RNA–Protein interactions for RNA: ENST00000253754.7

PDLIM4-201, Transcript of PDZ and LIM domain 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM4, Length 2,282 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM4-201ENST00000253754 CBY1Q9Y3M2 126 aa14.55□□□□□ -0.08
PDLIM4-201ENST00000253754 DSCR9P59020 149 aa14.54□□□□□ -0.08
PDLIM4-201ENST00000253754 RHOGP84095 191 aa14.54□□□□□ -0.08
PDLIM4-201ENST00000253754 FAM110DQ8TAY7 271 aaPredicted RBP14.54□□□□□ -0.08
PDLIM4-201ENST00000253754 VN1R17PQ8TDU5 208 aa14.54□□□□□ -0.08
PDLIM4-201ENST00000253754 ALKBH7Q9BT30 221 aaPredicted RBP14.54□□□□□ -0.08
PDLIM4-201ENST00000253754 ZNF324O75467 553 aaPredicted RBP14.54□□□□□ -0.08
PDLIM4-201ENST00000253754 RAB4AP20338 218 aa14.54□□□□□ -0.08
PDLIM4-201ENST00000253754 CRIP1P50238 77 aa14.54□□□□□ -0.08
PDLIM4-201ENST00000253754 C8orf49Q96NF6 230 aa14.54□□□□□ -0.08
PDLIM4-201ENST00000253754 BRD3OSQ6XYD6 125 aa14.53□□□□□ -0.08
PDLIM4-201ENST00000253754 RBPMS2Q6ZRY4 209 aaKnown RBP14.53□□□□□ -0.08
PDLIM4-201ENST00000253754 SMAD5-AS1Q9Y6J3 95 aa14.53□□□□□ -0.08
PDLIM4-201ENST00000253754 TRBV6-1A0A0K0K1D8 114 aa14.53□□□□□ -0.08
PDLIM4-201ENST00000253754 NTF3P20783 257 aa14.53□□□□□ -0.08
PDLIM4-201ENST00000253754 ZNF502Q8TBZ5 544 aa14.53□□□□□ -0.08
PDLIM4-201ENST00000253754 RABAC1Q9UI14 185 aa14.53□□□□□ -0.08
PDLIM4-201ENST00000253754 IGKV2-40A0A087WW87 121 aaPredicted RBP14.52□□□□□ -0.08
PDLIM4-201ENST00000253754 IGKV2D-40P01614 121 aaPredicted RBP14.52□□□□□ -0.08
PDLIM4-201ENST00000253754 CLEC3BP05452 202 aa14.52□□□□□ -0.08
PDLIM4-201ENST00000253754 FOXA3P55318 350 aaPredicted RBP14.52□□□□□ -0.08
PDLIM4-201ENST00000253754 C16orf54Q6UWD8 224 aa14.52□□□□□ -0.08
PDLIM4-201ENST00000253754 NIT1Q86X76 327 aa14.52□□□□□ -0.08
PDLIM4-201ENST00000253754 GFRA4Q9GZZ7 299 aa14.52□□□□□ -0.08
PDLIM4-201ENST00000253754 AAMDCQ9H7C9 122 aa14.52□□□□□ -0.08
PDLIM4-201ENST00000253754 K7EQM0 130 aa14.52□□□□□ -0.09
PDLIM4-201ENST00000253754 HLA-DMBP28068 263 aa14.52□□□□□ -0.09
PDLIM4-201ENST00000253754 PAX8Q06710 450 aa14.52□□□□□ -0.09
PDLIM4-201ENST00000253754 PDE6HQ13956 83 aa14.52□□□□□ -0.09
PDLIM4-201ENST00000253754 C1orf194Q5T5A4 169 aa14.52□□□□□ -0.09
PDLIM4-201ENST00000253754 ZFP30Q9Y2G7 519 aa14.52□□□□□ -0.09
PDLIM4-201ENST00000253754 SOX21Q9Y651 276 aaPredicted RBP14.52□□□□□ -0.09
PDLIM4-201ENST00000253754 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP14.51□□□□□ -0.091e-5■■■■□ 21.5
PDLIM4-201ENST00000253754 S100A7AQ86SG5 101 aa14.51□□□□□ -0.09
PDLIM4-201ENST00000253754 C5orf56Q8N8D9 126 aa14.51□□□□□ -0.09
PDLIM4-201ENST00000253754 Q8N976 141 aa14.51□□□□□ -0.09
PDLIM4-201ENST00000253754 NDUFAF3Q9BU61 184 aa14.51□□□□□ -0.09
PDLIM4-201ENST00000253754 LINC00527Q9UJ94 153 aa14.51□□□□□ -0.09
PDLIM4-201ENST00000253754 KIR2DL5BA0A0G2JN68 375 aa14.5□□□□□ -0.09
PDLIM4-201ENST00000253754 KIR2DL5BA0A0G2JPC4 375 aa14.5□□□□□ -0.09
PDLIM4-201ENST00000253754 M0QZ24 198 aa14.5□□□□□ -0.09
PDLIM4-201ENST00000253754 TEX43Q6ZNM6 134 aa14.5□□□□□ -0.09
PDLIM4-201ENST00000253754 KIR2DL5AQ8N109 375 aa14.5□□□□□ -0.09
PDLIM4-201ENST00000253754 CCDC140Q96MF4 163 aa14.5□□□□□ -0.09
PDLIM4-201ENST00000253754 TRAV40A0A0B4J280 105 aa14.5□□□□□ -0.09
PDLIM4-201ENST00000253754 APOHP02749 345 aaPredicted RBP14.5□□□□□ -0.09
PDLIM4-201ENST00000253754 RPL7P18124 248 aaKnown RBP14.5□□□□□ -0.09
PDLIM4-201ENST00000253754 KLF5Q13887 457 aaPredicted RBP14.5□□□□□ -0.09
PDLIM4-201ENST00000253754 RNASEKQ6P5S7 137 aaKnown RBP14.5□□□□□ -0.09
PDLIM4-201ENST00000253754 OR4B1Q8NGF8 309 aa14.5□□□□□ -0.09
PDLIM4-201ENST00000253754 IGHV3-66A0A0C4DH42 116 aa14.49□□□□□ -0.09
PDLIM4-201ENST00000253754 MSMBP08118 114 aa14.49□□□□□ -0.09
PDLIM4-201ENST00000253754 SLC25A16P16260 332 aa14.49□□□□□ -0.09
PDLIM4-201ENST00000253754 CLEC19AQ6UXS0 136 aa14.49□□□□□ -0.09
PDLIM4-201ENST00000253754 TXN2Q99757 166 aa14.49□□□□□ -0.09
PDLIM4-201ENST00000253754 PAM16Q9Y3D7 125 aa14.49□□□□□ -0.09
PDLIM4-201ENST00000253754 ZFAND3Q9H8U3 227 aa14.49□□□□□ -0.09
PDLIM4-201ENST00000253754 PDZD2O15018 2839 aa14.49□□□□□ -0.09
PDLIM4-201ENST00000253754 IGHV3OR16-13A0A075B7E8 117 aa14.48□□□□□ -0.09
PDLIM4-201ENST00000253754 IGHV3-74A0A0B4J1X5 117 aa14.48□□□□□ -0.09
PDLIM4-201ENST00000253754 SCGB2A1O75556 95 aa14.48□□□□□ -0.09
PDLIM4-201ENST00000253754 ARMS2P0C7Q2 107 aa14.48□□□□□ -0.09
PDLIM4-201ENST00000253754 DEFB113Q30KQ7 82 aa14.48□□□□□ -0.09
PDLIM4-201ENST00000253754 Q8TAT8 98 aa14.48□□□□□ -0.09
PDLIM4-201ENST00000253754 URB1-AS1Q96HZ7 61 aa14.48□□□□□ -0.09
PDLIM4-201ENST00000253754 TPPP3Q9BW30 176 aa14.48□□□□□ -0.09
PDLIM4-201ENST00000253754 FAM231BA6NCW3 169 aa14.48□□□□□ -0.09
PDLIM4-201ENST00000253754 CHEK1O14757 476 aa14.48□□□□□ -0.09
PDLIM4-201ENST00000253754 IGHG4P01861 327 aa14.48□□□□□ -0.09
PDLIM4-201ENST00000253754 CSN1S1P47710 185 aa14.48□□□□□ -0.09
PDLIM4-201ENST00000253754 PSG9Q00887 426 aa14.48□□□□□ -0.09
PDLIM4-201ENST00000253754 PIFOQ8TCI5 191 aa14.48□□□□□ -0.09
PDLIM4-201ENST00000253754 CSPG4Q6UVK1 2322 aa14.47□□□□□ -0.09
PDLIM4-201ENST00000253754 TMSB15BA0A087X1C1 80 aa14.47□□□□□ -0.09
PDLIM4-201ENST00000253754 IGHV1-69DA0A0B4J2H0 117 aa14.47□□□□□ -0.09
PDLIM4-201ENST00000253754 B4DSR2 109 aa14.47□□□□□ -0.09
PDLIM4-201ENST00000253754 IGHV1-69P01742 117 aa14.47□□□□□ -0.09
PDLIM4-201ENST00000253754 C3orf79P0CE67 100 aa14.47□□□□□ -0.09
PDLIM4-201ENST00000253754 IGHV4-38-2P0DP08 117 aa14.47□□□□□ -0.09
PDLIM4-201ENST00000253754 HSBP1O75506 76 aa14.46□□□□□ -0.09
PDLIM4-201ENST00000253754 PMCHL1Q16048 86 aa14.46□□□□□ -0.09
PDLIM4-201ENST00000253754 MAPK1IP1LQ8NDC0 245 aa14.46□□□□□ -0.09
PDLIM4-201ENST00000253754 VGLL1Q99990 258 aa14.46□□□□□ -0.09
PDLIM4-201ENST00000253754 BEX4Q9NWD9 120 aaPredicted RBP14.46□□□□□ -0.09
PDLIM4-201ENST00000253754 HIF1ANQ9NWT6 349 aa14.46□□□□□ -0.09
PDLIM4-201ENST00000253754 SETXQ7Z333 2677 aaKnown RBP14.46□□□□□ -0.09
PDLIM4-201ENST00000253754 IGHV3-49A0A0A0MS15 119 aa14.46□□□□□ -0.09
PDLIM4-201ENST00000253754 AKAP9Q99996 3911 aa14.46□□□□□ -0.09
PDLIM4-201ENST00000253754 CLPSL1A2RUU4 121 aa14.45□□□□□ -0.1
PDLIM4-201ENST00000253754 HAX1O00165 279 aa14.45□□□□□ -0.1
PDLIM4-201ENST00000253754 ZNF207O43670 478 aaKnown RBP14.45□□□□□ -0.1
PDLIM4-201ENST00000253754 EREGO14944 169 aa14.45□□□□□ -0.1
PDLIM4-201ENST00000253754 CT45A10P0DMU9 189 aa14.45□□□□□ -0.1
PDLIM4-201ENST00000253754 C21orf62-AS1Q17RA5 79 aa14.45□□□□□ -0.1
PDLIM4-201ENST00000253754 TMEM190Q8WZ59 177 aa14.45□□□□□ -0.1
PDLIM4-201ENST00000253754 VAMP8Q9BV40 100 aa14.45□□□□□ -0.1
PDLIM4-201ENST00000253754 MOB4Q9Y3A3 225 aa14.45□□□□□ -0.1
PDLIM4-201ENST00000253754 A0A096LNT2 108 aa14.44□□□□□ -0.1
PDLIM4-201ENST00000253754 LOC102724200A0A096LPH7 203 aaPredicted RBP14.44□□□□□ -0.1
PDLIM4-201ENST00000253754 M0R2Z0 102 aa14.44□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms