RNA–Protein interactions for RNA: ENST00000270061.11

SSBP4-201, Transcript of single stranded DNA binding protein 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SSBP4, Length 1,768 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-201ENST00000270061 IGF2BP2-AS1Q96M15 143 aa18.7■□□□□ 0.58
SSBP4-201ENST00000270061 AURKAIP1Q9NWT8 199 aaPredicted RBP18.7■□□□□ 0.58
SSBP4-201ENST00000270061 PEF1Q9UBV8 284 aaKnown RBP18.7■□□□□ 0.58
SSBP4-201ENST00000270061 PGPEP1LA6NFU8 196 aa18.69■□□□□ 0.58
SSBP4-201ENST00000270061 ZNF253O75346 499 aa18.69■□□□□ 0.58
SSBP4-201ENST00000270061 S100A9P06702 114 aaKnown RBP18.69■□□□□ 0.58
SSBP4-201ENST00000270061 OR5B12Q96R08 314 aa18.69■□□□□ 0.58
SSBP4-201ENST00000270061 SMAD5-AS1Q9Y6J3 95 aa18.69■□□□□ 0.58
SSBP4-201ENST00000270061 TMEM183BQ1AE95 376 aa18.68■□□□□ 0.58
SSBP4-201ENST00000270061 A0A087X0K7 114 aa18.68■□□□□ 0.58
SSBP4-201ENST00000270061 TCRAP04437 139 aa18.68■□□□□ 0.58
SSBP4-201ENST00000270061 GNG5P63218 68 aa18.68■□□□□ 0.58
SSBP4-201ENST00000270061 PSG9Q00887 426 aa18.68■□□□□ 0.58
SSBP4-201ENST00000270061 FHL3Q13643 280 aa18.68■□□□□ 0.58
SSBP4-201ENST00000270061 TMA7Q9Y2S6 64 aaKnown RBP18.68■□□□□ 0.58
SSBP4-201ENST00000270061 PPP1R2P9O14990 202 aa18.67■□□□□ 0.58
SSBP4-201ENST00000270061 HOXD3P31249 432 aaPredicted RBP18.67■□□□□ 0.58
SSBP4-201ENST00000270061 EXOC3-AS1Q8N2X6 119 aa18.67■□□□□ 0.58
SSBP4-201ENST00000270061 ARL6IP6Q8N6S5 226 aa18.67■□□□□ 0.58
SSBP4-201ENST00000270061 MRAPQ8TCY5 172 aa18.67■□□□□ 0.58
SSBP4-201ENST00000270061 K7EN84 100 aa18.66■□□□□ 0.58
SSBP4-201ENST00000270061 SLC17A3O00476 420 aa18.66■□□□□ 0.58
SSBP4-201ENST00000270061 FAM24BQ8N5W8 94 aa18.66■□□□□ 0.58
SSBP4-201ENST00000270061 OR1N2Q8NGR9 330 aa18.66■□□□□ 0.58
SSBP4-201ENST00000270061 LINC00479Q96M42 142 aa18.66■□□□□ 0.58
SSBP4-201ENST00000270061 H7BYZ3 331 aa18.65■□□□□ 0.58
SSBP4-201ENST00000270061 IGLV2-8P01709 118 aa18.65■□□□□ 0.58
SSBP4-201ENST00000270061 ATF4P18848 351 aaPredicted RBP18.65■□□□□ 0.58
SSBP4-201ENST00000270061 EGFEM1PQ0D2K5 195 aa18.65■□□□□ 0.58
SSBP4-201ENST00000270061 UNQ9165/PRO28630Q6UXU0 137 aa18.65■□□□□ 0.58
SSBP4-201ENST00000270061 CMTM2Q8TAZ6 248 aa18.65■□□□□ 0.58
SSBP4-201ENST00000270061 SFRP2Q96HF1 295 aa18.65■□□□□ 0.58
SSBP4-201ENST00000270061 GALR1P47211 349 aa18.65■□□□□ 0.58
SSBP4-201ENST00000270061 KRTAP10-11P60412 298 aa18.65■□□□□ 0.58
SSBP4-201ENST00000270061 ELOBQ15370 118 aa18.65■□□□□ 0.58
SSBP4-201ENST00000270061 SMIM12Q96EX1 92 aa18.65■□□□□ 0.58
SSBP4-201ENST00000270061 FMC1Q96HJ9 113 aa18.65■□□□□ 0.58
SSBP4-201ENST00000270061 ISLRO14498 428 aa18.64■□□□□ 0.57
SSBP4-201ENST00000270061 GCGP01275 180 aa18.64■□□□□ 0.57
SSBP4-201ENST00000270061 APOHP02749 345 aaPredicted RBP18.64■□□□□ 0.57
SSBP4-201ENST00000270061 GPHB5Q86YW7 130 aa18.64■□□□□ 0.57
SSBP4-201ENST00000270061 AAMDCQ9H7C9 122 aa18.64■□□□□ 0.57
SSBP4-201ENST00000270061 C16orf54Q6UWD8 224 aa18.63■□□□□ 0.57
SSBP4-201ENST00000270061 TRAV34A0A0B4J273 112 aa18.63■□□□□ 0.57
SSBP4-201ENST00000270061 TRBV6-1A0A0K0K1D8 114 aa18.63■□□□□ 0.57
SSBP4-201ENST00000270061 ZNF207O43670 478 aaKnown RBP18.63■□□□□ 0.57
SSBP4-201ENST00000270061 MEOX2P50222 304 aa18.63■□□□□ 0.57
SSBP4-201ENST00000270061 UBE2G1P62253 170 aa18.63■□□□□ 0.57
SSBP4-201ENST00000270061 LGALS1P09382 135 aaKnown RBP18.62■□□□□ 0.57
SSBP4-201ENST00000270061 BAGE2Q86Y30 109 aa18.62■□□□□ 0.57
SSBP4-201ENST00000270061 ZNF785A8K8V0 405 aa18.61■□□□□ 0.57
SSBP4-201ENST00000270061 K7EMT4 169 aa18.61■□□□□ 0.57
SSBP4-201ENST00000270061 PFN1P07737 140 aaKnown RBP18.61■□□□□ 0.57
SSBP4-201ENST00000270061 FOLR2P14207 255 aa18.61■□□□□ 0.57
SSBP4-201ENST00000270061 FAM106AQ4KMX7 169 aa18.61■□□□□ 0.57
SSBP4-201ENST00000270061 OR10G8Q8NGN5 311 aa18.61■□□□□ 0.57
SSBP4-201ENST00000270061 GLMPQ8WWB7 406 aa18.61■□□□□ 0.57
SSBP4-201ENST00000270061 ZNF331Q9NQX6 463 aaPredicted RBP18.61■□□□□ 0.57
SSBP4-201ENST00000270061 SORL1Q92673 2214 aa18.61■□□□□ 0.57
SSBP4-201ENST00000270061 A0A1W2PS18 150 aa18.6■□□□□ 0.57
SSBP4-201ENST00000270061 C9orf66Q5T8R8 295 aa18.6■□□□□ 0.57
SSBP4-201ENST00000270061 IMMP2LQ96T52 175 aa18.6■□□□□ 0.57
SSBP4-201ENST00000270061 ZMAT5Q9UDW3 170 aaKnown RBP18.6■□□□□ 0.57
SSBP4-201ENST00000270061 RPH3ALQ9UNE2 315 aa18.6■□□□□ 0.57
SSBP4-201ENST00000270061 SERTM2A0A1B0GWG4 89 aa18.6■□□□□ 0.57
SSBP4-201ENST00000270061 URGCP-MRPS24S4R325 110 aa18.6■□□□□ 0.57
SSBP4-201ENST00000270061 IGHV3-66A0A0C4DH42 116 aa18.59■□□□□ 0.57
SSBP4-201ENST00000270061 DIRC3C9JPN6 131 aa18.59■□□□□ 0.57
SSBP4-201ENST00000270061 LINC01619G3V211 115 aa18.59■□□□□ 0.57
SSBP4-201ENST00000270061 LTAP01374 205 aa18.59■□□□□ 0.57
SSBP4-201ENST00000270061 RAB5AP20339 215 aa18.59■□□□□ 0.57
SSBP4-201ENST00000270061 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa18.59■□□□□ 0.57
SSBP4-201ENST00000270061 TMEM75Q8N9X5 138 aa18.59■□□□□ 0.57
SSBP4-201ENST00000270061 SLC50A1Q9BRV3 221 aa18.59■□□□□ 0.57
SSBP4-201ENST00000270061 OSTCQ9NRP0 149 aa18.59■□□□□ 0.57
SSBP4-201ENST00000270061 TRBV24-1A0A075B6N3 115 aa18.58■□□□□ 0.57
SSBP4-201ENST00000270061 K7EQM0 130 aa18.58■□□□□ 0.57
SSBP4-201ENST00000270061 CSN1S1P47710 185 aa18.58■□□□□ 0.57
SSBP4-201ENST00000270061 OR5I1Q13606 314 aa18.58■□□□□ 0.57
SSBP4-201ENST00000270061 GOLT1AQ6ZVE7 132 aa18.58■□□□□ 0.57
SSBP4-201ENST00000270061 GRAMD2BQ96HH9 432 aa18.58■□□□□ 0.57
SSBP4-201ENST00000270061 MLST8Q9BVC4 326 aa18.58■□□□□ 0.57
SSBP4-201ENST00000270061 DAZ1Q9NQZ3 744 aaKnown RBP18.58■□□□□ 0.57
SSBP4-201ENST00000270061 IGHV3OR16-13A0A075B7E8 117 aa18.58■□□□□ 0.56
SSBP4-201ENST00000270061 IGHV3-49A0A0A0MS15 119 aa18.58■□□□□ 0.56
SSBP4-201ENST00000270061 IGHV3-74A0A0B4J1X5 117 aa18.58■□□□□ 0.56
SSBP4-201ENST00000270061 ZNF320A2RRD8 509 aa18.58■□□□□ 0.56
SSBP4-201ENST00000270061 K7EIL1 84 aa18.58■□□□□ 0.56
SSBP4-201ENST00000270061 IGLV2-11P01706 119 aa18.58■□□□□ 0.56
SSBP4-201ENST00000270061 S100PP25815 95 aa18.58■□□□□ 0.56
SSBP4-201ENST00000270061 IGHV4OR15-8A0A075B7B6 117 aa18.57■□□□□ 0.56
SSBP4-201ENST00000270061 A0A087WW49 117 aa18.57■□□□□ 0.56
SSBP4-201ENST00000270061 CXCL1P09341 107 aa18.57■□□□□ 0.56
SSBP4-201ENST00000270061 PYGO2Q9BRQ0 406 aa18.57■□□□□ 0.56
SSBP4-201ENST00000270061 IGHV7-4-1A0A0J9YVY3 117 aa18.56■□□□□ 0.56
SSBP4-201ENST00000270061 M0R3E3 92 aa18.56■□□□□ 0.56
SSBP4-201ENST00000270061 SLURP1P55000 103 aa18.56■□□□□ 0.56
SSBP4-201ENST00000270061 ERVFC1-1P60608 527 aa18.56■□□□□ 0.56
SSBP4-201ENST00000270061 RPEL1Q2QD12 228 aa18.56■□□□□ 0.56
SSBP4-201ENST00000270061 UFC1Q9Y3C8 167 aa18.56■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 172.3 ms