RNA–Protein interactions for RNA: ENST00000261897.5

PRPF40B-201, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRPF40B, Length 3,602 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-201ENST00000261897 SYT8Q8NBV8 401 aa12.71□□□□□ -0.37
PRPF40B-201ENST00000261897 SCGB2A1O75556 95 aa12.71□□□□□ -0.38
PRPF40B-201ENST00000261897 CRYBA4P53673 196 aa12.71□□□□□ -0.38
PRPF40B-201ENST00000261897 RPS20P60866 119 aaKnown RBP12.71□□□□□ -0.38
PRPF40B-201ENST00000261897 MYOZ3Q8TDC0 251 aa12.71□□□□□ -0.38
PRPF40B-201ENST00000261897 C20orf78Q9BR46 151 aa12.71□□□□□ -0.38
PRPF40B-201ENST00000261897 ZNF785A8K8V0 405 aa12.7□□□□□ -0.38
PRPF40B-201ENST00000261897 NDUFS7O75251 213 aa12.7□□□□□ -0.38
PRPF40B-201ENST00000261897 MRPL51Q4U2R6 128 aaKnown RBP12.7□□□□□ -0.38
PRPF40B-201ENST00000261897 TMEM158Q8WZ71 300 aa12.7□□□□□ -0.38
PRPF40B-201ENST00000261897 VKORC1Q9BQB6 163 aa12.7□□□□□ -0.38
PRPF40B-201ENST00000261897 TMEM8BA6NDV4 472 aa12.69□□□□□ -0.38
PRPF40B-201ENST00000261897 NCBP2LA6PVI3 153 aaKnown RBP12.69□□□□□ -0.38
PRPF40B-201ENST00000261897 CRXO43186 299 aaPredicted RBP12.69□□□□□ -0.38
PRPF40B-201ENST00000261897 IGKCP01834 107 aa12.69□□□□□ -0.38
PRPF40B-201ENST00000261897 SRSF6Q13247 344 aaKnown RBP12.69□□□□□ -0.38
PRPF40B-201ENST00000261897 C1orf122Q6ZSJ8 110 aa12.69□□□□□ -0.38
PRPF40B-201ENST00000261897 SS18L2Q9UHA2 77 aa12.69□□□□□ -0.38
PRPF40B-201ENST00000261897 PTH2Q96A98 100 aa12.69□□□□□ -0.38
PRPF40B-201ENST00000261897 OTORQ9NRC9 128 aa12.69□□□□□ -0.38
PRPF40B-201ENST00000261897 TRAV26-2A0A0B4J265 109 aa12.69□□□□□ -0.38
PRPF40B-201ENST00000261897 FAM27E3Q08E93 113 aa12.68□□□□□ -0.38
PRPF40B-201ENST00000261897 BOD1L2Q8IYS8 172 aa12.68□□□□□ -0.38
PRPF40B-201ENST00000261897 SPAG8Q99932 426 aaPredicted RBP12.68□□□□□ -0.38
PRPF40B-201ENST00000261897 BEX4Q9NWD9 120 aaPredicted RBP12.68□□□□□ -0.38
PRPF40B-201ENST00000261897 PTPRBP23467 1997 aa12.68□□□□□ -0.38
PRPF40B-201ENST00000261897 ZFHX2Q9C0A1 2572 aaPredicted RBP12.68□□□□□ -0.38
PRPF40B-201ENST00000261897 Q1RN00 199 aa12.68□□□□□ -0.38
PRPF40B-201ENST00000261897 GLMPQ8WWB7 406 aa12.68□□□□□ -0.38
PRPF40B-201ENST00000261897 NGBQ9NPG2 151 aa12.68□□□□□ -0.38
PRPF40B-201ENST00000261897 TRBV25-1A0A075B6N4 114 aa12.68□□□□□ -0.38
PRPF40B-201ENST00000261897 HAX1O00165 279 aa12.68□□□□□ -0.38
PRPF40B-201ENST00000261897 UFSP1Q6NVU6 142 aa12.68□□□□□ -0.38
PRPF40B-201ENST00000261897 C8orf46Q8TAG6 207 aa12.68□□□□□ -0.38
PRPF40B-201ENST00000261897 ZNF436-AS1Q8NC38 126 aaPredicted RBP12.67□□□□□ -0.38
PRPF40B-201ENST00000261897 SH2D1AO60880 128 aa12.67□□□□□ -0.38
PRPF40B-201ENST00000261897 EFNA4P52798 201 aa12.67□□□□□ -0.38
PRPF40B-201ENST00000261897 PGPEP1Q9NXJ5 209 aa12.67□□□□□ -0.38
PRPF40B-201ENST00000261897 ADGRG4Q8IZF6 3080 aa12.67□□□□□ -0.38
PRPF40B-201ENST00000261897 IGKV1D-37A0A075B6S9 117 aa12.67□□□□□ -0.38
PRPF40B-201ENST00000261897 DMDP11532 3685 aa12.66□□□□□ -0.38
PRPF40B-201ENST00000261897 OR11H12B2RN74 326 aa12.66□□□□□ -0.38
PRPF40B-201ENST00000261897 OR11H1Q8NG94 326 aa12.66□□□□□ -0.38
PRPF40B-201ENST00000261897 OR11H2Q8NH07 326 aa12.66□□□□□ -0.38
PRPF40B-201ENST00000261897 MRPL35Q9NZE8 188 aaKnown RBP12.66□□□□□ -0.38
PRPF40B-201ENST00000261897 DPM2O94777 84 aa12.66□□□□□ -0.38
PRPF40B-201ENST00000261897 GAS8-AS1O95177 125 aa12.66□□□□□ -0.38
PRPF40B-201ENST00000261897 PRTN3P24158 256 aa12.66□□□□□ -0.38
PRPF40B-201ENST00000261897 HLA-DMBP28068 263 aa12.66□□□□□ -0.38
PRPF40B-201ENST00000261897 DEFB109BQ30KR1 87 aa12.66□□□□□ -0.38
PRPF40B-201ENST00000261897 SPANXN1Q5VSR9 72 aa12.66□□□□□ -0.38
PRPF40B-201ENST00000261897 FAM104BQ5XKR9 115 aa12.66□□□□□ -0.38
PRPF40B-201ENST00000261897 CCDC144NLQ6NUI1 221 aa12.66□□□□□ -0.38
PRPF40B-201ENST00000261897 LYNX1G3V0Z9 82 aa12.66□□□□□ -0.38
PRPF40B-201ENST00000261897 NTN3O00634 580 aaPredicted RBP12.66□□□□□ -0.38
PRPF40B-201ENST00000261897 LYNX1P0DP58 116 aa12.66□□□□□ -0.38
PRPF40B-201ENST00000261897 GAFA1Q96PS6 74 aa12.66□□□□□ -0.38
PRPF40B-201ENST00000261897 ANAPC13Q9BS18 74 aa12.65□□□□□ -0.38
PRPF40B-201ENST00000261897 IGKV3-15P01624 115 aa12.65□□□□□ -0.38
PRPF40B-201ENST00000261897 MGPP08493 103 aa12.65□□□□□ -0.38
PRPF40B-201ENST00000261897 RPL11P62913 178 aaKnown RBP12.65□□□□□ -0.38
PRPF40B-201ENST00000261897 LGALS9BQ3B8N2 356 aa12.65□□□□□ -0.38
PRPF40B-201ENST00000261897 LGALS9CQ6DKI2 356 aa12.65□□□□□ -0.38
PRPF40B-201ENST00000261897 ONECUT1Q9UBC0 465 aa12.65□□□□□ -0.38
PRPF40B-201ENST00000261897 C19orf71A6NCJ1 209 aa12.64□□□□□ -0.39
PRPF40B-201ENST00000261897 LYPD2Q6UXB3 125 aa12.64□□□□□ -0.39
PRPF40B-201ENST00000261897 FDCSPQ8NFU4 85 aa12.64□□□□□ -0.39
PRPF40B-201ENST00000261897 MAP1AP78559 2803 aaPredicted RBP12.64□□□□□ -0.39
PRPF40B-201ENST00000261897 NACAE9PAV3 2078 aa12.64□□□□□ -0.39
PRPF40B-201ENST00000261897 TMEM200BQ69YZ2 307 aa12.64□□□□□ -0.39
PRPF40B-201ENST00000261897 NEGR1Q7Z3B1 354 aa12.64□□□□□ -0.39
PRPF40B-201ENST00000261897 ADAMTS20P59510 1910 aa12.64□□□□□ -0.39
PRPF40B-201ENST00000261897 ANKHD1Q8IWZ3 2542 aaKnown RBP12.64□□□□□ -0.39
PRPF40B-201ENST00000261897 IGHV1-46P01743 117 aa12.64□□□□□ -0.39
PRPF40B-201ENST00000261897 S100A4P26447 101 aaKnown RBP12.64□□□□□ -0.39
PRPF40B-201ENST00000261897 MLST8Q9BVC4 326 aa12.64□□□□□ -0.39
PRPF40B-201ENST00000261897 PRSS22Q9GZN4 317 aa12.63□□□□□ -0.39
PRPF40B-201ENST00000261897 GP9P14770 177 aa12.63□□□□□ -0.39
PRPF40B-201ENST00000261897 ZNF492Q9P255 531 aa12.63□□□□□ -0.39
PRPF40B-201ENST00000261897 COL5A1P20908 1838 aaPredicted RBP12.63□□□□□ -0.39
PRPF40B-201ENST00000261897 TLN1Q9Y490 2541 aaKnown RBP12.63□□□□□ -0.39
PRPF40B-201ENST00000261897 M0R381 172 aa12.62□□□□□ -0.39
PRPF40B-201ENST00000261897 CLEC3BP05452 202 aa12.62□□□□□ -0.39
PRPF40B-201ENST00000261897 FGF6P10767 208 aa12.62□□□□□ -0.39
PRPF40B-201ENST00000261897 ERCC8Q13216 396 aa12.62□□□□□ -0.39
PRPF40B-201ENST00000261897 TMEM167AQ8TBQ9 72 aa12.62□□□□□ -0.39
PRPF40B-201ENST00000261897 IGLL5B9A064 214 aa12.62□□□□□ -0.39
PRPF40B-201ENST00000261897 SMIM17P0DL12 118 aa12.62□□□□□ -0.39
PRPF40B-201ENST00000261897 RNF125Q96EQ8 232 aa12.62□□□□□ -0.39
PRPF40B-201ENST00000261897 GFRA4Q9GZZ7 299 aa12.62□□□□□ -0.39
PRPF40B-201ENST00000261897 COL4A2P08572 1712 aa12.62□□□□□ -0.39
PRPF40B-201ENST00000261897 APOBEC3AP31941 199 aaPredicted RBP12.62□□□□□ -0.39
PRPF40B-201ENST00000261897 C12orf74Q32Q52 190 aa12.62□□□□□ -0.39
PRPF40B-201ENST00000261897 CT83Q5H943 113 aa12.62□□□□□ -0.39
PRPF40B-201ENST00000261897 C10orf142B7Z368 130 aa12.61□□□□□ -0.39
PRPF40B-201ENST00000261897 LINC01549A6NIU2 74 aa12.61□□□□□ -0.39
PRPF40B-201ENST00000261897 B5MCH6 92 aa12.61□□□□□ -0.39
PRPF40B-201ENST00000261897 CEND1Q8N111 149 aa12.61□□□□□ -0.39
PRPF40B-201ENST00000261897 C7orf69Q9H7B7 122 aa12.61□□□□□ -0.39
PRPF40B-201ENST00000261897 ABHD17AQ96GS6 310 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 129 ms