RNA–Protein interactions for RNA: ENST00000635562.1

PSPC1-208, Transcript of paraspeckle component 1, humanhuman

TSL 3

Gene PSPC1, Length 422 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-208ENST00000635562 OR2T2Q6IF00 324 aa2.07□□□□□ -2.08
PSPC1-208ENST00000635562 SH2D6Q7Z4S9 175 aa2.07□□□□□ -2.08
PSPC1-208ENST00000635562 TMEM183AQ8IXX5 376 aa2.07□□□□□ -2.08
PSPC1-208ENST00000635562 Q8N2B8 174 aa2.07□□□□□ -2.08
PSPC1-208ENST00000635562 WFDC5Q8TCV5 224 aa2.07□□□□□ -2.08
PSPC1-208ENST00000635562 TSLPQ969D9 159 aa2.07□□□□□ -2.08
PSPC1-208ENST00000635562 MAL2Q969L2 176 aa2.07□□□□□ -2.08
PSPC1-208ENST00000635562 RBMXL1Q96E39 390 aaKnown RBP2.07□□□□□ -2.08
PSPC1-208ENST00000635562 PRELID3AQ96N28 172 aa2.07□□□□□ -2.08
PSPC1-208ENST00000635562 YPEL2Q96QA6 119 aa2.07□□□□□ -2.08
PSPC1-208ENST00000635562 PKMYT1Q99640 499 aa2.07□□□□□ -2.08
PSPC1-208ENST00000635562 CHCHD5Q9BSY4 110 aa2.07□□□□□ -2.08
PSPC1-208ENST00000635562 SLC35B3Q9H1N7 401 aa2.07□□□□□ -2.08
PSPC1-208ENST00000635562 BCL2L10Q9HD36 194 aa2.07□□□□□ -2.08
PSPC1-208ENST00000635562 SLC39A9Q9NUM3 307 aa2.07□□□□□ -2.08
PSPC1-208ENST00000635562 TXNL4BQ9NX01 149 aaKnown RBP2.07□□□□□ -2.08
PSPC1-208ENST00000635562 IL36BQ9NZH7 164 aa2.07□□□□□ -2.08
PSPC1-208ENST00000635562 ZNF835Q9Y2P0 537 aa2.07□□□□□ -2.08
PSPC1-208ENST00000635562 LSM2Q9Y333 95 aaKnown RBP2.07□□□□□ -2.08
PSPC1-208ENST00000635562 TPRKBQ9Y3C4 175 aa2.07□□□□□ -2.08
PSPC1-208ENST00000635562 ARHGEF28Q8N1W1 1705 aaKnown RBP2.07□□□□□ -2.08
PSPC1-208ENST00000635562 PATJQ8NI35 1801 aa2.07□□□□□ -2.08
PSPC1-208ENST00000635562 DOCK2Q92608 1830 aa2.07□□□□□ -2.08
PSPC1-208ENST00000635562 PLIN4Q96Q06 1357 aa2.07□□□□□ -2.08
PSPC1-208ENST00000635562 CCDC88CQ9P219 2028 aa2.07□□□□□ -2.08
PSPC1-208ENST00000635562 ARHGEF12Q9NZN5 1544 aa2.07□□□□□ -2.08
PSPC1-208ENST00000635562 TIAM1Q13009 1591 aa2.06□□□□□ -2.08
PSPC1-208ENST00000635562 AHDC1Q5TGY3 1603 aaPredicted RBP2.06□□□□□ -2.08
PSPC1-208ENST00000635562 ITSN2Q9NZM3 1697 aa2.06□□□□□ -2.08
PSPC1-208ENST00000635562 SHANK3Q9BYB0 1731 aa2.06□□□□□ -2.08
PSPC1-208ENST00000635562 RGPD2P0DJD1 1756 aa2.06□□□□□ -2.08
PSPC1-208ENST00000635562 ARFGEF2Q9Y6D5 1785 aa2.06□□□□□ -2.08
PSPC1-208ENST00000635562 IGLV8-61A0A075B6I0 122 aa2.06□□□□□ -2.08
PSPC1-208ENST00000635562 IGHV3-72A0A0B4J1Y9 119 aa2.06□□□□□ -2.08
PSPC1-208ENST00000635562 IGHV3-35A0A0C4DH35 117 aa2.06□□□□□ -2.08
PSPC1-208ENST00000635562 MUC21A0A0G2JKD1 596 aa2.06□□□□□ -2.08
PSPC1-208ENST00000635562 C7orf66A4D0T2 115 aa2.06□□□□□ -2.08
PSPC1-208ENST00000635562 F8W1H4 67 aa2.06□□□□□ -2.08
PSPC1-208ENST00000635562 K7ERJ3 54 aa2.06□□□□□ -2.08
PSPC1-208ENST00000635562 UBL3O95164 117 aa2.06□□□□□ -2.08
PSPC1-208ENST00000635562 GABARAPO95166 117 aa2.06□□□□□ -2.08
PSPC1-208ENST00000635562 TRACP01848 142 aa2.06□□□□□ -2.08
PSPC1-208ENST00000635562 GYPBP06028 91 aa2.06□□□□□ -2.08
PSPC1-208ENST00000635562 SLC25A6P12236 298 aa2.06□□□□□ -2.08
PSPC1-208ENST00000635562 ZNF32P17041 273 aa2.06□□□□□ -2.08
PSPC1-208ENST00000635562 ELK1P19419 428 aa2.06□□□□□ -2.08
PSPC1-208ENST00000635562 HLA-DMBP28068 263 aa2.06□□□□□ -2.08
PSPC1-208ENST00000635562 BSPH1Q075Z2 132 aa2.06□□□□□ -2.08
PSPC1-208ENST00000635562 LPAL2Q16609 132 aa2.06□□□□□ -2.08
PSPC1-208ENST00000635562 ZNF678Q5SXM1 525 aa2.06□□□□□ -2.08
PSPC1-208ENST00000635562 LCE3CQ5T5A8 94 aa2.06□□□□□ -2.08
PSPC1-208ENST00000635562 GUSBP11Q6P575 273 aa2.06□□□□□ -2.08
PSPC1-208ENST00000635562 LYPD2Q6UXB3 125 aa2.06□□□□□ -2.08
PSPC1-208ENST00000635562 C2orf66Q6UXQ4 117 aa2.06□□□□□ -2.08
PSPC1-208ENST00000635562 C7orf65Q6ZTY9 151 aa2.06□□□□□ -2.08
PSPC1-208ENST00000635562 ZNF101Q8IZC7 436 aa2.06□□□□□ -2.08
PSPC1-208ENST00000635562 CD177Q8N6Q3 437 aa2.06□□□□□ -2.08
PSPC1-208ENST00000635562 Q8N7P7 452 aa2.06□□□□□ -2.08
PSPC1-208ENST00000635562 NPBQ8NG41 125 aa2.06□□□□□ -2.08
PSPC1-208ENST00000635562 C7orf33Q8WU49 177 aa2.06□□□□□ -2.08
PSPC1-208ENST00000635562 DIRC1Q969H9 104 aa2.06□□□□□ -2.08
PSPC1-208ENST00000635562 RMI2Q96E14 147 aa2.06□□□□□ -2.08
PSPC1-208ENST00000635562 SMIM14Q96QK8 99 aa2.06□□□□□ -2.08
PSPC1-208ENST00000635562 B9D2Q9BPU9 175 aa2.06□□□□□ -2.08
PSPC1-208ENST00000635562 COL1A2P08123 1366 aa2.06□□□□□ -2.08
PSPC1-208ENST00000635562 ABCC5O15440 1437 aa2.06□□□□□ -2.08
PSPC1-208ENST00000635562 NRXN1Q9ULB1 1477 aa2.06□□□□□ -2.08
PSPC1-208ENST00000635562 CROCC2H7BZ55 1655 aa2.06□□□□□ -2.08
PSPC1-208ENST00000635562 RGPD1P0DJD0 1748 aa2.05□□□□□ -2.08
PSPC1-208ENST00000635562 ITSN1Q15811 1721 aa2.05□□□□□ -2.08
PSPC1-208ENST00000635562 RGPD8O14715 1765 aaPredicted RBP2.05□□□□□ -2.08
PSPC1-208ENST00000635562 RGPD5Q99666 1765 aa2.05□□□□□ -2.08
PSPC1-208ENST00000635562 SCN4AP35499 1836 aa2.05□□□□□ -2.08
PSPC1-208ENST00000635562 ARHGAP21Q5T5U3 1957 aa2.05□□□□□ -2.08
PSPC1-208ENST00000635562 IGLV3-10A0A075B6K4 115 aa2.05□□□□□ -2.08
PSPC1-208ENST00000635562 SRRM5B3KS81 715 aa2.05□□□□□ -2.08
PSPC1-208ENST00000635562 OR1I1O60431 355 aa2.05□□□□□ -2.08
PSPC1-208ENST00000635562 CYB5AP00167 134 aa2.05□□□□□ -2.08
PSPC1-208ENST00000635562 IGLV2-23P01705 113 aa2.05□□□□□ -2.08
PSPC1-208ENST00000635562 IGHV3-11P01762 117 aa2.05□□□□□ -2.08
PSPC1-208ENST00000635562 IGHV3-13P01766 116 aa2.05□□□□□ -2.08
PSPC1-208ENST00000635562 HBDP02042 147 aa2.05□□□□□ -2.08
PSPC1-208ENST00000635562 GYPAP02724 150 aa2.05□□□□□ -2.08
PSPC1-208ENST00000635562 COX7CP15954 63 aa2.05□□□□□ -2.08
PSPC1-208ENST00000635562 ASIPP42127 132 aa2.05□□□□□ -2.08
PSPC1-208ENST00000635562 CSN1S1P47710 185 aa2.05□□□□□ -2.08
PSPC1-208ENST00000635562 NPC2P61916 151 aa2.05□□□□□ -2.08
PSPC1-208ENST00000635562 RPL30P62888 115 aaKnown RBP2.05□□□□□ -2.08
PSPC1-208ENST00000635562 MRPS36P82909 103 aaKnown RBP2.05□□□□□ -2.08
PSPC1-208ENST00000635562 TIFABQ6ZNK6 161 aa2.05□□□□□ -2.08
PSPC1-208ENST00000635562 SLC25A26Q70HW3 274 aa2.05□□□□□ -2.08
PSPC1-208ENST00000635562 FP248Q71RG6 208 aaPredicted RBP2.05□□□□□ -2.08
PSPC1-208ENST00000635562 PDPNQ86YL7 162 aa2.05□□□□□ -2.08
PSPC1-208ENST00000635562 ORMDL3Q8N138 153 aa2.05□□□□□ -2.08
PSPC1-208ENST00000635562 OR10G2Q8NGC3 310 aa2.05□□□□□ -2.08
PSPC1-208ENST00000635562 RHOXF1Q8NHV9 184 aa2.05□□□□□ -2.08
PSPC1-208ENST00000635562 CHAC1Q9BUX1 264 aa2.05□□□□□ -2.08
PSPC1-208ENST00000635562 KRTAP4-3Q9BYR4 195 aa2.05□□□□□ -2.08
PSPC1-208ENST00000635562 DHRS4-AS1Q9P1J3 65 aa2.05□□□□□ -2.08
PSPC1-208ENST00000635562 OR5V1Q9UGF6 321 aa2.05□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms