RNA–Protein interactions for RNA: ENST00000260130.8

SDCBP-201, Transcript of syndecan binding protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SDCBP, Length 2,167 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-201ENST00000260130 K7EIL1 84 aa12.7□□□□□ -0.38
SDCBP-201ENST00000260130 EDN2P20800 178 aa12.7□□□□□ -0.38
SDCBP-201ENST00000260130 MIC13Q5XKP0 118 aa12.7□□□□□ -0.38
SDCBP-201ENST00000260130 ETFRF1Q6IPR1 90 aa12.7□□□□□ -0.38
SDCBP-201ENST00000260130 MRAPQ8TCY5 172 aa12.7□□□□□ -0.38
SDCBP-201ENST00000260130 PRR25Q96S07 402 aa12.7□□□□□ -0.38
SDCBP-201ENST00000260130 ZNF705GA8MUZ8 300 aaPredicted RBP12.69□□□□□ -0.38
SDCBP-201ENST00000260130 SSTP61278 116 aa12.69□□□□□ -0.38
SDCBP-201ENST00000260130 RAB31Q13636 194 aa12.69□□□□□ -0.38
SDCBP-201ENST00000260130 GBGT1Q8N5D6 347 aa12.69□□□□□ -0.38
SDCBP-201ENST00000260130 LSM4Q9Y4Z0 139 aaKnown RBP12.69□□□□□ -0.38
SDCBP-201ENST00000260130 RHOBP62745 196 aa12.69□□□□□ -0.38
SDCBP-201ENST00000260130 IQCJQ1A5X6 159 aa12.69□□□□□ -0.38
SDCBP-201ENST00000260130 CACNG8Q8WXS5 425 aa12.69□□□□□ -0.38
SDCBP-201ENST00000260130 ZNF414Q96IQ9 312 aa12.69□□□□□ -0.38
SDCBP-201ENST00000260130 CD69Q07108 199 aa12.68□□□□□ -0.38
SDCBP-201ENST00000260130 TEPPQ6URK8 271 aa12.68□□□□□ -0.38
SDCBP-201ENST00000260130 ZNF664Q8N3J9 261 aa12.68□□□□□ -0.38
SDCBP-201ENST00000260130 TMEM116Q8NCL8 245 aa12.68□□□□□ -0.38
SDCBP-201ENST00000260130 DYNLRB2Q8TF09 96 aa12.68□□□□□ -0.38
SDCBP-201ENST00000260130 DAZ1Q9NQZ3 744 aaKnown RBP12.68□□□□□ -0.38
SDCBP-201ENST00000260130 TECRQ9NZ01 308 aaKnown RBP12.68□□□□□ -0.38
SDCBP-201ENST00000260130 TRAV9-1A0A075B6T8 112 aa12.67□□□□□ -0.38
SDCBP-201ENST00000260130 TRAV30A0A087WSZ9 112 aa12.67□□□□□ -0.38
SDCBP-201ENST00000260130 GP9P14770 177 aa12.67□□□□□ -0.38
SDCBP-201ENST00000260130 DEFB114Q30KQ6 69 aa12.67□□□□□ -0.38
SDCBP-201ENST00000260130 OR10G8Q8NGN5 311 aa12.67□□□□□ -0.38
SDCBP-201ENST00000260130 OR2K2Q8NGT1 345 aa12.67□□□□□ -0.38
SDCBP-201ENST00000260130 MRPL27Q9P0M9 148 aaKnown RBP12.67□□□□□ -0.38
SDCBP-201ENST00000260130 IGHV3OR16-8A0A075B7F1 116 aa12.67□□□□□ -0.38
SDCBP-201ENST00000260130 SCO2A0A1W2PP80 73 aa12.67□□□□□ -0.38
SDCBP-201ENST00000260130 K7EMT4 169 aa12.67□□□□□ -0.38
SDCBP-201ENST00000260130 SCGB2A1O75556 95 aa12.67□□□□□ -0.38
SDCBP-201ENST00000260130 C8orf88P0DMB2 117 aa12.67□□□□□ -0.38
SDCBP-201ENST00000260130 GCHFRP30047 84 aa12.67□□□□□ -0.38
SDCBP-201ENST00000260130 DEFB121Q5J5C9 76 aa12.67□□□□□ -0.38
SDCBP-201ENST00000260130 LCN12Q6JVE5 192 aa12.67□□□□□ -0.38
SDCBP-201ENST00000260130 PGPEP1LA6NFU8 196 aa12.66□□□□□ -0.38
SDCBP-201ENST00000260130 CD300EQ496F6 205 aaPredicted RBP12.66□□□□□ -0.38
SDCBP-201ENST00000260130 NPIPB3Q92617 1050 aa12.66□□□□□ -0.38
SDCBP-201ENST00000260130 UHRF2Q96PU4 802 aa12.66□□□□□ -0.38
SDCBP-201ENST00000260130 NDUFAF3Q9BU61 184 aa12.66□□□□□ -0.38
SDCBP-201ENST00000260130 TRBV20OR9-2A0A075B6H5 130 aa12.66□□□□□ -0.38
SDCBP-201ENST00000260130 IZUMO1RA6ND01 250 aa12.66□□□□□ -0.38
SDCBP-201ENST00000260130 FNDC10F2Z333 226 aa12.66□□□□□ -0.38
SDCBP-201ENST00000260130 RPL29P47914 159 aaKnown RBP12.66□□□□□ -0.38
SDCBP-201ENST00000260130 YPEL3P61236 119 aaPredicted RBP12.66□□□□□ -0.38
SDCBP-201ENST00000260130 STPG3Q8N7X2 389 aa12.66□□□□□ -0.38
SDCBP-201ENST00000260130 LY96Q9Y6Y9 160 aa12.66□□□□□ -0.38
SDCBP-201ENST00000260130 IGKV1-17P01599 117 aa12.65□□□□□ -0.38
SDCBP-201ENST00000260130 TOMM20LQ6UXN7 152 aa12.65□□□□□ -0.38
SDCBP-201ENST00000260130 OCC1Q8TAD7 63 aa12.65□□□□□ -0.38
SDCBP-201ENST00000260130 YTHDF2Q9Y5A9 579 aaKnown RBP12.65□□□□□ -0.38
SDCBP-201ENST00000260130 A0A1B0GV90 55 aa12.64□□□□□ -0.39
SDCBP-201ENST00000260130 ZNF207O43670 478 aaKnown RBP12.64□□□□□ -0.39
SDCBP-201ENST00000260130 IGLC1P0CG04 106 aa12.64□□□□□ -0.39
SDCBP-201ENST00000260130 TAS2R60P59551 318 aa12.64□□□□□ -0.39
SDCBP-201ENST00000260130 TIGITQ495A1 244 aa12.64□□□□□ -0.39
SDCBP-201ENST00000260130 C11orf52Q96A22 123 aa12.64□□□□□ -0.39
SDCBP-201ENST00000260130 C2orf88Q9BSF0 95 aa12.64□□□□□ -0.39
SDCBP-201ENST00000260130 ARL2-SNX15V9GYD0 113 aa12.64□□□□□ -0.39
SDCBP-201ENST00000260130 C9JCJ5 164 aa12.64□□□□□ -0.39
SDCBP-201ENST00000260130 OR10J1P30954 320 aa12.64□□□□□ -0.39
SDCBP-201ENST00000260130 IL36BQ9NZH7 164 aa12.64□□□□□ -0.39
SDCBP-201ENST00000260130 SORL1Q92673 2214 aa12.63□□□□□ -0.39
SDCBP-201ENST00000260130 ZNF90Q03938 601 aa12.63□□□□□ -0.39
SDCBP-201ENST00000260130 SLC35E1Q96K37 410 aa12.63□□□□□ -0.39
SDCBP-201ENST00000260130 SELENOKQ9Y6D0 94 aa12.63□□□□□ -0.39
SDCBP-201ENST00000260130 ZFAND3Q9H8U3 227 aa12.63□□□□□ -0.39
SDCBP-201ENST00000260130 SEPSECSQ9HD40 501 aaKnown RBP12.63□□□□□ -0.39
SDCBP-201ENST00000260130 ZNF785A8K8V0 405 aa12.62□□□□□ -0.39
SDCBP-201ENST00000260130 SCGB1D1O95968 90 aa12.62□□□□□ -0.39
SDCBP-201ENST00000260130 SELENOTP62341 195 aa12.62□□□□□ -0.39
SDCBP-201ENST00000260130 PRR20EP86478 221 aa12.62□□□□□ -0.39
SDCBP-201ENST00000260130 PRR20CP86479 221 aa12.62□□□□□ -0.39
SDCBP-201ENST00000260130 PRR20DP86480 221 aa12.62□□□□□ -0.39
SDCBP-201ENST00000260130 PRR20BP86481 221 aa12.62□□□□□ -0.39
SDCBP-201ENST00000260130 PRR20AP86496 221 aa12.62□□□□□ -0.39
SDCBP-201ENST00000260130 SMPXQ9UHP9 88 aa12.62□□□□□ -0.39
SDCBP-201ENST00000260130 IGHV7-4-1A0A0J9YVY3 117 aa12.62□□□□□ -0.39
SDCBP-201ENST00000260130 SPATA31B1PQ5VZV4 182 aa12.62□□□□□ -0.39
SDCBP-201ENST00000260130 TMEM61Q8N0U2 210 aa12.62□□□□□ -0.39
SDCBP-201ENST00000260130 TMEM167BQ9NRX6 74 aa12.62□□□□□ -0.39
SDCBP-201ENST00000260130 USF2Q15853 346 aaPredicted RBP12.61□□□□□ -0.39
SDCBP-201ENST00000260130 TMEM256Q8N2U0 113 aa12.61□□□□□ -0.39
SDCBP-201ENST00000260130 SLC45A2Q9UMX9 530 aa12.61□□□□□ -0.39
SDCBP-201ENST00000260130 RAB4BP61018 213 aa12.6□□□□□ -0.39
SDCBP-201ENST00000260130 PAFAH1B2P68402 229 aa12.6□□□□□ -0.39
SDCBP-201ENST00000260130 RPL19P84098 196 aaKnown RBP12.6□□□□□ -0.39
SDCBP-201ENST00000260130 RBPMS2Q6ZRY4 209 aaKnown RBP12.6□□□□□ -0.39
SDCBP-201ENST00000260130 Q8N1Y9 231 aa12.6□□□□□ -0.39
SDCBP-201ENST00000260130 CMTM2Q8TAZ6 248 aa12.6□□□□□ -0.39
SDCBP-201ENST00000260130 RHPN1-AS1Q9BWJ2 59 aa12.6□□□□□ -0.39
SDCBP-201ENST00000260130 NAGKQ9UJ70 344 aa12.6□□□□□ -0.39
SDCBP-201ENST00000260130 SMAD5-AS1Q9Y6J3 95 aa12.6□□□□□ -0.39
SDCBP-201ENST00000260130 TRAV25A0A0B4J276 109 aa12.6□□□□□ -0.39
SDCBP-201ENST00000260130 K7EN84 100 aa12.6□□□□□ -0.39
SDCBP-201ENST00000260130 CHEK1O14757 476 aa12.6□□□□□ -0.39
SDCBP-201ENST00000260130 GTSCR1Q86UQ5 136 aa12.6□□□□□ -0.39
SDCBP-201ENST00000260130 IGHV3-49A0A0A0MS15 119 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 99.3 ms