RNA–Protein interactions for RNA: ENST00000260563.4

RTCA-201, Transcript of RNA 3'-terminal phosphate cyclase, humanhuman

TSL 1 (best) BASIC

Gene RTCA, Length 1,534 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTCA-201ENST00000260563 AAMDCQ9H7C9 122 aa15.48■□□□□ 0.07
RTCA-201ENST00000260563 TREM1Q9NP99 234 aa15.48■□□□□ 0.07
RTCA-201ENST00000260563 AURKAIP1Q9NWT8 199 aaPredicted RBP15.48■□□□□ 0.07
RTCA-201ENST00000260563 TRAV2A0A0B4J234 112 aa15.47■□□□□ 0.07
RTCA-201ENST00000260563 PRB2P02812 416 aaPredicted RBP15.47■□□□□ 0.07
RTCA-201ENST00000260563 WFDC3Q8IUB2 231 aa15.47■□□□□ 0.07
RTCA-201ENST00000260563 C16orf92Q96LL3 132 aa15.47■□□□□ 0.07
RTCA-201ENST00000260563 C9JQL5 133 aa15.46■□□□□ 0.07
RTCA-201ENST00000260563 SOCS3O14543 225 aa15.46■□□□□ 0.07
RTCA-201ENST00000260563 DCANP1Q8TF63 244 aa15.46■□□□□ 0.07
RTCA-201ENST00000260563 CITED4Q96RK1 184 aa15.46■□□□□ 0.07
RTCA-201ENST00000260563 TRAV8-2A0A0B4J237 113 aa15.45■□□□□ 0.06
RTCA-201ENST00000260563 PDE6DO43924 150 aa15.45■□□□□ 0.06
RTCA-201ENST00000260563 NDUFS6O75380 124 aaKnown RBP15.45■□□□□ 0.06
RTCA-201ENST00000260563 SAMD13Q5VXD3 122 aa15.45■□□□□ 0.06
RTCA-201ENST00000260563 IGFL4Q6B9Z1 124 aa15.45■□□□□ 0.06
RTCA-201ENST00000260563 F6UZH7 168 aa15.44■□□□□ 0.06
RTCA-201ENST00000260563 SLC25A5P05141 298 aaKnown RBP15.44■□□□□ 0.06
RTCA-201ENST00000260563 SRP19P09132 144 aaKnown RBP15.44■□□□□ 0.06
RTCA-201ENST00000260563 CD7P09564 240 aa15.44■□□□□ 0.06
RTCA-201ENST00000260563 C5orf17Q8NAS9 161 aa15.44■□□□□ 0.06
RTCA-201ENST00000260563 TCEAL7Q9BRU2 100 aa15.44■□□□□ 0.06
RTCA-201ENST00000260563 K7EQG2 157 aa15.43■□□□□ 0.06
RTCA-201ENST00000260563 HLA-DMBP28068 263 aa15.43■□□□□ 0.06
RTCA-201ENST00000260563 CMTM2Q8TAZ6 248 aa15.43■□□□□ 0.06
RTCA-201ENST00000260563 CLEC5AQ9NY25 188 aa15.43■□□□□ 0.06
RTCA-201ENST00000260563 SCO2A0A1W2PP80 73 aa15.43■□□□□ 0.06
RTCA-201ENST00000260563 ISLRO14498 428 aa15.43■□□□□ 0.06
RTCA-201ENST00000260563 RNF182Q8N6D2 247 aa15.43■□□□□ 0.06
RTCA-201ENST00000260563 SLC35B3Q9H1N7 401 aa15.43■□□□□ 0.06
RTCA-201ENST00000260563 EPDR1Q9UM22 224 aa15.43■□□□□ 0.06
RTCA-201ENST00000260563 TMEM250H0YL14 139 aa15.42■□□□□ 0.06
RTCA-201ENST00000260563 M0R3E3 92 aa15.42■□□□□ 0.06
RTCA-201ENST00000260563 ID1P41134 155 aa15.42■□□□□ 0.06
RTCA-201ENST00000260563 GNG5P63218 68 aa15.42■□□□□ 0.06
RTCA-201ENST00000260563 CYB561D1Q8N8Q1 229 aa15.42■□□□□ 0.06
RTCA-201ENST00000260563 PRELID1Q9Y255 219 aa15.42■□□□□ 0.06
RTCA-201ENST00000260563 CSN1S1P47710 185 aa15.41■□□□□ 0.06
RTCA-201ENST00000260563 CEBPGP53567 150 aa15.41■□□□□ 0.06
RTCA-201ENST00000260563 DEFA6Q01524 100 aa15.41■□□□□ 0.06
RTCA-201ENST00000260563 FAM24BQ8N5W8 94 aa15.41■□□□□ 0.06
RTCA-201ENST00000260563 HIST1H2BAQ96A08 127 aa15.41■□□□□ 0.06
RTCA-201ENST00000260563 C11orf52Q96A22 123 aa15.41■□□□□ 0.06
RTCA-201ENST00000260563 RPH3ALQ9UNE2 315 aa15.41■□□□□ 0.06
RTCA-201ENST00000260563 OR11H12B2RN74 326 aa15.4■□□□□ 0.06
RTCA-201ENST00000260563 TCRAP04437 139 aa15.4■□□□□ 0.06
RTCA-201ENST00000260563 SFTA3P0C7M3 94 aa15.4■□□□□ 0.06
RTCA-201ENST00000260563 SNRPD3P62318 126 aaKnown RBP15.4■□□□□ 0.06
RTCA-201ENST00000260563 ODF3L2Q3SX64 289 aa15.4■□□□□ 0.06
RTCA-201ENST00000260563 Q8N1Y9 231 aa15.4■□□□□ 0.06
RTCA-201ENST00000260563 ARL6IP6Q8N6S5 226 aa15.4■□□□□ 0.06
RTCA-201ENST00000260563 MRPL53Q96EL3 112 aaKnown RBP15.4■□□□□ 0.06
RTCA-201ENST00000260563 C20orf173Q96LM9 149 aa15.4■□□□□ 0.06
RTCA-201ENST00000260563 MAP6D1Q9H9H5 199 aa15.4■□□□□ 0.06
RTCA-201ENST00000260563 K7EIL1 84 aa15.39■□□□□ 0.05
RTCA-201ENST00000260563 PEX7O00628 323 aa15.39■□□□□ 0.05
RTCA-201ENST00000260563 ZNF688P0C7X2 276 aa15.39■□□□□ 0.05
RTCA-201ENST00000260563 CMC4P56277 68 aaPredicted RBP15.39■□□□□ 0.05
RTCA-201ENST00000260563 PSG3Q16557 428 aa15.39■□□□□ 0.05
RTCA-201ENST00000260563 LINC00052Q96N35 136 aa15.39■□□□□ 0.05
RTCA-201ENST00000260563 FAM110AQ9BQ89 295 aa15.39■□□□□ 0.05
RTCA-201ENST00000260563 ATG101Q9BSB4 218 aa15.39■□□□□ 0.05
RTCA-201ENST00000260563 WFDC10AQ9H1F0 79 aa15.39■□□□□ 0.05
RTCA-201ENST00000260563 TMEM218A2RU14 115 aa15.38■□□□□ 0.05
RTCA-201ENST00000260563 ZNF705FA8MVS1 300 aaPredicted RBP15.38■□□□□ 0.05
RTCA-201ENST00000260563 DIRC3C9JPN6 131 aa15.38■□□□□ 0.05
RTCA-201ENST00000260563 C19orf73Q9NVV2 129 aa15.38■□□□□ 0.05
RTCA-201ENST00000260563 RPUSD4Q96CM3 377 aaKnown RBP15.38■□□□□ 0.05
RTCA-201ENST00000260563 PRB4P10163 310 aaPredicted RBP15.37■□□□□ 0.05
RTCA-201ENST00000260563 AKR1C3P42330 323 aa15.37■□□□□ 0.05
RTCA-201ENST00000260563 DEFB131AP59861 70 aa15.37■□□□□ 0.05
RTCA-201ENST00000260563 PSMG4Q5JS54 123 aa15.37■□□□□ 0.05
RTCA-201ENST00000260563 ZNF738Q8NE65 137 aa15.37■□□□□ 0.05
RTCA-201ENST00000260563 MRAPQ8TCY5 172 aa15.37■□□□□ 0.05
RTCA-201ENST00000260563 C2CD4CQ8TF44 421 aa15.37■□□□□ 0.05
RTCA-201ENST00000260563 SOHLH1Q5JUK2 328 aa15.36■□□□□ 0.05
RTCA-201ENST00000260563 GOLT1AQ6ZVE7 132 aa15.36■□□□□ 0.05
RTCA-201ENST00000260563 DEFB125Q8N687 156 aa15.36■□□□□ 0.05
RTCA-201ENST00000260563 DERL1Q9BUN8 251 aa15.36■□□□□ 0.05
RTCA-201ENST00000260563 PARLQ9H300 379 aa15.36■□□□□ 0.05
RTCA-201ENST00000260563 SERTM2A0A1B0GWG4 89 aa15.35■□□□□ 0.05
RTCA-201ENST00000260563 PRAC2D3DTV9 90 aa15.35■□□□□ 0.05
RTCA-201ENST00000260563 K7EQM0 130 aa15.35■□□□□ 0.05
RTCA-201ENST00000260563 CNN1P51911 297 aaKnown RBP15.35■□□□□ 0.05
RTCA-201ENST00000260563 ZNF674Q2M3X9 581 aa15.35■□□□□ 0.05
RTCA-201ENST00000260563 APRG1Q8IVJ8 170 aa15.35■□□□□ 0.05
RTCA-201ENST00000260563 LINC00479Q96M42 142 aa15.35■□□□□ 0.05
RTCA-201ENST00000260563 SRD5A3Q9H8P0 318 aa15.35■□□□□ 0.05
RTCA-201ENST00000260563 F8W036 122 aa15.34■□□□□ 0.05
RTCA-201ENST00000260563 IGHV4-30-4P0DP06 118 aa15.34■□□□□ 0.05
RTCA-201ENST00000260563 ADCYAP1P18509 176 aa15.34■□□□□ 0.05
RTCA-201ENST00000260563 RPL35P42766 123 aaKnown RBP15.34■□□□□ 0.05
RTCA-201ENST00000260563 MEGF8Q7Z7M0 2845 aa15.34■□□□□ 0.05
RTCA-201ENST00000260563 IGKV2-40A0A087WW87 121 aaPredicted RBP15.33■□□□□ 0.05
RTCA-201ENST00000260563 IGKV2D-40P01614 121 aaPredicted RBP15.33■□□□□ 0.05
RTCA-201ENST00000260563 DEFB121Q5J5C9 76 aa15.33■□□□□ 0.05
RTCA-201ENST00000260563 TUBA4BQ9H853 241 aa15.33■□□□□ 0.05
RTCA-201ENST00000260563 FBN3Q75N90 2809 aa15.33■□□□□ 0.04
RTCA-201ENST00000260563 TRAV34A0A0B4J273 112 aa15.33■□□□□ 0.04
RTCA-201ENST00000260563 ZNF727A8MUV8 499 aa15.33■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 84 ms