RNA–Protein interactions for RNA: ENST00000263708.6

PTPN4-201, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPN4, Length 10,300 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-201ENST00000263708 CTHRC1Q96CG8 243 aa9.29□□□□□ -0.92
PTPN4-201ENST00000263708 TMEM178BH3BS89 294 aa9.28□□□□□ -0.92
PTPN4-201ENST00000263708 LINC00271P0C7V0 271 aa9.28□□□□□ -0.92
PTPN4-201ENST00000263708 CD200R1LQ6Q8B3 271 aa9.28□□□□□ -0.92
PTPN4-201ENST00000263708 Q96MF0 132 aa9.28□□□□□ -0.92
PTPN4-201ENST00000263708 SMIM10L1P0DMW3 83 aa9.28□□□□□ -0.92
PTPN4-201ENST00000263708 ID3Q02535 119 aa9.28□□□□□ -0.92
PTPN4-201ENST00000263708 SMIM10Q96HG1 83 aa9.28□□□□□ -0.92
PTPN4-201ENST00000263708 HIST1H2BLQ99880 126 aa9.28□□□□□ -0.92
PTPN4-201ENST00000263708 TREML4Q6UXN2 200 aa9.28□□□□□ -0.92
PTPN4-201ENST00000263708 ZNF883P0CG24 379 aa9.28□□□□□ -0.92
PTPN4-201ENST00000263708 SAA4P35542 130 aa9.28□□□□□ -0.92
PTPN4-201ENST00000263708 ZC2HC1BQ5TFG8 222 aa9.28□□□□□ -0.92
PTPN4-201ENST00000263708 SYS1-DBNDD2H3BUS1 97 aa9.28□□□□□ -0.92
PTPN4-201ENST00000263708 OVOL3O00110 214 aa9.28□□□□□ -0.92
PTPN4-201ENST00000263708 GREB1LQ9C091 1923 aaPredicted RBP9.28□□□□□ -0.92
PTPN4-201ENST00000263708 IGKV1-39P01597 117 aa9.28□□□□□ -0.92
PTPN4-201ENST00000263708 IGKV1D-39P04432 117 aa9.28□□□□□ -0.92
PTPN4-201ENST00000263708 A0A1W2PR77 199 aa9.28□□□□□ -0.92
PTPN4-201ENST00000263708 EFNA2O43921 213 aa9.28□□□□□ -0.92
PTPN4-201ENST00000263708 USF3Q68DE3 2245 aa9.27□□□□□ -0.93
PTPN4-201ENST00000263708 M0R1W7 72 aa9.27□□□□□ -0.93
PTPN4-201ENST00000263708 MPV17L2Q567V2 206 aa9.27□□□□□ -0.93
PTPN4-201ENST00000263708 LYZL4Q96KX0 146 aa9.27□□□□□ -0.93
PTPN4-201ENST00000263708 C8orf49Q96NF6 230 aa9.27□□□□□ -0.93
PTPN4-201ENST00000263708 MRPS18CQ9Y3D5 142 aaKnown RBP9.27□□□□□ -0.93
PTPN4-201ENST00000263708 TRAV12-2A0A075B6T6 113 aa9.27□□□□□ -0.93
PTPN4-201ENST00000263708 CFHR1Q03591 330 aa9.27□□□□□ -0.93
PTPN4-201ENST00000263708 STPG4Q8N801 248 aa9.27□□□□□ -0.93
PTPN4-201ENST00000263708 SLC25A16P16260 332 aa9.27□□□□□ -0.93
PTPN4-201ENST00000263708 ATRAIDQ6UW56 229 aa9.27□□□□□ -0.93
PTPN4-201ENST00000263708 ZNRF2Q8NHG8 242 aa9.26□□□□□ -0.93
PTPN4-201ENST00000263708 WFDC1Q9HC57 220 aa9.26□□□□□ -0.93
PTPN4-201ENST00000263708 XCL1P47992 114 aa9.26□□□□□ -0.93
PTPN4-201ENST00000263708 BPESC1Q9GZL8 116 aa9.26□□□□□ -0.93
PTPN4-201ENST00000263708 H0YJW9 148 aa9.26□□□□□ -0.93
PTPN4-201ENST00000263708 IL18BPO95998 194 aa9.26□□□□□ -0.93
PTPN4-201ENST00000263708 LY6HO94772 140 aa9.26□□□□□ -0.93
PTPN4-201ENST00000263708 UBE2CO00762 179 aa9.26□□□□□ -0.93
PTPN4-201ENST00000263708 GREM1O60565 184 aa9.26□□□□□ -0.93
PTPN4-201ENST00000263708 IGHG2P01859 326 aa9.26□□□□□ -0.93
PTPN4-201ENST00000263708 TRAV13-2A0A0B4J235 113 aa9.26□□□□□ -0.93
PTPN4-201ENST00000263708 CFHR2P36980 270 aa9.26□□□□□ -0.93
PTPN4-201ENST00000263708 ZNF503Q96F45 646 aa9.26□□□□□ -0.93
PTPN4-201ENST00000263708 TRAV3A0A0B4J244 114 aa9.25□□□□□ -0.93
PTPN4-201ENST00000263708 UTF1Q5T230 341 aa9.25□□□□□ -0.93
PTPN4-201ENST00000263708 RNF126Q9BV68 326 aa9.25□□□□□ -0.93
PTPN4-201ENST00000263708 FGF6P10767 208 aa9.25□□□□□ -0.93
PTPN4-201ENST00000263708 RNASE13Q5GAN3 156 aaKnown RBP9.25□□□□□ -0.93
PTPN4-201ENST00000263708 PRSS57Q6UWY2 283 aa9.25□□□□□ -0.93
PTPN4-201ENST00000263708 ARMS2P0C7Q2 107 aa9.25□□□□□ -0.93
PTPN4-201ENST00000263708 HLA-DRB4P13762 266 aa9.25□□□□□ -0.93
PTPN4-201ENST00000263708 TIRAPP58753 221 aa9.25□□□□□ -0.93
PTPN4-201ENST00000263708 TMEM141Q96I45 108 aa9.25□□□□□ -0.93
PTPN4-201ENST00000263708 HLA-DRB4X5D2U9 266 aa9.25□□□□□ -0.93
PTPN4-201ENST00000263708 IFI6P09912 130 aa9.25□□□□□ -0.93
PTPN4-201ENST00000263708 A0A0G2JNJ9 132 aa9.25□□□□□ -0.93
PTPN4-201ENST00000263708 Q9UFV3 132 aa9.25□□□□□ -0.93
PTPN4-201ENST00000263708 AGMATQ9BSE5 352 aa9.25□□□□□ -0.93
PTPN4-201ENST00000263708 TNRC6BQ9UPQ9 1833 aaKnown RBP9.25□□□□□ -0.93
PTPN4-201ENST00000263708 A0A0J9YY99 117 aa9.25□□□□□ -0.93
PTPN4-201ENST00000263708 HEPN1Q6WQI6 88 aa9.25□□□□□ -0.93
PTPN4-201ENST00000263708 TICRRQ7Z2Z1 1910 aa9.24□□□□□ -0.93
PTPN4-201ENST00000263708 TNRC6AQ8NDV7 1962 aaKnown RBP9.24□□□□□ -0.93
PTPN4-201ENST00000263708 TRBV20-1A0A075B6N2 111 aa9.24□□□□□ -0.93
PTPN4-201ENST00000263708 RHODO00212 210 aa9.24□□□□□ -0.93
PTPN4-201ENST00000263708 AMBPP02760 352 aa9.24□□□□□ -0.93
PTPN4-201ENST00000263708 IGLV3-21P80748 117 aaPredicted RBP9.24□□□□□ -0.93
PTPN4-201ENST00000263708 Q6ZQT7 251 aa9.24□□□□□ -0.93
PTPN4-201ENST00000263708 RNF222A6NCQ9 220 aa9.24□□□□□ -0.93
PTPN4-201ENST00000263708 TRAV26-2A0A0B4J265 109 aa9.24□□□□□ -0.93
PTPN4-201ENST00000263708 CXCL1P09341 107 aa9.24□□□□□ -0.93
PTPN4-201ENST00000263708 MST1LQ2TV78 715 aa9.24□□□□□ -0.93
PTPN4-201ENST00000263708 CFHR4Q92496 578 aa9.24□□□□□ -0.93
PTPN4-201ENST00000263708 IGLV2-23P01705 113 aa9.24□□□□□ -0.93
PTPN4-201ENST00000263708 GLRX5Q86SX6 157 aa9.24□□□□□ -0.93
PTPN4-201ENST00000263708 RFNGQ9Y644 331 aa9.24□□□□□ -0.93
PTPN4-201ENST00000263708 BUB3O43684 328 aa9.23□□□□□ -0.93
PTPN4-201ENST00000263708 PKIGQ9Y2B9 76 aa9.23□□□□□ -0.93
PTPN4-201ENST00000263708 ETDCA0A1B0GVM5 59 aa9.23□□□□□ -0.93
PTPN4-201ENST00000263708 SIGLEC9Q9Y336 463 aa9.23□□□□□ -0.93
PTPN4-201ENST00000263708 PINLYPA6NC86 204 aa9.23□□□□□ -0.93
PTPN4-201ENST00000263708 SP5Q6BEB4 398 aaPredicted RBP9.23□□□□□ -0.93
PTPN4-201ENST00000263708 Q0VFX4 171 aa9.23□□□□□ -0.93
PTPN4-201ENST00000263708 UBE2E1P51965 193 aa9.23□□□□□ -0.93
PTPN4-201ENST00000263708 UNQ6494/PRO21346Q6UXR6 183 aa9.23□□□□□ -0.93
PTPN4-201ENST00000263708 OOSP1A8MZH6 123 aa9.23□□□□□ -0.93
PTPN4-201ENST00000263708 MRPL14Q6P1L8 145 aaKnown RBP9.23□□□□□ -0.93
PTPN4-201ENST00000263708 HIST3H2BBQ8N257 126 aa9.23□□□□□ -0.93
PTPN4-201ENST00000263708 TMEM190Q8WZ59 177 aa9.23□□□□□ -0.93
PTPN4-201ENST00000263708 FUSP35637 526 aaKnown RBP eCLIP9.23□□□□□ -0.93
PTPN4-201ENST00000263708 FBLIM1Q8WUP2 373 aa9.23□□□□□ -0.93
PTPN4-201ENST00000263708 TMEM105Q8N8V8 129 aa9.22□□□□□ -0.93
PTPN4-201ENST00000263708 CARD19Q96LW7 228 aa9.22□□□□□ -0.93
PTPN4-201ENST00000263708 NDUFB1O75438 58 aa9.22□□□□□ -0.93
PTPN4-201ENST00000263708 C1orf43Q9BWL3 253 aa9.22□□□□□ -0.93
PTPN4-201ENST00000263708 MGAMO43451 1857 aa9.22□□□□□ -0.93
PTPN4-201ENST00000263708 UBE2V1Q13404 147 aa9.22□□□□□ -0.93
PTPN4-201ENST00000263708 FGFBP3Q8TAT2 258 aa9.21□□□□□ -0.93
PTPN4-201ENST00000263708 COL8A2P25067 703 aa9.21□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms