RNA–Protein interactions for RNA: ENST00000248139.7

RAB40C-201, Transcript of RAB40C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB40C, Length 2,699 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-201ENST00000248139 LYPD1Q8N2G4 141 aa19.92■□□□□ 0.78
RAB40C-201ENST00000248139 RNF24Q9Y225 148 aa19.92■□□□□ 0.78
RAB40C-201ENST00000248139 IGHV7-81A0A0B4J1V7 117 aa19.92■□□□□ 0.78
RAB40C-201ENST00000248139 KLRB1Q12918 225 aa19.92■□□□□ 0.78
RAB40C-201ENST00000248139 TTC9CQ8N5M4 171 aa19.92■□□□□ 0.78
RAB40C-201ENST00000248139 MSRB2Q9Y3D2 182 aa19.92■□□□□ 0.78
RAB40C-201ENST00000248139 ECSCRQ19T08 205 aa19.91■□□□□ 0.78
RAB40C-201ENST00000248139 AMN1Q8IY45 258 aa19.91■□□□□ 0.78
RAB40C-201ENST00000248139 TRBV6-1A0A0K0K1D8 114 aa19.91■□□□□ 0.78
RAB40C-201ENST00000248139 ZNF80P51504 273 aaPredicted RBP19.91■□□□□ 0.78
RAB40C-201ENST00000248139 RELQ04864 619 aaPredicted RBP19.91■□□□□ 0.78
RAB40C-201ENST00000248139 DMRTA1Q5VZB9 504 aa19.91■□□□□ 0.78
RAB40C-201ENST00000248139 ERASQ7Z444 233 aa19.91■□□□□ 0.78
RAB40C-201ENST00000248139 TRAV30A0A087WSZ9 112 aa19.9■□□□□ 0.78
RAB40C-201ENST00000248139 GPR183P32249 361 aa19.9■□□□□ 0.78
RAB40C-201ENST00000248139 IFI27P40305 119 aaPredicted RBP19.9■□□□□ 0.78
RAB40C-201ENST00000248139 TMEM189A5PLL7 270 aa19.89■□□□□ 0.78
RAB40C-201ENST00000248139 LINC01548A6NM66 108 aa19.89■□□□□ 0.78
RAB40C-201ENST00000248139 CRXO43186 299 aaPredicted RBP19.89■□□□□ 0.78
RAB40C-201ENST00000248139 CSN1S1P47710 185 aa19.89■□□□□ 0.78
RAB40C-201ENST00000248139 FAM162BQ5T6X4 162 aa19.89■□□□□ 0.78
RAB40C-201ENST00000248139 Q8N6K4 173 aa19.89■□□□□ 0.78
RAB40C-201ENST00000248139 PRSS3P2Q8NHM4 247 aa19.89■□□□□ 0.78
RAB40C-201ENST00000248139 D6R8Y8 96 aa19.89■□□□□ 0.77
RAB40C-201ENST00000248139 ITPR1Q14643 2758 aa19.89■□□□□ 0.77
RAB40C-201ENST00000248139 SMKR1H3BMG3 65 aa19.89■□□□□ 0.77
RAB40C-201ENST00000248139 NCR2O95944 276 aa19.89■□□□□ 0.77
RAB40C-201ENST00000248139 IGHV3-49A0A0A0MS15 119 aa19.88■□□□□ 0.77
RAB40C-201ENST00000248139 IGHG4P01861 327 aa19.88■□□□□ 0.77
RAB40C-201ENST00000248139 MAP1LC3CQ9BXW4 147 aa19.88■□□□□ 0.77
RAB40C-201ENST00000248139 AP5S1Q9NUS5 200 aa19.88■□□□□ 0.77
RAB40C-201ENST00000248139 TCTAP57738 103 aa19.88■□□□□ 0.77
RAB40C-201ENST00000248139 Q8N9W7 124 aa19.88■□□□□ 0.77
RAB40C-201ENST00000248139 MRPS16Q9Y3D3 137 aaKnown RBP19.88■□□□□ 0.77
RAB40C-201ENST00000248139 ERCC8Q13216 396 aa19.87■□□□□ 0.77
RAB40C-201ENST00000248139 CCDC144NLQ6NUI1 221 aa19.87■□□□□ 0.77
RAB40C-201ENST00000248139 UBTD1Q9HAC8 227 aa19.87■□□□□ 0.77
RAB40C-201ENST00000248139 TCF21O43680 179 aa19.87■□□□□ 0.77
RAB40C-201ENST00000248139 OR5AL1P0C617 328 aa19.87■□□□□ 0.77
RAB40C-201ENST00000248139 RNF182Q8N6D2 247 aa19.87■□□□□ 0.77
RAB40C-201ENST00000248139 G3V318 75 aa19.86■□□□□ 0.77
RAB40C-201ENST00000248139 FOXE3Q13461 319 aa19.86■□□□□ 0.77
RAB40C-201ENST00000248139 PRR25Q96S07 402 aa19.86■□□□□ 0.77
RAB40C-201ENST00000248139 THYN1Q9P016 225 aa19.86■□□□□ 0.77
RAB40C-201ENST00000248139 SNAI2O43623 268 aa19.86■□□□□ 0.77
RAB40C-201ENST00000248139 PDE6HQ13956 83 aa19.86■□□□□ 0.77
RAB40C-201ENST00000248139 LY6DQ14210 128 aa19.86■□□□□ 0.77
RAB40C-201ENST00000248139 C15orf32Q32M92 178 aa19.86■□□□□ 0.77
RAB40C-201ENST00000248139 RABAC1Q9UI14 185 aa19.86■□□□□ 0.77
RAB40C-201ENST00000248139 PRAC2D3DTV9 90 aa19.85■□□□□ 0.77
RAB40C-201ENST00000248139 GAGE1Q13065 139 aa19.85■□□□□ 0.77
RAB40C-201ENST00000248139 MPV17L2Q567V2 206 aa19.85■□□□□ 0.77
RAB40C-201ENST00000248139 FA2HQ7L5A8 372 aa19.85■□□□□ 0.77
RAB40C-201ENST00000248139 RPL7P18124 248 aaKnown RBP19.85■□□□□ 0.77
RAB40C-201ENST00000248139 ZNF207O43670 478 aaKnown RBP19.84■□□□□ 0.77
RAB40C-201ENST00000248139 CLEC3BP05452 202 aa19.84■□□□□ 0.77
RAB40C-201ENST00000248139 MSRB1Q9NZV6 116 aa19.84■□□□□ 0.77
RAB40C-201ENST00000248139 TMEM191AQ9H0A3 160 aa19.84■□□□□ 0.77
RAB40C-201ENST00000248139 SIRPDQ9H106 197 aa19.84■□□□□ 0.77
RAB40C-201ENST00000248139 C20orf202A1L168 122 aa19.83■□□□□ 0.77
RAB40C-201ENST00000248139 ATP6V0E1O15342 81 aa19.83■□□□□ 0.77
RAB40C-201ENST00000248139 IGHV3OR16-10A0A075B7F0 116 aa19.83■□□□□ 0.76
RAB40C-201ENST00000248139 PPIFP30405 207 aaKnown RBP19.83■□□□□ 0.76
RAB40C-201ENST00000248139 PSG9Q00887 426 aa19.82■□□□□ 0.76
RAB40C-201ENST00000248139 OR8A1Q8NGG7 326 aa19.82■□□□□ 0.76
RAB40C-201ENST00000248139 SIGLEC8Q9NYZ4 499 aa19.82■□□□□ 0.76
RAB40C-201ENST00000248139 ZNF575Q86XF7 245 aa19.82■□□□□ 0.76
RAB40C-201ENST00000248139 AJUBAQ96IF1 538 aa19.82■□□□□ 0.76
RAB40C-201ENST00000248139 A0A096LNJ9 63 aa19.81■□□□□ 0.76
RAB40C-201ENST00000248139 SAA4P35542 130 aa19.81■□□□□ 0.76
RAB40C-201ENST00000248139 RHOGP84095 191 aa19.81■□□□□ 0.76
RAB40C-201ENST00000248139 TWIST1Q15672 202 aa19.81■□□□□ 0.76
RAB40C-201ENST00000248139 ZNF48Q96MX3 618 aaPredicted RBP19.81■□□□□ 0.76
RAB40C-201ENST00000248139 ZNF747Q9BV97 191 aa19.81■□□□□ 0.76
RAB40C-201ENST00000248139 LINC00527Q9UJ94 153 aa19.81■□□□□ 0.76
RAB40C-201ENST00000248139 HSPB8Q9UJY1 196 aa19.81■□□□□ 0.76
RAB40C-201ENST00000248139 SPG11Q96JI7 2443 aa19.81■□□□□ 0.76
RAB40C-201ENST00000248139 PRELID3AQ96N28 172 aa19.81■□□□□ 0.76
RAB40C-201ENST00000248139 GAS8-AS1O95177 125 aa19.8■□□□□ 0.76
RAB40C-201ENST00000248139 EBI3Q14213 229 aa19.8■□□□□ 0.76
RAB40C-201ENST00000248139 CLEC19AQ6UXS0 136 aa19.8■□□□□ 0.76
RAB40C-201ENST00000248139 WFDC3Q8IUB2 231 aa19.8■□□□□ 0.76
RAB40C-201ENST00000248139 ORM1P02763 201 aa19.8■□□□□ 0.76
RAB40C-201ENST00000248139 MRPL51Q4U2R6 128 aaKnown RBP19.8■□□□□ 0.76
RAB40C-201ENST00000248139 FAM104BQ5XKR9 115 aa19.8■□□□□ 0.76
RAB40C-201ENST00000248139 BPESC1Q9GZL8 116 aa19.8■□□□□ 0.76
RAB40C-201ENST00000248139 ST20Q9HBF5 79 aa19.8■□□□□ 0.76
RAB40C-201ENST00000248139 NUDT3O95989 172 aa19.79■□□□□ 0.76
RAB40C-201ENST00000248139 DTX2Q86UW9 622 aa19.79■□□□□ 0.76
RAB40C-201ENST00000248139 PET117Q6UWS5 81 aa19.79■□□□□ 0.76
RAB40C-201ENST00000248139 S100A7AQ86SG5 101 aa19.79■□□□□ 0.76
RAB40C-201ENST00000248139 HSBP1L1C9JCN9 74 aa19.79■□□□□ 0.76
RAB40C-201ENST00000248139 MINOS1Q5TGZ0 78 aa19.79■□□□□ 0.76
RAB40C-201ENST00000248139 C1orf122Q6ZSJ8 110 aa19.79■□□□□ 0.76
RAB40C-201ENST00000248139 TMEM219Q86XT9 240 aa19.79■□□□□ 0.76
RAB40C-201ENST00000248139 MINOS1-NBL1R4GNA1 71 aa19.79■□□□□ 0.76
RAB40C-201ENST00000248139 CCL25O15444 150 aa19.78■□□□□ 0.76
RAB40C-201ENST00000248139 CELSR2Q9HCU4 2923 aa19.78■□□□□ 0.76
RAB40C-201ENST00000248139 SLC25A34Q6PIV7 304 aa19.78■□□□□ 0.76
RAB40C-201ENST00000248139 ZNF493Q6ZR52 646 aa19.78■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 98.6 ms