RNA–Protein interactions for RNA: ENST00000642021.1

PHGDH-233, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,794 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-233ENST00000642021 KLF17Q5JT82 389 aaPredicted RBP10.92□□□□□ -0.66
PHGDH-233ENST00000642021 OR4C5Q8NGB2 326 aa10.92□□□□□ -0.66
PHGDH-233ENST00000642021 ORAOV1Q8WV07 137 aa10.92□□□□□ -0.66
PHGDH-233ENST00000642021 TMUB1Q9BVT8 246 aa10.92□□□□□ -0.66
PHGDH-233ENST00000642021 NGBQ9NPG2 151 aa10.92□□□□□ -0.66
PHGDH-233ENST00000642021 ABCA4P78363 2273 aa10.92□□□□□ -0.66
PHGDH-233ENST00000642021 PPIAL4CA0A0B4J2A2 164 aa10.92□□□□□ -0.66
PHGDH-233ENST00000642021 PPIAL4GP0DN37 164 aa10.92□□□□□ -0.66
PHGDH-233ENST00000642021 TIMM8BQ9Y5J9 83 aaPredicted RBP10.92□□□□□ -0.66
PHGDH-233ENST00000642021 COX11Q9Y6N1 276 aa10.92□□□□□ -0.66
PHGDH-233ENST00000642021 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP10.91□□□□□ -0.66
PHGDH-233ENST00000642021 H0Y8G0 127 aa10.91□□□□□ -0.66
PHGDH-233ENST00000642021 M0R3E3 92 aa10.91□□□□□ -0.66
PHGDH-233ENST00000642021 FBLN7Q53RD9 439 aa10.91□□□□□ -0.66
PHGDH-233ENST00000642021 FAM162BQ5T6X4 162 aa10.91□□□□□ -0.66
PHGDH-233ENST00000642021 SIGLEC15Q6ZMC9 328 aa10.91□□□□□ -0.66
PHGDH-233ENST00000642021 NEU4Q8WWR8 484 aaPredicted RBP10.91□□□□□ -0.66
PHGDH-233ENST00000642021 PMCHL2Q9BQD1 86 aa10.91□□□□□ -0.66
PHGDH-233ENST00000642021 C1RLQ9NZP8 487 aa10.91□□□□□ -0.66
PHGDH-233ENST00000642021 ARHGAP32A7KAX9 2087 aa10.91□□□□□ -0.66
PHGDH-233ENST00000642021 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP10.91□□□□□ -0.66
PHGDH-233ENST00000642021 LY6LH3BQJ8 138 aa10.91□□□□□ -0.66
PHGDH-233ENST00000642021 CNIH1O95406 144 aa10.91□□□□□ -0.66
PHGDH-233ENST00000642021 MPV17L2Q567V2 206 aa10.91□□□□□ -0.66
PHGDH-233ENST00000642021 OCIAD2Q56VL3 154 aa10.91□□□□□ -0.66
PHGDH-233ENST00000642021 ZNF491Q8N8L2 437 aa10.91□□□□□ -0.66
PHGDH-233ENST00000642021 SHANK2-AS3Q9BTD1 123 aa10.91□□□□□ -0.66
PHGDH-233ENST00000642021 TLN1Q9Y490 2541 aaKnown RBP10.91□□□□□ -0.66
PHGDH-233ENST00000642021 TIMM23O14925 209 aa10.9□□□□□ -0.66
PHGDH-233ENST00000642021 A0A1B0GUT8 65 aa10.9□□□□□ -0.66
PHGDH-233ENST00000642021 HTR1DP28221 377 aa10.9□□□□□ -0.66
PHGDH-233ENST00000642021 RIPPLY3P57055 190 aa10.9□□□□□ -0.66
PHGDH-233ENST00000642021 ZNF48Q96MX3 618 aaPredicted RBP10.9□□□□□ -0.66
PHGDH-233ENST00000642021 PSG8Q9UQ74 426 aa10.9□□□□□ -0.66
PHGDH-233ENST00000642021 H3BRN7 92 aa10.89□□□□□ -0.67
PHGDH-233ENST00000642021 ERASQ7Z444 233 aa10.89□□□□□ -0.67
PHGDH-233ENST00000642021 BPIFA4PQ86YQ2 179 aa10.89□□□□□ -0.67
PHGDH-233ENST00000642021 LINC01560Q8TB33 94 aa10.89□□□□□ -0.67
PHGDH-233ENST00000642021 SCNM1Q9BWG6 230 aa10.89□□□□□ -0.67
PHGDH-233ENST00000642021 B9A039 149 aa10.89□□□□□ -0.67
PHGDH-233ENST00000642021 MRPS12O15235 138 aaKnown RBP10.89□□□□□ -0.67
PHGDH-233ENST00000642021 LY6HO94772 140 aa10.89□□□□□ -0.67
PHGDH-233ENST00000642021 IL4P05112 153 aa10.89□□□□□ -0.67
PHGDH-233ENST00000642021 LIPFP07098 398 aa10.89□□□□□ -0.67
PHGDH-233ENST00000642021 TPPP3Q9BW30 176 aa10.89□□□□□ -0.67
PHGDH-233ENST00000642021 ST20Q9HBF5 79 aa10.89□□□□□ -0.67
PHGDH-233ENST00000642021 HILPDAQ9Y5L2 63 aa10.89□□□□□ -0.67
PHGDH-233ENST00000642021 CEP295Q9C0D2 2601 aa10.89□□□□□ -0.67
PHGDH-233ENST00000642021 FCGR2BP31994 310 aaPredicted RBP10.88□□□□□ -0.67
PHGDH-233ENST00000642021 ZNF738Q8NE65 137 aa10.88□□□□□ -0.67
PHGDH-233ENST00000642021 C8orf49Q96NF6 230 aa10.88□□□□□ -0.67
PHGDH-233ENST00000642021 FAM106CPP0CH98 169 aa10.88□□□□□ -0.67
PHGDH-233ENST00000642021 FOXE3Q13461 319 aa10.88□□□□□ -0.67
PHGDH-233ENST00000642021 FAM106AQ4KMX7 169 aa10.88□□□□□ -0.67
PHGDH-233ENST00000642021 TMEM75Q8N9X5 138 aa10.88□□□□□ -0.67
PHGDH-233ENST00000642021 RNF125Q96EQ8 232 aa10.88□□□□□ -0.67
PHGDH-233ENST00000642021 ZNF414Q96IQ9 312 aa10.88□□□□□ -0.67
PHGDH-233ENST00000642021 ONECUT1Q9UBC0 465 aa10.88□□□□□ -0.67
PHGDH-233ENST00000642021 ASH1LQ9NR48 2969 aaKnown RBP10.88□□□□□ -0.67
PHGDH-233ENST00000642021 TRBV6-1A0A0K0K1D8 114 aa10.88□□□□□ -0.67
PHGDH-233ENST00000642021 A0A1W2PRD5 423 aa10.88□□□□□ -0.67
PHGDH-233ENST00000642021 A0A1W2PRF3 423 aa10.88□□□□□ -0.67
PHGDH-233ENST00000642021 A0A1W2PRM7 423 aa10.88□□□□□ -0.67
PHGDH-233ENST00000642021 HLA-DRB1P01911 266 aa10.88□□□□□ -0.67
PHGDH-233ENST00000642021 PSG3Q16557 428 aa10.88□□□□□ -0.67
PHGDH-233ENST00000642021 MAP1LC3CQ9BXW4 147 aa10.88□□□□□ -0.67
PHGDH-233ENST00000642021 CST9LQ9H4G1 147 aa10.88□□□□□ -0.67
PHGDH-233ENST00000642021 PTPRZ1P23471 2315 aaPredicted RBP10.87□□□□□ -0.67
PHGDH-233ENST00000642021 NUDT3O95989 172 aa10.87□□□□□ -0.67
PHGDH-233ENST00000642021 CD3EP07766 207 aa10.87□□□□□ -0.67
PHGDH-233ENST00000642021 GRNP28799 593 aaKnown RBP10.87□□□□□ -0.67
PHGDH-233ENST00000642021 TMEM191AQ9H0A3 160 aa10.87□□□□□ -0.67
PHGDH-233ENST00000642021 OR5AL1P0C617 328 aa10.87□□□□□ -0.67
PHGDH-233ENST00000642021 SHISA2Q6UWI4 295 aa10.87□□□□□ -0.67
PHGDH-233ENST00000642021 NCR2O95944 276 aa10.86□□□□□ -0.67
PHGDH-233ENST00000642021 ARF6P62330 175 aa10.86□□□□□ -0.67
PHGDH-233ENST00000642021 PET117Q6UWS5 81 aa10.86□□□□□ -0.67
PHGDH-233ENST00000642021 SCRT2Q9NQ03 307 aa10.86□□□□□ -0.67
PHGDH-233ENST00000642021 LOXL1Q08397 574 aaPredicted RBP10.86□□□□□ -0.67
PHGDH-233ENST00000642021 TCF15Q12870 199 aa10.86□□□□□ -0.67
PHGDH-233ENST00000642021 RIGQ13278 110 aa10.86□□□□□ -0.67
PHGDH-233ENST00000642021 SLC25A34Q6PIV7 304 aa10.86□□□□□ -0.67
PHGDH-233ENST00000642021 RNF5Q99942 180 aa10.86□□□□□ -0.67
PHGDH-233ENST00000642021 AP5S1Q9NUS5 200 aa10.86□□□□□ -0.67
PHGDH-233ENST00000642021 ANKHD1Q8IWZ3 2542 aaKnown RBP10.85□□□□□ -0.67
PHGDH-233ENST00000642021 TMSB15BA0A087X1C1 80 aa10.85□□□□□ -0.67
PHGDH-233ENST00000642021 MUC21A0A0G2JKD1 596 aa10.85□□□□□ -0.67
PHGDH-233ENST00000642021 MUC21A0A140T8X8 626 aa10.85□□□□□ -0.67
PHGDH-233ENST00000642021 KLRD1Q13241 179 aa10.85□□□□□ -0.67
PHGDH-233ENST00000642021 ZNF672Q499Z4 452 aaPredicted RBP10.85□□□□□ -0.67
PHGDH-233ENST00000642021 MUC21Q5SSG8 566 aa10.85□□□□□ -0.67
PHGDH-233ENST00000642021 CFHR4Q92496 578 aa10.85□□□□□ -0.67
PHGDH-233ENST00000642021 WI2-2373I1.2A0A1W2PRP0 233 aa10.85□□□□□ -0.67
PHGDH-233ENST00000642021 BVES-AS1Q5T3Y7 98 aa10.85□□□□□ -0.67
PHGDH-233ENST00000642021 FANCD2OSQ96PS1 177 aa10.85□□□□□ -0.67
PHGDH-233ENST00000642021 ZNF747Q9BV97 191 aa10.85□□□□□ -0.67
PHGDH-233ENST00000642021 TMEM213A2RRL7 107 aa10.84□□□□□ -0.67
PHGDH-233ENST00000642021 NBR2O15453 112 aa10.84□□□□□ -0.67
PHGDH-233ENST00000642021 IFI27P40305 119 aaPredicted RBP10.84□□□□□ -0.67
PHGDH-233ENST00000642021 LINC01545Q5VT33 79 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms