RNA–Protein interactions for RNA: ENST00000244763.8

SSR1-201, Transcript of signal sequence receptor subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSR1, Length 9,669 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-201ENST00000244763 NLRC5Q86WI3 1866 aa5.92□□□□□ -1.46
SSR1-201ENST00000244763 A0A0U1RRA0 63 aa5.92□□□□□ -1.46
SSR1-201ENST00000244763 I3L3M4 83 aa5.92□□□□□ -1.46
SSR1-201ENST00000244763 PIP4P1Q86T03 277 aa5.92□□□□□ -1.46
SSR1-201ENST00000244763 RLFQ13129 1914 aa5.92□□□□□ -1.46
SSR1-201ENST00000244763 IGHV3-64A0A075B6Q5 118 aa5.92□□□□□ -1.46
SSR1-201ENST00000244763 C9orf66Q5T8R8 295 aa5.92□□□□□ -1.46
SSR1-201ENST00000244763 SPAG8Q99932 426 aaPredicted RBP5.92□□□□□ -1.46
SSR1-201ENST00000244763 SAMD5Q5TGI4 173 aa5.92□□□□□ -1.46
SSR1-201ENST00000244763 C14orf178Q8N769 122 aaPredicted RBP5.92□□□□□ -1.46
SSR1-201ENST00000244763 NKAPP1Q8N9T2 125 aa5.92□□□□□ -1.46
SSR1-201ENST00000244763 ST6GALNAC6Q969X2 333 aa5.92□□□□□ -1.46
SSR1-201ENST00000244763 ATP6V0BQ99437 205 aa5.92□□□□□ -1.46
SSR1-201ENST00000244763 GFI1Q99684 422 aa5.92□□□□□ -1.46
SSR1-201ENST00000244763 TMEM243Q9BU79 118 aa5.92□□□□□ -1.46
SSR1-201ENST00000244763 TRAV3A0A0B4J244 114 aa5.92□□□□□ -1.46
SSR1-201ENST00000244763 SPANXA1Q9NS26 97 aa5.92□□□□□ -1.46
SSR1-201ENST00000244763 IGHV1OR15-1A0A075B7D0 117 aa5.92□□□□□ -1.46
SSR1-201ENST00000244763 CFPP27918 469 aa5.92□□□□□ -1.46
SSR1-201ENST00000244763 NDUFA4L2Q9NRX3 87 aa5.92□□□□□ -1.46
SSR1-201ENST00000244763 QRFPP83859 136 aa5.92□□□□□ -1.46
SSR1-201ENST00000244763 SFTA2Q6UW10 78 aa5.92□□□□□ -1.46
SSR1-201ENST00000244763 TRAV13-1A0A0B4J241 112 aa5.91□□□□□ -1.46
SSR1-201ENST00000244763 SPANXDQ9BXN6 97 aa5.91□□□□□ -1.46
SSR1-201ENST00000244763 TMEM126AQ9H061 195 aa5.91□□□□□ -1.46
SSR1-201ENST00000244763 THAP8Q8NA92 274 aa5.91□□□□□ -1.46
SSR1-201ENST00000244763 NBASA2RRP1 2371 aa5.91□□□□□ -1.46
SSR1-201ENST00000244763 NDUFAF3Q9BU61 184 aa5.91□□□□□ -1.46
SSR1-201ENST00000244763 WFDC1Q9HC57 220 aa5.91□□□□□ -1.46
SSR1-201ENST00000244763 TMEM256Q8N2U0 113 aa5.91□□□□□ -1.46
SSR1-201ENST00000244763 EML6Q6ZMW3 1958 aa5.91□□□□□ -1.46
SSR1-201ENST00000244763 IGKV1-16P04430 117 aa5.91□□□□□ -1.46
SSR1-201ENST00000244763 RBMY1FQ15415 496 aaKnown RBP5.91□□□□□ -1.46
SSR1-201ENST00000244763 MESP1Q9BRJ9 268 aa5.91□□□□□ -1.46
SSR1-201ENST00000244763 ZNF492Q9P255 531 aa5.91□□□□□ -1.46
SSR1-201ENST00000244763 XCL2Q9UBD3 114 aa5.91□□□□□ -1.46
SSR1-201ENST00000244763 IGLV3-9A0A075B6K5 115 aa5.91□□□□□ -1.46
SSR1-201ENST00000244763 LYL1P12980 280 aa5.91□□□□□ -1.46
SSR1-201ENST00000244763 SRSF4Q08170 494 aaKnown RBP5.91□□□□□ -1.46
SSR1-201ENST00000244763 DEFB113Q30KQ7 82 aa5.91□□□□□ -1.46
SSR1-201ENST00000244763 RUSC1-AS1Q66K80 236 aa5.91□□□□□ -1.46
SSR1-201ENST00000244763 SH2D6Q7Z4S9 175 aa5.91□□□□□ -1.46
SSR1-201ENST00000244763 CACNA1HO95180 2353 aa5.91□□□□□ -1.46
SSR1-201ENST00000244763 CACNA1GO43497 2377 aa5.91□□□□□ -1.46
SSR1-201ENST00000244763 SSBP2P81877 361 aaPredicted RBP5.91□□□□□ -1.46
SSR1-201ENST00000244763 LY6HO94772 140 aa5.91□□□□□ -1.46
SSR1-201ENST00000244763 PFN1P07737 140 aaKnown RBP5.91□□□□□ -1.46
SSR1-201ENST00000244763 C8orf31Q8N9H6 132 aa5.91□□□□□ -1.46
SSR1-201ENST00000244763 SNHG12Q9BXW3 62 aa5.91□□□□□ -1.46
SSR1-201ENST00000244763 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP5.91□□□□□ -1.462e-8■■□□□ 12.6
SSR1-201ENST00000244763 USF3Q68DE3 2245 aa5.9□□□□□ -1.46
SSR1-201ENST00000244763 RIPPLY3P57055 190 aa5.9□□□□□ -1.46
SSR1-201ENST00000244763 PCNX1Q96RV3 2341 aa5.9□□□□□ -1.46
SSR1-201ENST00000244763 PRSS46E5RG02 174 aa5.9□□□□□ -1.46
SSR1-201ENST00000244763 HIST1H2BKO60814 126 aa5.9□□□□□ -1.46
SSR1-201ENST00000244763 HIST1H2BJP06899 126 aa5.9□□□□□ -1.46
SSR1-201ENST00000244763 CGB3P0DN86 165 aa5.9□□□□□ -1.46
SSR1-201ENST00000244763 HIST1H2BOP23527 126 aa5.9□□□□□ -1.46
SSR1-201ENST00000244763 HIST1H2BBP33778 126 aa5.9□□□□□ -1.46
SSR1-201ENST00000244763 HIST1H2BDP58876 126 aa5.9□□□□□ -1.46
SSR1-201ENST00000244763 HIST1H2BCP62807 126 aa5.9□□□□□ -1.46
SSR1-201ENST00000244763 HIST2H2BEQ16778 126 aa5.9□□□□□ -1.46
SSR1-201ENST00000244763 HIST2H2BFQ5QNW6 126 aaPredicted RBP5.9□□□□□ -1.46
SSR1-201ENST00000244763 HIST1H2BHQ93079 126 aa5.9□□□□□ -1.46
SSR1-201ENST00000244763 ZNF48Q96MX3 618 aaPredicted RBP5.9□□□□□ -1.46
SSR1-201ENST00000244763 HIST1H2BNQ99877 126 aa5.9□□□□□ -1.46
SSR1-201ENST00000244763 HIST1H2BMQ99879 126 aa5.9□□□□□ -1.46
SSR1-201ENST00000244763 FNDC4Q9H6D8 234 aaPredicted RBP5.9□□□□□ -1.46
SSR1-201ENST00000244763 UBE2CO00762 179 aa5.9□□□□□ -1.46
SSR1-201ENST00000244763 SPINK13Q1W4C9 94 aa5.9□□□□□ -1.46
SSR1-201ENST00000244763 TMEM14CQ9P0S9 112 aa5.9□□□□□ -1.46
SSR1-201ENST00000244763 BCL6BQ8N143 479 aaPredicted RBP5.9□□□□□ -1.47
SSR1-201ENST00000244763 RNF152Q8N8N0 203 aa5.9□□□□□ -1.47
SSR1-201ENST00000244763 VWC2Q2TAL6 325 aa5.9□□□□□ -1.47
SSR1-201ENST00000244763 C2orf82Q6UX34 121 aa5.9□□□□□ -1.47
SSR1-201ENST00000244763 PYGO2Q9BRQ0 406 aa5.9□□□□□ -1.47
SSR1-201ENST00000244763 VPREB3Q9UKI3 123 aa5.9□□□□□ -1.47
SSR1-201ENST00000244763 K7EMI3 77 aa5.89□□□□□ -1.47
SSR1-201ENST00000244763 NCR2O95944 276 aa5.89□□□□□ -1.47
SSR1-201ENST00000244763 ESDP10768 282 aa5.89□□□□□ -1.47
SSR1-201ENST00000244763 SIGMAR1Q99720 223 aa5.89□□□□□ -1.47
SSR1-201ENST00000244763 VSIRQ9H7M9 311 aa5.89□□□□□ -1.47
SSR1-201ENST00000244763 LENEPQ9Y5L5 61 aa5.89□□□□□ -1.47
SSR1-201ENST00000244763 WISP1O95388 367 aa5.89□□□□□ -1.47
SSR1-201ENST00000244763 Q86TA4 180 aa5.89□□□□□ -1.47
SSR1-201ENST00000244763 Q8TAT8 98 aa5.89□□□□□ -1.47
SSR1-201ENST00000244763 C8orf86Q6ZUL3 223 aa5.89□□□□□ -1.47
SSR1-201ENST00000244763 PLXNA2O75051 1894 aa5.89□□□□□ -1.47
SSR1-201ENST00000244763 CCL24O00175 119 aa5.89□□□□□ -1.47
SSR1-201ENST00000244763 DMRTC2Q8IXT2 367 aaPredicted RBP5.89□□□□□ -1.47
SSR1-201ENST00000244763 HIST1H4AP62805 103 aaKnown RBP5.89□□□□□ -1.47
SSR1-201ENST00000244763 INAFM2P0DMQ5 153 aa5.89□□□□□ -1.47
SSR1-201ENST00000244763 CGB7P0DN87 165 aa5.89□□□□□ -1.47
SSR1-201ENST00000244763 PMVKQ15126 192 aa5.89□□□□□ -1.47
SSR1-201ENST00000244763 RHOHQ15669 191 aa5.88□□□□□ -1.47
SSR1-201ENST00000244763 A0A087WWL8 130 aa5.88□□□□□ -1.47
SSR1-201ENST00000244763 C5orf63A6NC05 138 aa5.88□□□□□ -1.47
SSR1-201ENST00000244763 SYS1-DBNDD2H3BUS1 97 aa5.88□□□□□ -1.47
SSR1-201ENST00000244763 GAGE2BQ13066 116 aa5.88□□□□□ -1.47
SSR1-201ENST00000244763 C21orf62-AS1Q17RA5 79 aa5.88□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 149 ms