RNA–Protein interactions for RNA: ENST00000243108.4

HOXC6-201, Transcript of homeobox C6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC6, Length 1,733 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6-201ENST00000243108 MS4A10Q96PG2 267 aa13.24□□□□□ -0.29
HOXC6-201ENST00000243108 H3BTX0 84 aa13.23□□□□□ -0.29
HOXC6-201ENST00000243108 CLEC3BP05452 202 aa13.23□□□□□ -0.29
HOXC6-201ENST00000243108 RAB9AP51151 201 aa13.23□□□□□ -0.29
HOXC6-201ENST00000243108 GNG5P63218 68 aa13.23□□□□□ -0.29
HOXC6-201ENST00000243108 ATP5G2Q06055 141 aa13.23□□□□□ -0.29
HOXC6-201ENST00000243108 TMEM183BQ1AE95 376 aa13.23□□□□□ -0.29
HOXC6-201ENST00000243108 KCNIP4Q6PIL6 250 aa13.23□□□□□ -0.29
HOXC6-201ENST00000243108 UBE2E2Q96LR5 201 aa13.23□□□□□ -0.29
HOXC6-201ENST00000243108 LINC00479Q96M42 142 aa13.23□□□□□ -0.29
HOXC6-201ENST00000243108 ATG101Q9BSB4 218 aa13.23□□□□□ -0.29
HOXC6-201ENST00000243108 ZFAND3Q9H8U3 227 aa13.23□□□□□ -0.29
HOXC6-201ENST00000243108 BIN3Q9NQY0 253 aa13.23□□□□□ -0.29
HOXC6-201ENST00000243108 BMPR1BO00238 502 aa13.22□□□□□ -0.29
HOXC6-201ENST00000243108 LYPD1Q8N2G4 141 aa13.22□□□□□ -0.29
HOXC6-201ENST00000243108 OR11H1Q8NG94 326 aa13.22□□□□□ -0.29
HOXC6-201ENST00000243108 MCRIP2Q9BUT9 160 aaKnown RBP13.22□□□□□ -0.29
HOXC6-201ENST00000243108 RABAC1Q9UI14 185 aa13.22□□□□□ -0.29
HOXC6-201ENST00000243108 ISLRO14498 428 aa13.22□□□□□ -0.29
HOXC6-201ENST00000243108 S100A9P06702 114 aaKnown RBP13.22□□□□□ -0.29
HOXC6-201ENST00000243108 S100A7P31151 101 aa13.22□□□□□ -0.29
HOXC6-201ENST00000243108 OR5I1Q13606 314 aa13.22□□□□□ -0.29
HOXC6-201ENST00000243108 TOMM20LQ6UXN7 152 aa13.22□□□□□ -0.29
HOXC6-201ENST00000243108 CLEC19AQ6UXS0 136 aa13.22□□□□□ -0.29
HOXC6-201ENST00000243108 SRD5A3Q9H8P0 318 aa13.22□□□□□ -0.29
HOXC6-201ENST00000243108 OSTCQ9NRP0 149 aa13.22□□□□□ -0.29
HOXC6-201ENST00000243108 TCRAP04437 139 aa13.21□□□□□ -0.3
HOXC6-201ENST00000243108 TYMSP04818 313 aa13.21□□□□□ -0.3
HOXC6-201ENST00000243108 PDE6HQ13956 83 aa13.21□□□□□ -0.3
HOXC6-201ENST00000243108 SIGLEC15Q6ZMC9 328 aa13.21□□□□□ -0.3
HOXC6-201ENST00000243108 SMIM12Q96EX1 92 aa13.21□□□□□ -0.3
HOXC6-201ENST00000243108 TRAV34A0A0B4J273 112 aa13.2□□□□□ -0.3
HOXC6-201ENST00000243108 A0A1W2PPQ1 181 aa13.2□□□□□ -0.3
HOXC6-201ENST00000243108 TRGV3P03979 118 aa13.2□□□□□ -0.3
HOXC6-201ENST00000243108 BTF3L4Q96K17 158 aa13.2□□□□□ -0.3
HOXC6-201ENST00000243108 C17orf77Q96MU5 243 aa13.2□□□□□ -0.3
HOXC6-201ENST00000243108 GPR61Q9BZJ8 451 aa13.2□□□□□ -0.3
HOXC6-201ENST00000243108 V9GYV3 84 aa13.2□□□□□ -0.3
HOXC6-201ENST00000243108 PHOX2AO14813 284 aa13.19□□□□□ -0.3
HOXC6-201ENST00000243108 RPL7P18124 248 aaKnown RBP13.19□□□□□ -0.3
HOXC6-201ENST00000243108 ERVFC1-1P60608 527 aa13.19□□□□□ -0.3
HOXC6-201ENST00000243108 DEFB121Q5J5C9 76 aa13.19□□□□□ -0.3
HOXC6-201ENST00000243108 BAGE2Q86Y30 109 aa13.19□□□□□ -0.3
HOXC6-201ENST00000243108 FMC1Q96HJ9 113 aa13.19□□□□□ -0.3
HOXC6-201ENST00000243108 IL36BQ9NZH7 164 aa13.19□□□□□ -0.3
HOXC6-201ENST00000243108 TRAV9-1A0A075B6T8 112 aa13.19□□□□□ -0.3
HOXC6-201ENST00000243108 PPP5D1E7EU14 171 aa13.19□□□□□ -0.3
HOXC6-201ENST00000243108 TRGC2P03986 189 aa13.19□□□□□ -0.3
HOXC6-201ENST00000243108 FAM3BP58499 235 aaPredicted RBP13.19□□□□□ -0.3
HOXC6-201ENST00000243108 UBE2G1P62253 170 aa13.19□□□□□ -0.3
HOXC6-201ENST00000243108 RELQ04864 619 aaPredicted RBP13.19□□□□□ -0.3
HOXC6-201ENST00000243108 EXOC3-AS1Q8N2X6 119 aa13.19□□□□□ -0.3
HOXC6-201ENST00000243108 OR1N2Q8NGR9 330 aa13.19□□□□□ -0.3
HOXC6-201ENST00000243108 DPF1Q92782 380 aa13.19□□□□□ -0.3
HOXC6-201ENST00000243108 USMG5Q96IX5 58 aa13.19□□□□□ -0.3
HOXC6-201ENST00000243108 C5orf52A6NGY3 159 aa13.18□□□□□ -0.3
HOXC6-201ENST00000243108 SLC17A3O00476 420 aa13.18□□□□□ -0.3
HOXC6-201ENST00000243108 TPPP2P59282 170 aa13.18□□□□□ -0.3
HOXC6-201ENST00000243108 FAM231DQ6ZW35 169 aa13.18□□□□□ -0.3
HOXC6-201ENST00000243108 MLST8Q9BVC4 326 aa13.18□□□□□ -0.3
HOXC6-201ENST00000243108 SAV1Q9H4B6 383 aaPredicted RBP13.18□□□□□ -0.3
HOXC6-201ENST00000243108 IGHV3-35A0A0C4DH35 117 aa13.17□□□□□ -0.3
HOXC6-201ENST00000243108 TRBV6-1A0A0K0K1D8 114 aa13.17□□□□□ -0.3
HOXC6-201ENST00000243108 LTAP01374 205 aa13.17□□□□□ -0.3
HOXC6-201ENST00000243108 MGST1P10620 155 aaKnown RBP13.17□□□□□ -0.3
HOXC6-201ENST00000243108 GPR82Q96P67 336 aa13.17□□□□□ -0.3
HOXC6-201ENST00000243108 RNASE7Q9H1E1 156 aaKnown RBP13.17□□□□□ -0.3
HOXC6-201ENST00000243108 S100A6P06703 90 aa13.16□□□□□ -0.3
HOXC6-201ENST00000243108 IBA57Q5T440 356 aaKnown RBP13.16□□□□□ -0.3
HOXC6-201ENST00000243108 NHLRC2Q8NBF2 726 aa13.16□□□□□ -0.3
HOXC6-201ENST00000243108 CMTM2Q8TAZ6 248 aa13.16□□□□□ -0.3
HOXC6-201ENST00000243108 RPH3ALQ9UNE2 315 aa13.16□□□□□ -0.3
HOXC6-201ENST00000243108 ZNF253O75346 499 aa13.16□□□□□ -0.3
HOXC6-201ENST00000243108 C9orf66Q5T8R8 295 aa13.16□□□□□ -0.3
HOXC6-201ENST00000243108 OR8I2Q8N0Y5 310 aa13.16□□□□□ -0.3
HOXC6-201ENST00000243108 ARL6IP6Q8N6S5 226 aa13.16□□□□□ -0.3
HOXC6-201ENST00000243108 SMAD5-AS1Q9Y6J3 95 aa13.16□□□□□ -0.3
HOXC6-201ENST00000243108 SORL1Q92673 2214 aa13.15□□□□□ -0.3
HOXC6-201ENST00000243108 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP13.15□□□□□ -0.3
HOXC6-201ENST00000243108 BUB3O43684 328 aa13.15□□□□□ -0.3
HOXC6-201ENST00000243108 HIST1H2BKO60814 126 aa13.15□□□□□ -0.3
HOXC6-201ENST00000243108 IGLV2-11P01706 119 aa13.15□□□□□ -0.3
HOXC6-201ENST00000243108 IGHV3-11P01762 117 aa13.15□□□□□ -0.3
HOXC6-201ENST00000243108 HIST1H2BJP06899 126 aa13.15□□□□□ -0.3
HOXC6-201ENST00000243108 HIST1H2BOP23527 126 aa13.15□□□□□ -0.3
HOXC6-201ENST00000243108 HIST1H2BBP33778 126 aa13.15□□□□□ -0.3
HOXC6-201ENST00000243108 SLURP1P55000 103 aa13.15□□□□□ -0.3
HOXC6-201ENST00000243108 HIST1H2BDP58876 126 aa13.15□□□□□ -0.3
HOXC6-201ENST00000243108 SNRPEP62304 92 aaKnown RBP13.15□□□□□ -0.3
HOXC6-201ENST00000243108 HIST1H2BCP62807 126 aa13.15□□□□□ -0.3
HOXC6-201ENST00000243108 HIST2H2BEQ16778 126 aa13.15□□□□□ -0.3
HOXC6-201ENST00000243108 RPEL1Q2QD12 228 aa13.15□□□□□ -0.3
HOXC6-201ENST00000243108 HIST2H2BFQ5QNW6 126 aaPredicted RBP13.15□□□□□ -0.3
HOXC6-201ENST00000243108 FRZBQ92765 325 aa13.15□□□□□ -0.3
HOXC6-201ENST00000243108 DLX4Q92988 240 aaPredicted RBP13.15□□□□□ -0.3
HOXC6-201ENST00000243108 HIST1H2BHQ93079 126 aa13.15□□□□□ -0.3
HOXC6-201ENST00000243108 PRR25Q96S07 402 aa13.15□□□□□ -0.3
HOXC6-201ENST00000243108 HIST1H2BNQ99877 126 aa13.15□□□□□ -0.3
HOXC6-201ENST00000243108 HIST1H2BMQ99879 126 aa13.15□□□□□ -0.3
HOXC6-201ENST00000243108 U3KQE9 123 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 76.5 ms