RNA–Protein interactions for RNA: ENST00000236850.4

APOA1-201, Transcript of apolipoprotein A1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene APOA1, Length 1,227 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOA1-201ENST00000236850 ZNF503Q96F45 646 aa11.29□□□□□ -0.6
APOA1-201ENST00000236850 PAXXQ9BUH6 204 aa11.29□□□□□ -0.6
APOA1-201ENST00000236850 C1QTNF4Q9BXJ3 329 aa11.29□□□□□ -0.6
APOA1-201ENST00000236850 MAP1LC3BQ9GZQ8 125 aa11.29□□□□□ -0.6
APOA1-201ENST00000236850 OR51M1Q9H341 326 aa11.29□□□□□ -0.6
APOA1-201ENST00000236850 MRPS12O15235 138 aaKnown RBP11.28□□□□□ -0.6
APOA1-201ENST00000236850 UBE2L3P68036 154 aaKnown RBP11.28□□□□□ -0.6
APOA1-201ENST00000236850 SFT2D1Q8WV19 159 aa11.28□□□□□ -0.6
APOA1-201ENST00000236850 LINC00052Q96N35 136 aa11.28□□□□□ -0.6
APOA1-201ENST00000236850 TMEM14CQ9P0S9 112 aa11.28□□□□□ -0.6
APOA1-201ENST00000236850 H3BQ15 152 aa11.27□□□□□ -0.61
APOA1-201ENST00000236850 CXorf1O96002 111 aa11.27□□□□□ -0.61
APOA1-201ENST00000236850 GCHFRP30047 84 aa11.27□□□□□ -0.61
APOA1-201ENST00000236850 PQLC2Q6ZP29 291 aa11.27□□□□□ -0.61
APOA1-201ENST00000236850 BLNKQ8WV28 456 aa11.27□□□□□ -0.61
APOA1-201ENST00000236850 MBD3L1Q8WWY6 194 aa11.27□□□□□ -0.61
APOA1-201ENST00000236850 C16orf92Q96LL3 132 aa11.27□□□□□ -0.61
APOA1-201ENST00000236850 C17orf77Q96MU5 243 aa11.27□□□□□ -0.61
APOA1-201ENST00000236850 TMPRSS5Q9H3S3 457 aa11.27□□□□□ -0.61
APOA1-201ENST00000236850 H3BMM0 161 aa11.26□□□□□ -0.61
APOA1-201ENST00000236850 IGLC2P0DOY2 106 aa11.26□□□□□ -0.61
APOA1-201ENST00000236850 HLA-DRB4P13762 266 aa11.26□□□□□ -0.61
APOA1-201ENST00000236850 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa11.26□□□□□ -0.61
APOA1-201ENST00000236850 FOXI2Q6ZQN5 318 aa11.26□□□□□ -0.61
APOA1-201ENST00000236850 FXYD5Q96DB9 178 aa11.26□□□□□ -0.61
APOA1-201ENST00000236850 C11orf68Q9H3H3 251 aaKnown RBP11.26□□□□□ -0.61
APOA1-201ENST00000236850 ZNF586Q9NXT0 402 aa11.26□□□□□ -0.61
APOA1-201ENST00000236850 HLA-DRB4X5D2U9 266 aa11.26□□□□□ -0.61
APOA1-201ENST00000236850 A0A087X0K7 114 aa11.25□□□□□ -0.61
APOA1-201ENST00000236850 CXorf65A6NEN9 183 aa11.25□□□□□ -0.61
APOA1-201ENST00000236850 HIST1H1EP10412 219 aaKnown RBP11.25□□□□□ -0.61
APOA1-201ENST00000236850 BLOC1S1P78537 153 aa11.25□□□□□ -0.61
APOA1-201ENST00000236850 EBLN2Q6P2I7 272 aa11.25□□□□□ -0.61
APOA1-201ENST00000236850 CLUHP3Q96NS8 147 aa11.25□□□□□ -0.61
APOA1-201ENST00000236850 CSMD3Q7Z407 3707 aa11.25□□□□□ -0.61
APOA1-201ENST00000236850 NUPR2A6NF83 97 aa11.24□□□□□ -0.61
APOA1-201ENST00000236850 SLC17A3O00476 420 aa11.24□□□□□ -0.61
APOA1-201ENST00000236850 SOCS3O14543 225 aa11.24□□□□□ -0.61
APOA1-201ENST00000236850 NBEAP1P0C6P0 100 aa11.24□□□□□ -0.61
APOA1-201ENST00000236850 MIFP14174 115 aa11.24□□□□□ -0.61
APOA1-201ENST00000236850 ZNF767PQ75MW2 155 aa11.24□□□□□ -0.61
APOA1-201ENST00000236850 LRRC20Q8TCA0 184 aa11.24□□□□□ -0.61
APOA1-201ENST00000236850 SAT2Q96F10 170 aaPredicted RBP11.24□□□□□ -0.61
APOA1-201ENST00000236850 HRH4Q9H3N8 390 aa11.24□□□□□ -0.61
APOA1-201ENST00000236850 SAV1Q9H4B6 383 aaPredicted RBP11.24□□□□□ -0.61
APOA1-201ENST00000236850 TRBV19A0A075B6N1 114 aa11.23□□□□□ -0.61
APOA1-201ENST00000236850 LCE6AA0A183 80 aa11.23□□□□□ -0.61
APOA1-201ENST00000236850 TEX46H3BTG2 121 aa11.23□□□□□ -0.61
APOA1-201ENST00000236850 HBE1P02100 147 aa11.23□□□□□ -0.61
APOA1-201ENST00000236850 GIG44P09565 113 aaPredicted RBP11.23□□□□□ -0.61
APOA1-201ENST00000236850 CCL20P78556 96 aa11.23□□□□□ -0.61
APOA1-201ENST00000236850 IGFL4Q6B9Z1 124 aa11.23□□□□□ -0.61
APOA1-201ENST00000236850 TMEM167BQ9NRX6 74 aa11.23□□□□□ -0.61
APOA1-201ENST00000236850 KLK5Q9Y337 293 aaPredicted RBP11.23□□□□□ -0.61
APOA1-201ENST00000236850 HLA-DMBP28068 263 aa11.22□□□□□ -0.61
APOA1-201ENST00000236850 UBE2G2P60604 165 aa11.22□□□□□ -0.61
APOA1-201ENST00000236850 PMS2P11Q13670 270 aa11.22□□□□□ -0.61
APOA1-201ENST00000236850 GUK1Q16774 197 aa11.22□□□□□ -0.61
APOA1-201ENST00000236850 C11orf45Q8TAV5 145 aa11.22□□□□□ -0.61
APOA1-201ENST00000236850 TRAV1-1A0A0B4J248 108 aa11.21□□□□□ -0.61
APOA1-201ENST00000236850 NDUFB4O95168 129 aa11.21□□□□□ -0.61
APOA1-201ENST00000236850 NMBP08949 121 aa11.21□□□□□ -0.61
APOA1-201ENST00000236850 PRB4P10163 310 aaPredicted RBP11.21□□□□□ -0.61
APOA1-201ENST00000236850 RAB14P61106 215 aa11.21□□□□□ -0.61
APOA1-201ENST00000236850 RANP62826 216 aaKnown RBP11.21□□□□□ -0.61
APOA1-201ENST00000236850 RNF182Q8N6D2 247 aa11.21□□□□□ -0.61
APOA1-201ENST00000236850 OR4B1Q8NGF8 309 aa11.21□□□□□ -0.61
APOA1-201ENST00000236850 ZNF331Q9NQX6 463 aaPredicted RBP11.21□□□□□ -0.61
APOA1-201ENST00000236850 GNG13Q9P2W3 67 aa11.21□□□□□ -0.61
APOA1-201ENST00000236850 XCL2Q9UBD3 114 aa11.21□□□□□ -0.61
APOA1-201ENST00000236850 TRAV8-2A0A0B4J237 113 aa11.2□□□□□ -0.62
APOA1-201ENST00000236850 A0A0J9YX75 114 aa11.2□□□□□ -0.62
APOA1-201ENST00000236850 DUSP14O95147 198 aaKnown RBP11.2□□□□□ -0.62
APOA1-201ENST00000236850 PSG9Q00887 426 aa11.2□□□□□ -0.62
APOA1-201ENST00000236850 CEMP1Q6PRD7 247 aaPredicted RBP11.2□□□□□ -0.62
APOA1-201ENST00000236850 EXOC3-AS1Q8N2X6 119 aa11.2□□□□□ -0.62
APOA1-201ENST00000236850 CSNK1G2-AS1Q8NCQ2 148 aa11.2□□□□□ -0.62
APOA1-201ENST00000236850 SUN5Q8TC36 379 aa11.2□□□□□ -0.62
APOA1-201ENST00000236850 SLC50A1Q9BRV3 221 aa11.2□□□□□ -0.62
APOA1-201ENST00000236850 Q9H3A6 140 aa11.2□□□□□ -0.62
APOA1-201ENST00000236850 CLEC5AQ9NY25 188 aa11.2□□□□□ -0.62
APOA1-201ENST00000236850 PDE6HQ13956 83 aa11.19□□□□□ -0.62
APOA1-201ENST00000236850 GDF5OSQ5U4N7 250 aa11.19□□□□□ -0.62
APOA1-201ENST00000236850 Q8NAQ8 132 aa11.19□□□□□ -0.62
APOA1-201ENST00000236850 C20orf173Q96LM9 149 aa11.19□□□□□ -0.62
APOA1-201ENST00000236850 AAMDCQ9H7C9 122 aa11.19□□□□□ -0.62
APOA1-201ENST00000236850 YTHDF2Q9Y5A9 579 aaKnown RBP11.19□□□□□ -0.62
APOA1-201ENST00000236850 STARD9Q9P2P6 4700 aa11.18□□□□□ -0.62
APOA1-201ENST00000236850 SMIM9A6NGZ8 99 aa11.18□□□□□ -0.62
APOA1-201ENST00000236850 PAGE4O60829 102 aa11.18□□□□□ -0.62
APOA1-201ENST00000236850 ZNF253O75346 499 aa11.18□□□□□ -0.62
APOA1-201ENST00000236850 IGKV3-20P01619 116 aa11.18□□□□□ -0.62
APOA1-201ENST00000236850 AMBPP02760 352 aa11.18□□□□□ -0.62
APOA1-201ENST00000236850 ICAM4Q14773 271 aa11.18□□□□□ -0.62
APOA1-201ENST00000236850 LYPD6BQ8NI32 183 aa11.18□□□□□ -0.62
APOA1-201ENST00000236850 PHLDA1Q8WV24 401 aaPredicted RBP11.18□□□□□ -0.62
APOA1-201ENST00000236850 IGHV4-28A0A0C4DH34 117 aa11.17□□□□□ -0.62
APOA1-201ENST00000236850 PGPA6NDG6 321 aa11.17□□□□□ -0.62
APOA1-201ENST00000236850 FAM74A7A6NL05 159 aa11.17□□□□□ -0.62
APOA1-201ENST00000236850 RGS13O14921 159 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms