RNA–Protein interactions for RNA: ENST00000263388.6

NOTCH3-201, Transcript of notch 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NOTCH3, Length 8,666 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH3-201ENST00000263388 C1orf122Q6ZSJ8 110 aa14.27□□□□□ -0.13
NOTCH3-201ENST00000263388 PRDM6Q9NQX0 595 aa14.27□□□□□ -0.13
NOTCH3-201ENST00000263388 PSPNO60542 156 aa14.27□□□□□ -0.13
NOTCH3-201ENST00000263388 DSCR8Q96T75 97 aa14.27□□□□□ -0.13
NOTCH3-201ENST00000263388 TMEM75Q8N9X5 138 aa14.26□□□□□ -0.13
NOTCH3-201ENST00000263388 NTN3O00634 580 aaPredicted RBP14.26□□□□□ -0.13
NOTCH3-201ENST00000263388 ZNF474Q6S9Z5 364 aaPredicted RBP14.26□□□□□ -0.13
NOTCH3-201ENST00000263388 LSM4Q9Y4Z0 139 aaKnown RBP14.26□□□□□ -0.13
NOTCH3-201ENST00000263388 CSRP1P21291 193 aaKnown RBP14.26□□□□□ -0.13
NOTCH3-201ENST00000263388 SAP30O75446 220 aa14.26□□□□□ -0.13
NOTCH3-201ENST00000263388 DMRTC2Q8IXT2 367 aaPredicted RBP14.26□□□□□ -0.13
NOTCH3-201ENST00000263388 LYNX1G3V0Z9 82 aa14.26□□□□□ -0.13
NOTCH3-201ENST00000263388 LYNX1P0DP58 116 aa14.26□□□□□ -0.13
NOTCH3-201ENST00000263388 SPATA31B1PQ5VZV4 182 aa14.26□□□□□ -0.13
NOTCH3-201ENST00000263388 TMEM158Q8WZ71 300 aa14.26□□□□□ -0.13
NOTCH3-201ENST00000263388 RFNGQ9Y644 331 aa14.26□□□□□ -0.13
NOTCH3-201ENST00000263388 IGHV3-73A0A0B4J1V6 119 aa14.26□□□□□ -0.13
NOTCH3-201ENST00000263388 EFNA4P52798 201 aa14.26□□□□□ -0.13
NOTCH3-201ENST00000263388 PINLYPA6NC86 204 aa14.25□□□□□ -0.13
NOTCH3-201ENST00000263388 NTF4P34130 210 aa14.25□□□□□ -0.13
NOTCH3-201ENST00000263388 TMEM256Q8N2U0 113 aa14.25□□□□□ -0.13
NOTCH3-201ENST00000263388 WFDC12Q8WWY7 111 aa14.25□□□□□ -0.13
NOTCH3-201ENST00000263388 MUC6Q6W4X9 2439 aa14.25□□□□□ -0.13
NOTCH3-201ENST00000263388 F8W1H4 67 aa14.25□□□□□ -0.13
NOTCH3-201ENST00000263388 NSUN5P1Q3KNT7 163 aa14.25□□□□□ -0.13
NOTCH3-201ENST00000263388 MST1P26927 711 aa14.24□□□□□ -0.13
NOTCH3-201ENST00000263388 SPACA3Q8IXA5 215 aa14.24□□□□□ -0.13
NOTCH3-201ENST00000263388 CD177Q8N6Q3 437 aa14.24□□□□□ -0.13
NOTCH3-201ENST00000263388 Q6P435 159 aa14.24□□□□□ -0.13
NOTCH3-201ENST00000263388 PRIMA1Q86XR5 153 aa14.24□□□□□ -0.13
NOTCH3-201ENST00000263388 QRFPP83859 136 aa14.24□□□□□ -0.13
NOTCH3-201ENST00000263388 FCN3O75636 299 aa14.24□□□□□ -0.13
NOTCH3-201ENST00000263388 CEACAM8P31997 349 aaPredicted RBP14.24□□□□□ -0.13
NOTCH3-201ENST00000263388 ZNF329Q86UD4 541 aa14.24□□□□□ -0.13
NOTCH3-201ENST00000263388 ZNF625Q96I27 306 aaPredicted RBP14.24□□□□□ -0.13
NOTCH3-201ENST00000263388 LY6G5BQ8NDX9 201 aa14.23□□□□□ -0.13
NOTCH3-201ENST00000263388 C15orf62A8K5M9 175 aa14.23□□□□□ -0.13
NOTCH3-201ENST00000263388 C3orf79P0CE67 100 aa14.23□□□□□ -0.13
NOTCH3-201ENST00000263388 UTF1Q5T230 341 aa14.23□□□□□ -0.13
NOTCH3-201ENST00000263388 C14orf178Q8N769 122 aaPredicted RBP14.23□□□□□ -0.13
NOTCH3-201ENST00000263388 C10orf55Q5SWW7 151 aa14.23□□□□□ -0.13
NOTCH3-201ENST00000263388 LINC00473A8K010 186 aa14.22□□□□□ -0.13
NOTCH3-201ENST00000263388 B4DSR2 109 aa14.22□□□□□ -0.13
NOTCH3-201ENST00000263388 TRAV3A0A0B4J244 114 aa14.22□□□□□ -0.13
NOTCH3-201ENST00000263388 TNRC6BQ9UPQ9 1833 aaKnown RBP14.22□□□□□ -0.13
NOTCH3-201ENST00000263388 NDPQ00604 133 aa14.22□□□□□ -0.13
NOTCH3-201ENST00000263388 LIME1Q9H400 295 aa14.22□□□□□ -0.13
NOTCH3-201ENST00000263388 BDP1A6H8Y1 2624 aa14.22□□□□□ -0.13
NOTCH3-201ENST00000263388 MPV17L2Q567V2 206 aa14.22□□□□□ -0.13
NOTCH3-201ENST00000263388 DAZ1Q9NQZ3 744 aaKnown RBP14.22□□□□□ -0.13
NOTCH3-201ENST00000263388 Q8TAT8 98 aa14.21□□□□□ -0.13
NOTCH3-201ENST00000263388 TCTEX1D4Q5JR98 221 aa14.21□□□□□ -0.13
NOTCH3-201ENST00000263388 PPDPFLQ8WWR9 84 aa14.21□□□□□ -0.13
NOTCH3-201ENST00000263388 TMEM14BQ9NUH8 114 aa14.21□□□□□ -0.13
NOTCH3-201ENST00000263388 ZNF114Q8NC26 417 aa14.21□□□□□ -0.13
NOTCH3-201ENST00000263388 PYY3Q5JQD4 70 aa14.2□□□□□ -0.14
NOTCH3-201ENST00000263388 C1orf159Q96HA4 380 aa14.2□□□□□ -0.14
NOTCH3-201ENST00000263388 TMEM126AQ9H061 195 aa14.2□□□□□ -0.14
NOTCH3-201ENST00000263388 C3orf36Q3SXR2 165 aa14.2□□□□□ -0.14
NOTCH3-201ENST00000263388 TRPT1Q86TN4 253 aaKnown RBP14.2□□□□□ -0.14
NOTCH3-201ENST00000263388 NDUFB8O95169 186 aa14.2□□□□□ -0.14
NOTCH3-201ENST00000263388 PMVKQ15126 192 aa14.2□□□□□ -0.14
NOTCH3-201ENST00000263388 AMN1Q8IY45 258 aa14.2□□□□□ -0.14
NOTCH3-201ENST00000263388 KLRD1Q13241 179 aa14.19□□□□□ -0.14
NOTCH3-201ENST00000263388 PIP4P2Q8N4L2 257 aa14.19□□□□□ -0.14
NOTCH3-201ENST00000263388 H3BUX3 64 aa14.19□□□□□ -0.14
NOTCH3-201ENST00000263388 FAM231BA6NCW3 169 aa14.19□□□□□ -0.14
NOTCH3-201ENST00000263388 EGR2P11161 476 aaPredicted RBP14.19□□□□□ -0.14
NOTCH3-201ENST00000263388 KLHL30-AS1Q8NEE0 82 aa14.19□□□□□ -0.14
NOTCH3-201ENST00000263388 GAFA1Q96PS6 74 aa14.19□□□□□ -0.14
NOTCH3-201ENST00000263388 SPXQ9BT56 116 aa14.19□□□□□ -0.14
NOTCH3-201ENST00000263388 A0A0G2JNJ9 132 aa14.19□□□□□ -0.14
NOTCH3-201ENST00000263388 CFPP27918 469 aa14.19□□□□□ -0.14
NOTCH3-201ENST00000263388 ZC2HC1BQ5TFG8 222 aa14.19□□□□□ -0.14
NOTCH3-201ENST00000263388 NAA38Q9BRA0 125 aaKnown RBP14.19□□□□□ -0.14
NOTCH3-201ENST00000263388 Q9UFV3 132 aa14.19□□□□□ -0.14
NOTCH3-201ENST00000263388 IGHG3P01860 377 aa14.19□□□□□ -0.14
NOTCH3-201ENST00000263388 NKAPP1Q8N9T2 125 aa14.19□□□□□ -0.14
NOTCH3-201ENST00000263388 TMEM141Q96I45 108 aa14.19□□□□□ -0.14
NOTCH3-201ENST00000263388 GPR179Q6PRD1 2367 aa14.19□□□□□ -0.14
NOTCH3-201ENST00000263388 Q0VG73 95 aa14.18□□□□□ -0.14
NOTCH3-201ENST00000263388 Q86TA4 180 aa14.18□□□□□ -0.14
NOTCH3-201ENST00000263388 LINC00527Q9UJ94 153 aa14.18□□□□□ -0.14
NOTCH3-201ENST00000263388 C11orf44Q8N8P7 122 aa14.18□□□□□ -0.14
NOTCH3-201ENST00000263388 ANKHD1Q8IWZ3 2542 aaKnown RBP14.18□□□□□ -0.14
NOTCH3-201ENST00000263388 RNASE2P10153 161 aaKnown RBP14.18□□□□□ -0.14
NOTCH3-201ENST00000263388 TMEM105Q8N8V8 129 aa14.18□□□□□ -0.14
NOTCH3-201ENST00000263388 HGFACQ04756 655 aa14.17□□□□□ -0.14
NOTCH3-201ENST00000263388 EFNA2O43921 213 aa14.17□□□□□ -0.14
NOTCH3-201ENST00000263388 BMPERQ8N8U9 685 aa14.17□□□□□ -0.14
NOTCH3-201ENST00000263388 MMP23AO75900 390 aa14.17□□□□□ -0.14
NOTCH3-201ENST00000263388 MYO18BQ8IUG5 2567 aa14.17□□□□□ -0.14
NOTCH3-201ENST00000263388 RPL35AP18077 110 aaKnown RBP14.17□□□□□ -0.14
NOTCH3-201ENST00000263388 PRRC2AP48634 2157 aaKnown RBP14.17□□□□□ -0.14
NOTCH3-201ENST00000263388 ZNF664Q8N3J9 261 aa14.16□□□□□ -0.14
NOTCH3-201ENST00000263388 ZNF561-AS1K7EIQ3 104 aa14.16□□□□□ -0.14
NOTCH3-201ENST00000263388 IGKV1-16P04430 117 aa14.16□□□□□ -0.14
NOTCH3-201ENST00000263388 FXYD7P58549 80 aa14.16□□□□□ -0.14
NOTCH3-201ENST00000263388 SHANK2-AS3Q9BTD1 123 aa14.16□□□□□ -0.14
NOTCH3-201ENST00000263388 IGKV1D-17A0A075B6S4 117 aa14.16□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 460.6 ms