RNA–Protein interactions for RNA: ENST00000219281.7

USB1-201, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USB1, Length 2,282 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-201ENST00000219281 C12orf54Q6X4T0 127 aa13.53□□□□□ -0.24
USB1-201ENST00000219281 OR4C5Q8NGB2 326 aa13.53□□□□□ -0.24
USB1-201ENST00000219281 FANCD2OSQ96PS1 177 aa13.53□□□□□ -0.24
USB1-201ENST00000219281 TRAV30A0A087WSZ9 112 aa13.52□□□□□ -0.24
USB1-201ENST00000219281 SH2D1AO60880 128 aa13.52□□□□□ -0.24
USB1-201ENST00000219281 NDUFA3O95167 84 aa13.52□□□□□ -0.24
USB1-201ENST00000219281 MFAP4P55083 255 aa13.52□□□□□ -0.24
USB1-201ENST00000219281 PDE6HQ13956 83 aa13.52□□□□□ -0.24
USB1-201ENST00000219281 IGKV2-40A0A087WW87 121 aaPredicted RBP13.52□□□□□ -0.25
USB1-201ENST00000219281 IGKV2D-40P01614 121 aaPredicted RBP13.52□□□□□ -0.25
USB1-201ENST00000219281 IGHV3-23P01764 117 aa13.52□□□□□ -0.25
USB1-201ENST00000219281 AMN1Q8IY45 258 aa13.52□□□□□ -0.25
USB1-201ENST00000219281 DEFB125Q8N687 156 aa13.52□□□□□ -0.25
USB1-201ENST00000219281 OR11H6Q8NGC7 330 aa13.52□□□□□ -0.25
USB1-201ENST00000219281 IGLV11-55A0A075B6I3 123 aa13.51□□□□□ -0.25
USB1-201ENST00000219281 CBY3A6NI87 242 aa13.51□□□□□ -0.25
USB1-201ENST00000219281 FOXE3Q13461 319 aa13.51□□□□□ -0.25
USB1-201ENST00000219281 C5orf64Q2M2E5 130 aa13.51□□□□□ -0.25
USB1-201ENST00000219281 OR8A1Q8NGG7 326 aa13.51□□□□□ -0.25
USB1-201ENST00000219281 SIGLEC8Q9NYZ4 499 aa13.51□□□□□ -0.25
USB1-201ENST00000219281 A0A096LNJ9 63 aa13.51□□□□□ -0.25
USB1-201ENST00000219281 OR2T8A6NH00 312 aa13.51□□□□□ -0.25
USB1-201ENST00000219281 F8W735 103 aaPredicted RBP13.51□□□□□ -0.25
USB1-201ENST00000219281 SNAI2O43623 268 aa13.51□□□□□ -0.25
USB1-201ENST00000219281 HIST1H1AQ02539 215 aaPredicted RBP13.51□□□□□ -0.25
USB1-201ENST00000219281 S100A7AQ86SG5 101 aa13.51□□□□□ -0.25
USB1-201ENST00000219281 TACC2O95359 2948 aa13.5□□□□□ -0.25
USB1-201ENST00000219281 K7EP13 123 aa13.5□□□□□ -0.25
USB1-201ENST00000219281 COX8AP10176 69 aa13.5□□□□□ -0.25
USB1-201ENST00000219281 CEACAM3P40198 252 aa13.5□□□□□ -0.25
USB1-201ENST00000219281 C21orf62-AS1Q17RA5 79 aa13.5□□□□□ -0.25
USB1-201ENST00000219281 FAM104BQ5XKR9 115 aa13.5□□□□□ -0.25
USB1-201ENST00000219281 PRELID3AQ96N28 172 aa13.5□□□□□ -0.25
USB1-201ENST00000219281 GPR183P32249 361 aa13.5□□□□□ -0.25
USB1-201ENST00000219281 FXYD7P58549 80 aa13.5□□□□□ -0.25
USB1-201ENST00000219281 PSG9Q00887 426 aa13.5□□□□□ -0.25
USB1-201ENST00000219281 LY6DQ14210 128 aa13.5□□□□□ -0.25
USB1-201ENST00000219281 U3KQK5 164 aa13.5□□□□□ -0.25
USB1-201ENST00000219281 NCBP2LA6PVI3 153 aaKnown RBP13.49□□□□□ -0.25
USB1-201ENST00000219281 NPIPB5A8MRT5 1133 aa13.49□□□□□ -0.25
USB1-201ENST00000219281 NDPQ00604 133 aa13.49□□□□□ -0.25
USB1-201ENST00000219281 ARPC1AQ92747 370 aa13.49□□□□□ -0.25
USB1-201ENST00000219281 C21orf62Q9NYP8 219 aa13.49□□□□□ -0.25
USB1-201ENST00000219281 IGFL4Q6B9Z1 124 aa13.48□□□□□ -0.25
USB1-201ENST00000219281 C2orf91Q6ZV80 131 aa13.48□□□□□ -0.25
USB1-201ENST00000219281 HRNRQ86YZ3 2850 aaPredicted RBP13.48□□□□□ -0.25
USB1-201ENST00000219281 PCP4P48539 62 aa13.48□□□□□ -0.25
USB1-201ENST00000219281 RBX1P62877 108 aa13.48□□□□□ -0.25
USB1-201ENST00000219281 MRPL51Q4U2R6 128 aaKnown RBP13.48□□□□□ -0.25
USB1-201ENST00000219281 ORMDL3Q8N138 153 aa13.48□□□□□ -0.25
USB1-201ENST00000219281 EGR2P11161 476 aaPredicted RBP13.47□□□□□ -0.25
USB1-201ENST00000219281 ZNF562Q6V9R5 426 aa13.47□□□□□ -0.25
USB1-201ENST00000219281 PIP4P2Q8N4L2 257 aa13.47□□□□□ -0.25
USB1-201ENST00000219281 TTC9CQ8N5M4 171 aa13.47□□□□□ -0.25
USB1-201ENST00000219281 Q8TAT8 98 aa13.47□□□□□ -0.25
USB1-201ENST00000219281 ZNF48Q96MX3 618 aaPredicted RBP13.47□□□□□ -0.25
USB1-201ENST00000219281 PRR25Q96S07 402 aa13.47□□□□□ -0.25
USB1-201ENST00000219281 SPTBN1Q01082 2364 aaKnown RBP13.47□□□□□ -0.25
USB1-201ENST00000219281 ITPR1Q14643 2758 aa13.47□□□□□ -0.25
USB1-201ENST00000219281 ARHGAP32A7KAX9 2087 aa13.47□□□□□ -0.25
USB1-201ENST00000219281 ODF3BA8MYP8 253 aa13.47□□□□□ -0.25
USB1-201ENST00000219281 SMKR1H3BMG3 65 aa13.47□□□□□ -0.25
USB1-201ENST00000219281 RHOGP84095 191 aa13.47□□□□□ -0.25
USB1-201ENST00000219281 SAPCD1Q5SSQ6 148 aa13.47□□□□□ -0.25
USB1-201ENST00000219281 CD5LO43866 347 aa13.46□□□□□ -0.25
USB1-201ENST00000219281 RPL7P18124 248 aaKnown RBP13.46□□□□□ -0.25
USB1-201ENST00000219281 ZNF80P51504 273 aaPredicted RBP13.46□□□□□ -0.25
USB1-201ENST00000219281 ANKRD39Q53RE8 183 aa13.46□□□□□ -0.25
USB1-201ENST00000219281 AMMECR1LQ6DCA0 310 aa13.46□□□□□ -0.25
USB1-201ENST00000219281 DYNAPQ8N1N2 210 aa13.46□□□□□ -0.25
USB1-201ENST00000219281 VGLL1Q99990 258 aa13.46□□□□□ -0.25
USB1-201ENST00000219281 HIVEP3Q5T1R4 2406 aa13.46□□□□□ -0.26
USB1-201ENST00000219281 HLA-DMBP28068 263 aa13.46□□□□□ -0.26
USB1-201ENST00000219281 TWIST1Q15672 202 aa13.46□□□□□ -0.26
USB1-201ENST00000219281 SMAD5-AS1Q9Y6J3 95 aa13.46□□□□□ -0.26
USB1-201ENST00000219281 IGHV3OR16-8A0A075B7F1 116 aa13.45□□□□□ -0.26
USB1-201ENST00000219281 M0R1W7 72 aa13.45□□□□□ -0.26
USB1-201ENST00000219281 PRTN3P24158 256 aa13.45□□□□□ -0.26
USB1-201ENST00000219281 TIMD4Q96H15 378 aa13.45□□□□□ -0.26
USB1-201ENST00000219281 TCTAP57738 103 aa13.44□□□□□ -0.26
USB1-201ENST00000219281 COX8CQ7Z4L0 72 aa13.44□□□□□ -0.26
USB1-201ENST00000219281 FER1L6-AS1Q8NA97 138 aa13.44□□□□□ -0.26
USB1-201ENST00000219281 PRORYQ9H606 182 aa13.44□□□□□ -0.26
USB1-201ENST00000219281 THYN1Q9P016 225 aa13.44□□□□□ -0.26
USB1-201ENST00000219281 CTSGP08311 255 aa13.44□□□□□ -0.26
USB1-201ENST00000219281 CKS2P33552 79 aa13.44□□□□□ -0.26
USB1-201ENST00000219281 CACNG7P62955 275 aa13.44□□□□□ -0.26
USB1-201ENST00000219281 RABAC1Q9UI14 185 aa13.44□□□□□ -0.26
USB1-201ENST00000219281 CSMD1Q96PZ7 3565 aa13.44□□□□□ -0.26
USB1-201ENST00000219281 IGHV3-35A0A0C4DH35 117 aa13.43□□□□□ -0.26
USB1-201ENST00000219281 NPYP01303 97 aa13.43□□□□□ -0.26
USB1-201ENST00000219281 IGHG4P01861 327 aa13.43□□□□□ -0.26
USB1-201ENST00000219281 FGF6P10767 208 aa13.43□□□□□ -0.26
USB1-201ENST00000219281 LGALS9BQ3B8N2 356 aa13.43□□□□□ -0.26
USB1-201ENST00000219281 LGALS9CQ6DKI2 356 aa13.43□□□□□ -0.26
USB1-201ENST00000219281 HBDP02042 147 aa13.43□□□□□ -0.26
USB1-201ENST00000219281 BMI1P35226 326 aa13.42□□□□□ -0.26
USB1-201ENST00000219281 RPS20P60866 119 aaKnown RBP13.42□□□□□ -0.26
USB1-201ENST00000219281 PAX8Q06710 450 aa13.42□□□□□ -0.26
USB1-201ENST00000219281 TMEM97Q5BJF2 176 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms