RNA–Protein interactions for RNA: ENST00000040877.1

TARBP1-201, Transcript of TAR (HIV-1) RNA binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TARBP1, Length 5,130 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARBP1-201ENST00000040877 FRMPD3Q5JV73 1810 aa18.59■□□□□ 0.57
TARBP1-201ENST00000040877 NUP210Q8TEM1 1887 aaPredicted RBP18.59■□□□□ 0.57
TARBP1-201ENST00000040877 TRAV8-2A0A0B4J237 113 aa18.59■□□□□ 0.57
TARBP1-201ENST00000040877 CSTL1Q9H114 145 aa18.59■□□□□ 0.57
TARBP1-201ENST00000040877 TRAV16A0A0A6YYK6 109 aaPredicted RBP18.58■□□□□ 0.57
TARBP1-201ENST00000040877 VOPP1Q96AW1 172 aa18.58■□□□□ 0.57
TARBP1-201ENST00000040877 DOCK7Q96N67 2140 aa18.58■□□□□ 0.57
TARBP1-201ENST00000040877 LINC00158P58513 81 aa18.58■□□□□ 0.56
TARBP1-201ENST00000040877 IGHV3-73A0A0B4J1V6 119 aa18.58■□□□□ 0.56
TARBP1-201ENST00000040877 UBE2E2Q96LR5 201 aa18.58■□□□□ 0.56
TARBP1-201ENST00000040877 RNF138Q8WVD3 245 aa18.57■□□□□ 0.56
TARBP1-201ENST00000040877 TRBV19A0A075B6N1 114 aa18.57■□□□□ 0.56
TARBP1-201ENST00000040877 FXYD7P58549 80 aa18.57■□□□□ 0.56
TARBP1-201ENST00000040877 SFTA2Q6UW10 78 aa18.57■□□□□ 0.56
TARBP1-201ENST00000040877 IL17RELQ6ZVW7 336 aa18.57■□□□□ 0.56
TARBP1-201ENST00000040877 LSM4Q9Y4Z0 139 aaKnown RBP18.57■□□□□ 0.56
TARBP1-201ENST00000040877 HEATR5AQ86XA9 2040 aa18.57■□□□□ 0.56
TARBP1-201ENST00000040877 MRPL52Q86TS9 123 aaKnown RBP18.57■□□□□ 0.56
TARBP1-201ENST00000040877 ANAPC13Q9BS18 74 aa18.57■□□□□ 0.56
TARBP1-201ENST00000040877 PGPEP1Q9NXJ5 209 aa18.57■□□□□ 0.56
TARBP1-201ENST00000040877 EREGO14944 169 aa18.57■□□□□ 0.56
TARBP1-201ENST00000040877 POU2AF1Q16633 256 aa18.57■□□□□ 0.56
TARBP1-201ENST00000040877 LIME1Q9H400 295 aa18.57■□□□□ 0.56
TARBP1-201ENST00000040877 TDGF1P3P51864 188 aa18.56■□□□□ 0.56
TARBP1-201ENST00000040877 MYLKQ15746 1914 aa18.56■□□□□ 0.56
TARBP1-201ENST00000040877 ARMS2P0C7Q2 107 aa18.56■□□□□ 0.56
TARBP1-201ENST00000040877 ERCC8Q13216 396 aa18.56■□□□□ 0.56
TARBP1-201ENST00000040877 UBE2V1Q13404 147 aa18.56■□□□□ 0.56
TARBP1-201ENST00000040877 DEFB121Q5J5C9 76 aa18.56■□□□□ 0.56
TARBP1-201ENST00000040877 Q8NFD4 153 aa18.56■□□□□ 0.56
TARBP1-201ENST00000040877 TMEM14CQ9P0S9 112 aa18.56■□□□□ 0.56
TARBP1-201ENST00000040877 PRB4P10163 310 aaPredicted RBP18.56■□□□□ 0.56
TARBP1-201ENST00000040877 PAX9P55771 341 aa18.56■□□□□ 0.56
TARBP1-201ENST00000040877 PFN1P07737 140 aaKnown RBP18.56■□□□□ 0.56
TARBP1-201ENST00000040877 DUX4L9Q6RFH8 374 aaPredicted RBP18.56■□□□□ 0.56
TARBP1-201ENST00000040877 SAMD5Q5TGI4 173 aa18.55■□□□□ 0.56
TARBP1-201ENST00000040877 TRPT1Q86TN4 253 aaKnown RBP18.55■□□□□ 0.56
TARBP1-201ENST00000040877 G3V318 75 aa18.55■□□□□ 0.56
TARBP1-201ENST00000040877 CREBBPQ92793 2442 aa18.55■□□□□ 0.56
TARBP1-201ENST00000040877 IGKV1-39P01597 117 aa18.54■□□□□ 0.56
TARBP1-201ENST00000040877 IGKV1D-39P04432 117 aa18.54■□□□□ 0.56
TARBP1-201ENST00000040877 A8MWP6 167 aa18.54■□□□□ 0.56
TARBP1-201ENST00000040877 H3BUA1 57 aa18.54■□□□□ 0.56
TARBP1-201ENST00000040877 ELANEP08246 267 aa18.54■□□□□ 0.56
TARBP1-201ENST00000040877 ZNF479Q96JC4 524 aa18.54■□□□□ 0.56
TARBP1-201ENST00000040877 CADP27708 2225 aa18.54■□□□□ 0.56
TARBP1-201ENST00000040877 IGHV3-53P01767 116 aa18.54■□□□□ 0.56
TARBP1-201ENST00000040877 S100A7L2Q5SY68 101 aa18.54■□□□□ 0.56
TARBP1-201ENST00000040877 NOTCH4Q99466 2003 aa18.54■□□□□ 0.56
TARBP1-201ENST00000040877 M0R2P5 195 aa18.53■□□□□ 0.56
TARBP1-201ENST00000040877 ERG28Q9UKR5 140 aa18.53■□□□□ 0.56
TARBP1-201ENST00000040877 AMN1Q8IY45 258 aa18.53■□□□□ 0.56
TARBP1-201ENST00000040877 MST1LQ2TV78 715 aa18.52■□□□□ 0.56
TARBP1-201ENST00000040877 TMEM158Q8WZ71 300 aa18.52■□□□□ 0.56
TARBP1-201ENST00000040877 C3orf79P0CE67 100 aa18.52■□□□□ 0.56
TARBP1-201ENST00000040877 NAA38Q9BRA0 125 aaKnown RBP18.52■□□□□ 0.56
TARBP1-201ENST00000040877 WT1-ASQ06250 92 aa18.52■□□□□ 0.56
TARBP1-201ENST00000040877 HELZP42694 1942 aaKnown RBP18.52■□□□□ 0.55
TARBP1-201ENST00000040877 C9JQL5 133 aa18.52■□□□□ 0.55
TARBP1-201ENST00000040877 MCRIP2Q9BUT9 160 aaKnown RBP18.52■□□□□ 0.55
TARBP1-201ENST00000040877 SHISA9B4DS77 424 aa18.51■□□□□ 0.55
TARBP1-201ENST00000040877 TCF15Q12870 199 aa18.51■□□□□ 0.55
TARBP1-201ENST00000040877 MPV17L2Q567V2 206 aa18.51■□□□□ 0.55
TARBP1-201ENST00000040877 H3BRN7 92 aa18.51■□□□□ 0.55
TARBP1-201ENST00000040877 LY6G5BQ8NDX9 201 aa18.51■□□□□ 0.55
TARBP1-201ENST00000040877 C1orf159Q96HA4 380 aa18.51■□□□□ 0.55
TARBP1-201ENST00000040877 GGTLC3B5MD39 225 aa18.51■□□□□ 0.55
TARBP1-201ENST00000040877 PRSS46E5RG02 174 aa18.51■□□□□ 0.55
TARBP1-201ENST00000040877 DKK1O94907 266 aa18.51■□□□□ 0.55
TARBP1-201ENST00000040877 GAGE13Q4V321 117 aa18.5■□□□□ 0.55
TARBP1-201ENST00000040877 LINC00479Q96M42 142 aa18.5■□□□□ 0.55
TARBP1-201ENST00000040877 MAPK1IP1LQ8NDC0 245 aa18.5■□□□□ 0.55
TARBP1-201ENST00000040877 PCNX1Q96RV3 2341 aa18.5■□□□□ 0.55
TARBP1-201ENST00000040877 IGHV3-64A0A075B6Q5 118 aa18.5■□□□□ 0.55
TARBP1-201ENST00000040877 JPT2Q9H910 190 aa18.5■□□□□ 0.55
TARBP1-201ENST00000040877 IGHV2-70P01814 119 aa18.5■□□□□ 0.55
TARBP1-201ENST00000040877 SYS1-DBNDD2H3BUS1 97 aa18.49■□□□□ 0.55
TARBP1-201ENST00000040877 ZNF134P52741 427 aa18.49■□□□□ 0.55
TARBP1-201ENST00000040877 THAP8Q8NA92 274 aa18.49■□□□□ 0.55
TARBP1-201ENST00000040877 TMEM95Q3KNT9 176 aa18.49■□□□□ 0.55
TARBP1-201ENST00000040877 C8orf86Q6ZUL3 223 aa18.49■□□□□ 0.55
TARBP1-201ENST00000040877 YLPM1P49750 1951 aaKnown RBP18.49■□□□□ 0.55
TARBP1-201ENST00000040877 A0A087WWL8 130 aa18.49■□□□□ 0.55
TARBP1-201ENST00000040877 IGHV2-5P01817 119 aa18.49■□□□□ 0.55
TARBP1-201ENST00000040877 SS18Q15532 418 aa18.49■□□□□ 0.55
TARBP1-201ENST00000040877 ATXN8Q156A1 80 aa18.49■□□□□ 0.55
TARBP1-201ENST00000040877 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP18.48■□□□□ 0.55
TARBP1-201ENST00000040877 TNFRSF6BO95407 300 aa18.48■□□□□ 0.55
TARBP1-201ENST00000040877 IGHV4-39P01824 125 aa18.48■□□□□ 0.55
TARBP1-201ENST00000040877 MYMXA0A1B0GTQ4 84 aa18.48■□□□□ 0.55
TARBP1-201ENST00000040877 C6orf226Q5I0X4 101 aa18.48■□□□□ 0.55
TARBP1-201ENST00000040877 FAM231DQ6ZW35 169 aa18.48■□□□□ 0.55
TARBP1-201ENST00000040877 MMP23AO75900 390 aa18.48■□□□□ 0.55
TARBP1-201ENST00000040877 A0A0U1RRA0 63 aa18.47■□□□□ 0.55
TARBP1-201ENST00000040877 A8MWV9 139 aa18.47■□□□□ 0.55
TARBP1-201ENST00000040877 TCTEX1D4Q5JR98 221 aa18.47■□□□□ 0.55
TARBP1-201ENST00000040877 DEFB130BP0DP73 79 aa18.47■□□□□ 0.55
TARBP1-201ENST00000040877 DEFB130AP0DP74 79 aa18.47■□□□□ 0.55
TARBP1-201ENST00000040877 Q0VG73 95 aa18.47■□□□□ 0.55
TARBP1-201ENST00000040877 PCNX2A6NKB5 2137 aa18.47■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms