RNA–Protein interactions for RNA: ENST00000640957.1

SCARB2-227, Transcript of scavenger receptor class B member 2, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCARB2, Length 3,255 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-227ENST00000640957 FAM169BQ8N8A8 192 aa10.98□□□□□ -0.65
SCARB2-227ENST00000640957 SIGLEC8Q9NYZ4 499 aa10.98□□□□□ -0.65
SCARB2-227ENST00000640957 TRAV17A0A0B4J275 112 aa10.98□□□□□ -0.65
SCARB2-227ENST00000640957 A0A1B0GUT8 65 aa10.98□□□□□ -0.65
SCARB2-227ENST00000640957 DLL1O00548 723 aa10.98□□□□□ -0.65
SCARB2-227ENST00000640957 SMAD7O15105 426 aaKnown RBP10.98□□□□□ -0.65
SCARB2-227ENST00000640957 EVI2AP22794 236 aa10.98□□□□□ -0.65
SCARB2-227ENST00000640957 HSD52Q0P140 79 aa10.98□□□□□ -0.65
SCARB2-227ENST00000640957 NEGR1Q7Z3B1 354 aa10.98□□□□□ -0.65
SCARB2-227ENST00000640957 ATP5L2Q7Z4Y8 100 aa10.98□□□□□ -0.65
SCARB2-227ENST00000640957 SPRY4Q9C004 299 aa10.98□□□□□ -0.65
SCARB2-227ENST00000640957 CUBNO60494 3623 aa10.98□□□□□ -0.65
SCARB2-227ENST00000640957 KBTBD11-OT1A0A1B0GTJ5 212 aa10.97□□□□□ -0.65
SCARB2-227ENST00000640957 RAB9AP51151 201 aa10.97□□□□□ -0.65
SCARB2-227ENST00000640957 C2orf83Q53S99 150 aa10.97□□□□□ -0.65
SCARB2-227ENST00000640957 C8orf49Q96NF6 230 aa10.97□□□□□ -0.65
SCARB2-227ENST00000640957 SIGMAR1Q99720 223 aa10.97□□□□□ -0.65
SCARB2-227ENST00000640957 SRSF8Q9BRL6 282 aaKnown RBP10.97□□□□□ -0.65
SCARB2-227ENST00000640957 PTPRQQ9UMZ3 2332 aa10.97□□□□□ -0.65
SCARB2-227ENST00000640957 TCRBV4S1A1TA0A5B7 111 aa10.97□□□□□ -0.65
SCARB2-227ENST00000640957 PRR7Q8TB68 274 aa10.97□□□□□ -0.65
SCARB2-227ENST00000640957 FAM222BQ8WU58 562 aa10.97□□□□□ -0.65
SCARB2-227ENST00000640957 ZNF414Q96IQ9 312 aa10.97□□□□□ -0.65
SCARB2-227ENST00000640957 MLST8Q9BVC4 326 aa10.97□□□□□ -0.65
SCARB2-227ENST00000640957 MALRD1Q5VYJ5 2156 aa10.97□□□□□ -0.65
SCARB2-227ENST00000640957 FAM90A9PA6NNJ1 464 aa10.97□□□□□ -0.65
SCARB2-227ENST00000640957 RBP4P02753 201 aa10.97□□□□□ -0.65
SCARB2-227ENST00000640957 CNTFRP26992 372 aa10.97□□□□□ -0.65
SCARB2-227ENST00000640957 FAM27E3Q08E93 113 aa10.97□□□□□ -0.65
SCARB2-227ENST00000640957 MRPL32Q9BYC8 188 aaKnown RBP10.97□□□□□ -0.65
SCARB2-227ENST00000640957 TRAV26-1A0A087WT03 109 aa10.96□□□□□ -0.65
SCARB2-227ENST00000640957 RPS20P60866 119 aaKnown RBP10.96□□□□□ -0.65
SCARB2-227ENST00000640957 TNFRSF14Q92956 283 aa10.96□□□□□ -0.65
SCARB2-227ENST00000640957 IGHV1-18A0A0C4DH31 117 aa10.96□□□□□ -0.66
SCARB2-227ENST00000640957 SRRM5B3KS81 715 aa10.96□□□□□ -0.66
SCARB2-227ENST00000640957 TNFRSF1AP19438 455 aa10.96□□□□□ -0.66
SCARB2-227ENST00000640957 OR1L8Q8NGR8 309 aa10.96□□□□□ -0.66
SCARB2-227ENST00000640957 NDFIP1Q9BT67 221 aa10.96□□□□□ -0.66
SCARB2-227ENST00000640957 C19orf71A6NCJ1 209 aa10.96□□□□□ -0.66
SCARB2-227ENST00000640957 CGB1A6NKQ9 187 aa10.96□□□□□ -0.66
SCARB2-227ENST00000640957 TGFAP01135 160 aa10.96□□□□□ -0.66
SCARB2-227ENST00000640957 PRSS1P07477 247 aa10.96□□□□□ -0.66
SCARB2-227ENST00000640957 TMEM75Q8N9X5 138 aa10.96□□□□□ -0.66
SCARB2-227ENST00000640957 PRSS22Q9GZN4 317 aa10.96□□□□□ -0.66
SCARB2-227ENST00000640957 NCOR1P1Q9H4R4 102 aa10.96□□□□□ -0.66
SCARB2-227ENST00000640957 MSRB1Q9NZV6 116 aa10.96□□□□□ -0.66
SCARB2-227ENST00000640957 ANKHD1Q8IWZ3 2542 aaKnown RBP10.95□□□□□ -0.66
SCARB2-227ENST00000640957 GAGE12HA6NDE8 117 aa10.95□□□□□ -0.66
SCARB2-227ENST00000640957 SMIM13P0DJ93 91 aa10.95□□□□□ -0.66
SCARB2-227ENST00000640957 GATA1P15976 413 aaPredicted RBP10.95□□□□□ -0.66
SCARB2-227ENST00000640957 CCL17Q92583 94 aa10.95□□□□□ -0.66
SCARB2-227ENST00000640957 ABHD17AQ96GS6 310 aa10.95□□□□□ -0.66
SCARB2-227ENST00000640957 PRELID3AQ96N28 172 aa10.95□□□□□ -0.66
SCARB2-227ENST00000640957 IGHV3-35A0A0C4DH35 117 aa10.95□□□□□ -0.66
SCARB2-227ENST00000640957 ZNF785A8K8V0 405 aa10.95□□□□□ -0.66
SCARB2-227ENST00000640957 KIR2DS2P43631 304 aa10.95□□□□□ -0.66
SCARB2-227ENST00000640957 FAM162BQ5T6X4 162 aa10.95□□□□□ -0.66
SCARB2-227ENST00000640957 LYZL1Q6UWQ5 148 aa10.94□□□□□ -0.66
SCARB2-227ENST00000640957 NDUFA4L2Q9NRX3 87 aa10.94□□□□□ -0.66
SCARB2-227ENST00000640957 A0A1W2PPI3 338 aa10.94□□□□□ -0.66
SCARB2-227ENST00000640957 FSTL3O95633 263 aa10.94□□□□□ -0.66
SCARB2-227ENST00000640957 TNFAIP6P98066 277 aaPredicted RBP10.94□□□□□ -0.66
SCARB2-227ENST00000640957 CCDC144NLQ6NUI1 221 aa10.94□□□□□ -0.66
SCARB2-227ENST00000640957 Q86TA4 180 aa10.94□□□□□ -0.66
SCARB2-227ENST00000640957 BOD1L2Q8IYS8 172 aa10.94□□□□□ -0.66
SCARB2-227ENST00000640957 OR10X1Q8NGY0 326 aa10.94□□□□□ -0.66
SCARB2-227ENST00000640957 ARHGAP32A7KAX9 2087 aa10.94□□□□□ -0.66
SCARB2-227ENST00000640957 K7EM74 188 aa10.94□□□□□ -0.66
SCARB2-227ENST00000640957 CKS1BP61024 79 aa10.93□□□□□ -0.66
SCARB2-227ENST00000640957 OR5AN1Q8NGI8 311 aa10.93□□□□□ -0.66
SCARB2-227ENST00000640957 IFI27L1Q96BM0 104 aa10.93□□□□□ -0.66
SCARB2-227ENST00000640957 TMEM160Q9NX00 188 aa10.93□□□□□ -0.66
SCARB2-227ENST00000640957 PRR33A8MZF0 331 aa10.93□□□□□ -0.66
SCARB2-227ENST00000640957 ZNF883P0CG24 379 aa10.93□□□□□ -0.66
SCARB2-227ENST00000640957 CRIP1P50238 77 aa10.93□□□□□ -0.66
SCARB2-227ENST00000640957 Q8TAT8 98 aa10.93□□□□□ -0.66
SCARB2-227ENST00000640957 DCHS2Q6V1P9 2916 aa10.93□□□□□ -0.66
SCARB2-227ENST00000640957 C16orf97H3BN30 126 aa10.92□□□□□ -0.66
SCARB2-227ENST00000640957 NPYP01303 97 aa10.92□□□□□ -0.66
SCARB2-227ENST00000640957 MYCNOSP40205 109 aa10.92□□□□□ -0.66
SCARB2-227ENST00000640957 ZNF714Q96N38 554 aa10.92□□□□□ -0.66
SCARB2-227ENST00000640957 CKS2P33552 79 aa10.92□□□□□ -0.66
SCARB2-227ENST00000640957 MBNL2Q5VZF2 373 aaKnown RBP10.92□□□□□ -0.66
SCARB2-227ENST00000640957 SPAG8Q99932 426 aaPredicted RBP10.92□□□□□ -0.66
SCARB2-227ENST00000640957 C20orf78Q9BR46 151 aa10.92□□□□□ -0.66
SCARB2-227ENST00000640957 TWIST1Q15672 202 aa10.92□□□□□ -0.66
SCARB2-227ENST00000640957 NPIPB6E9PJ23 425 aa10.91□□□□□ -0.66
SCARB2-227ENST00000640957 KLF17Q5JT82 389 aaPredicted RBP10.91□□□□□ -0.66
SCARB2-227ENST00000640957 RIGQ13278 110 aa10.91□□□□□ -0.66
SCARB2-227ENST00000640957 ANXA2RQ3ZCQ2 193 aa10.91□□□□□ -0.66
SCARB2-227ENST00000640957 FMC1Q96HJ9 113 aa10.91□□□□□ -0.66
SCARB2-227ENST00000640957 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP10.91□□□□□ -0.662e-8■■■□□ 17.7
SCARB2-227ENST00000640957 K7EQM0 130 aa10.9□□□□□ -0.66
SCARB2-227ENST00000640957 NDUFS7O75251 213 aa10.9□□□□□ -0.66
SCARB2-227ENST00000640957 IGKV3-15P01624 115 aa10.9□□□□□ -0.66
SCARB2-227ENST00000640957 CRYBA4P53673 196 aa10.9□□□□□ -0.66
SCARB2-227ENST00000640957 ATP6V0BQ99437 205 aa10.9□□□□□ -0.66
SCARB2-227ENST00000640957 TMEM133Q9H2Q1 129 aa10.9□□□□□ -0.66
SCARB2-227ENST00000640957 KLK15Q9H2R5 256 aa10.9□□□□□ -0.66
SCARB2-227ENST00000640957 HAX1O00165 279 aa10.9□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 90 ms