ENST00000277657 HIST1H2BMQ99879 126 aa16.76■□□□□ 0.27
CCDC7-201ENST00000277657 EDN2P20800 178 aa16.75■□□□□ 0.27
CCDC7-201ENST00000277657 HOXD3P31249 432 aaPredicted RBP16.75■□□□□ 0.27
CCDC7-201ENST00000277657 HILS1P60008 231 aa16.75■□□□□ 0.27
CCDC7-201ENST00000277657 PRR25Q96S07 402 aa16.75■□□□□ 0.27
CCDC7-201ENST00000277657 NRN1Q9NPD7 142 aa16.75■□□□□ 0.27
CCDC7-201ENST00000277657 HIVEP2P31629 2446 aa16.75■□□□□ 0.27
CCDC7-201ENST00000277657 C5orf52A6NGY3 159 aa16.74■□□□□ 0.27
CCDC7-201ENST00000277657 S100A6P06703 90 aa16.74■□□□□ 0.27
CCDC7-201ENST00000277657 CRIP1P50238 77 aa16.74■□□□□ 0.27
CCDC7-201ENST00000277657 C8orf49Q96NF6 230 aa16.74■□□□□ 0.27
CCDC7-201ENST00000277657 IZUMO1RA6ND01 250 aa16.73■□□□□ 0.27
CCDC7-201ENST00000277657 TRGC1P0CF51 173 aa16.73■□□□□ 0.27
CCDC7-201ENST00000277657 C18orf65Q6ZTR6 163 aa16.73■□□□□ 0.27
CCDC7-201ENST00000277657 OR4B1Q8NGF8 309 aa16.73■□□□□ 0.27
CCDC7-201ENST00000277657 C4orf3Q8WVX3 66 aa16.73■□□□□ 0.27
CCDC7-201ENST00000277657 C16orf95Q9H693 158 aa16.73■□□□□ 0.27
CCDC7-201ENST00000277657 BMI1P35226 326 aa16.73■□□□□ 0.27
CCDC7-201ENST00000277657 SYNJ2BPP57105 145 aa16.73■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 121.3 ms