RNA–Protein interactions for RNA: ENST00000273482.10

TRPC1-201, Transcript of transient receptor potential cation channel subfamily C member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TRPC1, Length 4,324 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPC1-201ENST00000273482 LINC00527Q9UJ94 153 aa13.73□□□□□ -0.21
TRPC1-201ENST00000273482 NDUFA4L2Q9NRX3 87 aa13.72□□□□□ -0.21
TRPC1-201ENST00000273482 DLX6P56179 175 aa13.72□□□□□ -0.21
TRPC1-201ENST00000273482 CFHR2P36980 270 aa13.72□□□□□ -0.21
TRPC1-201ENST00000273482 OR10J6PQ8NGY7 276 aa13.72□□□□□ -0.21
TRPC1-201ENST00000273482 ZNF492Q9P255 531 aa13.72□□□□□ -0.21
TRPC1-201ENST00000273482 SMKR1H3BMG3 65 aa13.71□□□□□ -0.21
TRPC1-201ENST00000273482 RAB9AP51151 201 aa13.71□□□□□ -0.21
TRPC1-201ENST00000273482 TRAV40A0A0B4J280 105 aa13.71□□□□□ -0.21
TRPC1-201ENST00000273482 NDUFS7O75251 213 aa13.71□□□□□ -0.21
TRPC1-201ENST00000273482 COX8AP10176 69 aa13.71□□□□□ -0.21
TRPC1-201ENST00000273482 C17orf58Q2M2W7 97 aa13.71□□□□□ -0.21
TRPC1-201ENST00000273482 C11orf53Q8IXP5 236 aa13.71□□□□□ -0.21
TRPC1-201ENST00000273482 IGKV2-40A0A087WW87 121 aaPredicted RBP13.71□□□□□ -0.22
TRPC1-201ENST00000273482 SRRM4A7MD48 611 aaKnown RBP13.71□□□□□ -0.22
TRPC1-201ENST00000273482 K7EP13 123 aa13.71□□□□□ -0.22
TRPC1-201ENST00000273482 NBR2O15453 112 aa13.71□□□□□ -0.22
TRPC1-201ENST00000273482 IGKV2D-40P01614 121 aaPredicted RBP13.71□□□□□ -0.22
TRPC1-201ENST00000273482 MTURNQ8N3F0 131 aa13.71□□□□□ -0.22
TRPC1-201ENST00000273482 Q8NA96 180 aa13.71□□□□□ -0.22
TRPC1-201ENST00000273482 PRSS2P07478 247 aa13.7□□□□□ -0.22
TRPC1-201ENST00000273482 ZC2HC1BQ5TFG8 222 aa13.7□□□□□ -0.22
TRPC1-201ENST00000273482 WT1-ASQ06250 92 aa13.7□□□□□ -0.22
TRPC1-201ENST00000273482 GATA4P43694 442 aa13.7□□□□□ -0.22
TRPC1-201ENST00000273482 FAM71F2Q6NXP2 309 aa13.7□□□□□ -0.22
TRPC1-201ENST00000273482 BRD3OSQ6XYD6 125 aa13.7□□□□□ -0.22
TRPC1-201ENST00000273482 DEFB125Q8N687 156 aa13.7□□□□□ -0.22
TRPC1-201ENST00000273482 WIPF2Q8TF74 440 aaPredicted RBP13.7□□□□□ -0.22
TRPC1-201ENST00000273482 PSG3Q16557 428 aa13.69□□□□□ -0.22
TRPC1-201ENST00000273482 GAGE13Q4V321 117 aa13.69□□□□□ -0.22
TRPC1-201ENST00000273482 ARPC1AQ92747 370 aa13.69□□□□□ -0.22
TRPC1-201ENST00000273482 TNRC6AQ8NDV7 1962 aaKnown RBP13.69□□□□□ -0.22
TRPC1-201ENST00000273482 PLXNB1O43157 2135 aa13.69□□□□□ -0.22
TRPC1-201ENST00000273482 H3BRM9 83 aa13.69□□□□□ -0.22
TRPC1-201ENST00000273482 HTN1P15515 57 aa13.69□□□□□ -0.22
TRPC1-201ENST00000273482 TMEM170BQ5T4T1 132 aa13.69□□□□□ -0.22
TRPC1-201ENST00000273482 FXYD5Q96DB9 178 aa13.69□□□□□ -0.22
TRPC1-201ENST00000273482 C9orf118A6NHY6 69 aa13.68□□□□□ -0.22
TRPC1-201ENST00000273482 KLF17Q5JT82 389 aaPredicted RBP13.68□□□□□ -0.22
TRPC1-201ENST00000273482 LINC00173Q6ZV60 143 aa13.68□□□□□ -0.22
TRPC1-201ENST00000273482 KMT2EQ8IZD2 1858 aa13.68□□□□□ -0.22
TRPC1-201ENST00000273482 KLF5Q13887 457 aaPredicted RBP13.68□□□□□ -0.22
TRPC1-201ENST00000273482 Q8TAT8 98 aa13.68□□□□□ -0.22
TRPC1-201ENST00000273482 TMEM213A2RRL7 107 aa13.68□□□□□ -0.22
TRPC1-201ENST00000273482 TMEM219Q86XT9 240 aa13.68□□□□□ -0.22
TRPC1-201ENST00000273482 IGHV1-3A0A0C4DH29 117 aa13.68□□□□□ -0.22
TRPC1-201ENST00000273482 LGALS3P17931 250 aaKnown RBP13.67□□□□□ -0.22
TRPC1-201ENST00000273482 MSMPQ1L6U9 139 aa13.67□□□□□ -0.22
TRPC1-201ENST00000273482 IGHV3-11P01762 117 aa13.67□□□□□ -0.22
TRPC1-201ENST00000273482 POU2AF1Q16633 256 aa13.67□□□□□ -0.22
TRPC1-201ENST00000273482 DGAT2L7PQ6IED9 249 aa13.67□□□□□ -0.22
TRPC1-201ENST00000273482 VMO1Q7Z5L0 202 aa13.67□□□□□ -0.22
TRPC1-201ENST00000273482 SZT2Q5T011 3432 aa13.67□□□□□ -0.22
TRPC1-201ENST00000273482 HAX1O00165 279 aa13.67□□□□□ -0.22
TRPC1-201ENST00000273482 SH2D1AO60880 128 aa13.67□□□□□ -0.22
TRPC1-201ENST00000273482 TRGV3P03979 118 aa13.67□□□□□ -0.22
TRPC1-201ENST00000273482 SIGLEC9Q9Y336 463 aa13.67□□□□□ -0.22
TRPC1-201ENST00000273482 PRB1P04280 392 aa13.66□□□□□ -0.22
TRPC1-201ENST00000273482 NAV3Q8IVL0 2385 aa13.66□□□□□ -0.22
TRPC1-201ENST00000273482 MORN5Q5VZ52 161 aa13.66□□□□□ -0.22
TRPC1-201ENST00000273482 PRSS57Q6UWY2 283 aa13.66□□□□□ -0.22
TRPC1-201ENST00000273482 BEX4Q9NWD9 120 aaPredicted RBP13.66□□□□□ -0.22
TRPC1-201ENST00000273482 MAPK1IP1LQ8NDC0 245 aa13.66□□□□□ -0.22
TRPC1-201ENST00000273482 SMPXQ9UHP9 88 aa13.66□□□□□ -0.22
TRPC1-201ENST00000273482 KIR2DL4Q99706 377 aa13.66□□□□□ -0.22
TRPC1-201ENST00000273482 JMJD1CQ15652 2540 aa13.65□□□□□ -0.22
TRPC1-201ENST00000273482 P0C879 139 aa13.65□□□□□ -0.22
TRPC1-201ENST00000273482 SSBP2P81877 361 aaPredicted RBP13.65□□□□□ -0.22
TRPC1-201ENST00000273482 TP53TG3Q9ULZ0 132 aa13.65□□□□□ -0.22
TRPC1-201ENST00000273482 LOXP28300 417 aaPredicted RBP13.65□□□□□ -0.22
TRPC1-201ENST00000273482 C3orf36Q3SXR2 165 aa13.65□□□□□ -0.22
TRPC1-201ENST00000273482 TTC32Q5I0X7 151 aa13.65□□□□□ -0.22
TRPC1-201ENST00000273482 ADAMTSL5Q6ZMM2 481 aa13.65□□□□□ -0.22
TRPC1-201ENST00000273482 CHAC1Q9BUX1 264 aa13.65□□□□□ -0.22
TRPC1-201ENST00000273482 HIVEP2P31629 2446 aa13.65□□□□□ -0.22
TRPC1-201ENST00000273482 SHISA9B4DS77 424 aa13.65□□□□□ -0.22
TRPC1-201ENST00000273482 HOXA3O43365 443 aaPredicted RBP13.65□□□□□ -0.22
TRPC1-201ENST00000273482 Q8TCH9 128 aa13.65□□□□□ -0.22
TRPC1-201ENST00000273482 SRSF1Q07955 248 aaKnown RBP eCLIP13.64□□□□□ -0.23
TRPC1-201ENST00000273482 ATP5G2Q06055 141 aa13.64□□□□□ -0.23
TRPC1-201ENST00000273482 C22orf34Q6ZV56 151 aa13.64□□□□□ -0.23
TRPC1-201ENST00000273482 BUB1B-PAK6H3BSN5 160 aa13.64□□□□□ -0.23
TRPC1-201ENST00000273482 COX6CP09669 75 aa13.64□□□□□ -0.23
TRPC1-201ENST00000273482 FAM74A4Q5TZK3 123 aa13.64□□□□□ -0.23
TRPC1-201ENST00000273482 TMEM158Q8WZ71 300 aa13.64□□□□□ -0.23
TRPC1-201ENST00000273482 TNFRSF14Q92956 283 aa13.64□□□□□ -0.23
TRPC1-201ENST00000273482 BPTFQ12830 3046 aa13.64□□□□□ -0.23
TRPC1-201ENST00000273482 BRWD1-AS2P59051 145 aa13.63□□□□□ -0.23
TRPC1-201ENST00000273482 FAM104BQ5XKR9 115 aa13.63□□□□□ -0.23
TRPC1-201ENST00000273482 LYPD1Q8N2G4 141 aa13.63□□□□□ -0.23
TRPC1-201ENST00000273482 NUP210LQ5VU65 1888 aa13.63□□□□□ -0.23
TRPC1-201ENST00000273482 TMEM155Q4W5P6 130 aa13.63□□□□□ -0.23
TRPC1-201ENST00000273482 ZNF747Q9BV97 191 aa13.63□□□□□ -0.23
TRPC1-201ENST00000273482 IGKV1OR2-108A0A075B7D4 117 aa13.63□□□□□ -0.23
TRPC1-201ENST00000273482 K7EP34 96 aa13.63□□□□□ -0.23
TRPC1-201ENST00000273482 IGFL4Q6B9Z1 124 aa13.63□□□□□ -0.23
TRPC1-201ENST00000273482 CLEC19AQ6UXS0 136 aa13.63□□□□□ -0.23
TRPC1-201ENST00000273482 CYSLTR1Q9Y271 337 aa13.63□□□□□ -0.23
TRPC1-201ENST00000273482 DIAPH2-AS1Q14236 149 aa13.63□□□□□ -0.23
TRPC1-201ENST00000273482 JMJD8Q96S16 334 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 95.4 ms