RNA–Protein interactions for RNA: ENST00000629667.2

PDLIM3-213, Transcript of PDZ and LIM domain 3, humanhuman

TSL 5 BASIC

Gene PDLIM3, Length 1,016 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-213ENST00000629667 DMBT1Q9UGM3 2413 aaPredicted RBP10.79□□□□□ -0.68
PDLIM3-213ENST00000629667 H3BNG1 76 aa10.79□□□□□ -0.68
PDLIM3-213ENST00000629667 SYNGR2O43760 224 aa10.79□□□□□ -0.68
PDLIM3-213ENST00000629667 HYPMO75409 117 aa10.79□□□□□ -0.68
PDLIM3-213ENST00000629667 OR5G3P0C626 314 aa10.79□□□□□ -0.68
PDLIM3-213ENST00000629667 SLC25A6P12236 298 aa10.79□□□□□ -0.68
PDLIM3-213ENST00000629667 LINC00315P59091 139 aa10.79□□□□□ -0.68
PDLIM3-213ENST00000629667 SPANXN5Q5MJ07 72 aa10.79□□□□□ -0.68
PDLIM3-213ENST00000629667 CYP2G1PQ6ZSU1 146 aa10.79□□□□□ -0.68
PDLIM3-213ENST00000629667 ACOT7LQ6ZUV0 252 aa10.79□□□□□ -0.68
PDLIM3-213ENST00000629667 LINC00612Q8N6U2 182 aa10.79□□□□□ -0.68
PDLIM3-213ENST00000629667 RPUSD4Q96CM3 377 aaKnown RBP10.79□□□□□ -0.68
PDLIM3-213ENST00000629667 C20orf144Q9BQM9 153 aa10.79□□□□□ -0.68
PDLIM3-213ENST00000629667 PGPEP1Q9NXJ5 209 aa10.79□□□□□ -0.68
PDLIM3-213ENST00000629667 RABL2AQ9UBK7 228 aaPredicted RBP10.79□□□□□ -0.68
PDLIM3-213ENST00000629667 RABL2BQ9UNT1 228 aa10.79□□□□□ -0.68
PDLIM3-213ENST00000629667 A0A087X0K7 114 aa10.78□□□□□ -0.68
PDLIM3-213ENST00000629667 SMCO3A2RU48 225 aa10.78□□□□□ -0.68
PDLIM3-213ENST00000629667 SNURFLB1AK76 121 aa10.78□□□□□ -0.68
PDLIM3-213ENST00000629667 EREGO14944 169 aa10.78□□□□□ -0.68
PDLIM3-213ENST00000629667 TMED4Q7Z7H5 227 aa10.78□□□□□ -0.68
PDLIM3-213ENST00000629667 S100A7AQ86SG5 101 aa10.78□□□□□ -0.68
PDLIM3-213ENST00000629667 LYPD1Q8N2G4 141 aa10.78□□□□□ -0.68
PDLIM3-213ENST00000629667 H3BP45 60 aa10.77□□□□□ -0.69
PDLIM3-213ENST00000629667 LINC00869P0C866 280 aa10.77□□□□□ -0.69
PDLIM3-213ENST00000629667 TMEM128Q5BJH2 165 aa10.77□□□□□ -0.69
PDLIM3-213ENST00000629667 FRZBQ92765 325 aa10.77□□□□□ -0.69
PDLIM3-213ENST00000629667 STRAPQ9Y3F4 350 aaKnown RBP10.77□□□□□ -0.69
PDLIM3-213ENST00000629667 FAT1Q14517 4588 aa10.77□□□□□ -0.69
PDLIM3-213ENST00000629667 ANXA7P20073 488 aaKnown RBP10.76□□□□□ -0.69
PDLIM3-213ENST00000629667 VAMP1P23763 118 aa10.76□□□□□ -0.69
PDLIM3-213ENST00000629667 FUSP35637 526 aaKnown RBP eCLIP10.76□□□□□ -0.69
PDLIM3-213ENST00000629667 KIR3DS1Q14943 382 aa10.76□□□□□ -0.69
PDLIM3-213ENST00000629667 Q5VSD8 79 aa10.76□□□□□ -0.69
PDLIM3-213ENST00000629667 Q6ZRN7 208 aaPredicted RBP10.76□□□□□ -0.69
PDLIM3-213ENST00000629667 LRTM2Q8N967 370 aa10.76□□□□□ -0.69
PDLIM3-213ENST00000629667 PMS2P5A8MQ11 134 aa10.75□□□□□ -0.69
PDLIM3-213ENST00000629667 XGP55808 180 aa10.75□□□□□ -0.69
PDLIM3-213ENST00000629667 PLP1P60201 277 aa10.75□□□□□ -0.69
PDLIM3-213ENST00000629667 ERVFC1-1P60608 527 aa10.75□□□□□ -0.69
PDLIM3-213ENST00000629667 SELENOTP62341 195 aa10.75□□□□□ -0.69
PDLIM3-213ENST00000629667 GFI1BQ5VTD9 330 aa10.75□□□□□ -0.69
PDLIM3-213ENST00000629667 CDPF1Q6NVV7 123 aa10.75□□□□□ -0.69
PDLIM3-213ENST00000629667 CCDC190Q86UF4 302 aa10.75□□□□□ -0.69
PDLIM3-213ENST00000629667 PARD6GQ9BYG4 376 aaPredicted RBP10.75□□□□□ -0.69
PDLIM3-213ENST00000629667 TMPRSS5Q9H3S3 457 aa10.75□□□□□ -0.69
PDLIM3-213ENST00000629667 RSL24D1Q9UHA3 163 aaKnown RBP10.75□□□□□ -0.69
PDLIM3-213ENST00000629667 RNF24Q9Y225 148 aa10.75□□□□□ -0.69
PDLIM3-213ENST00000629667 A0A096LPF7 62 aa10.74□□□□□ -0.69
PDLIM3-213ENST00000629667 SIVA1O15304 175 aa10.74□□□□□ -0.69
PDLIM3-213ENST00000629667 LCN15Q6UWW0 184 aa10.74□□□□□ -0.69
PDLIM3-213ENST00000629667 ARL6Q9H0F7 186 aa10.74□□□□□ -0.69
PDLIM3-213ENST00000629667 ZNF331Q9NQX6 463 aaPredicted RBP10.74□□□□□ -0.69
PDLIM3-213ENST00000629667 J3KRW8 73 aa10.73□□□□□ -0.69
PDLIM3-213ENST00000629667 HOXB5P09067 269 aa10.73□□□□□ -0.69
PDLIM3-213ENST00000629667 CXCL2P19875 107 aa10.73□□□□□ -0.69
PDLIM3-213ENST00000629667 FAUP35544 74 aaKnown RBP10.73□□□□□ -0.69
PDLIM3-213ENST00000629667 SLC50A1Q9BRV3 221 aa10.73□□□□□ -0.69
PDLIM3-213ENST00000629667 ARV1Q9H2C2 271 aa10.73□□□□□ -0.69
PDLIM3-213ENST00000629667 MRPS12O15235 138 aaKnown RBP10.72□□□□□ -0.69
PDLIM3-213ENST00000629667 IFNA5P01569 189 aa10.72□□□□□ -0.69
PDLIM3-213ENST00000629667 SNRPCP09234 159 aaKnown RBP10.72□□□□□ -0.69
PDLIM3-213ENST00000629667 DAZ2Q13117 558 aaKnown RBP10.72□□□□□ -0.69
PDLIM3-213ENST00000629667 SPCS2Q15005 226 aa10.72□□□□□ -0.69
PDLIM3-213ENST00000629667 Q6ZTI0 123 aa10.72□□□□□ -0.69
PDLIM3-213ENST00000629667 VSIG2Q96IQ7 327 aa10.72□□□□□ -0.69
PDLIM3-213ENST00000629667 TRGV2A0A075B6R0 118 aa10.71□□□□□ -0.69
PDLIM3-213ENST00000629667 TRAV12-3A0A0B4J271 114 aa10.71□□□□□ -0.69
PDLIM3-213ENST00000629667 SFT2D2O95562 160 aa10.71□□□□□ -0.69
PDLIM3-213ENST00000629667 RRAS2P62070 204 aaPredicted RBP10.71□□□□□ -0.69
PDLIM3-213ENST00000629667 PATE2Q6UY27 113 aa10.71□□□□□ -0.69
PDLIM3-213ENST00000629667 PYGO2Q9BRQ0 406 aa10.71□□□□□ -0.69
PDLIM3-213ENST00000629667 NPVFQ9HCQ7 196 aa10.71□□□□□ -0.69
PDLIM3-213ENST00000629667 PSENENQ9NZ42 101 aa10.71□□□□□ -0.69
PDLIM3-213ENST00000629667 PRAC2D3DTV9 90 aa10.7□□□□□ -0.7
PDLIM3-213ENST00000629667 POLR2GP62487 172 aaKnown RBP eCLIP10.7□□□□□ -0.7
PDLIM3-213ENST00000629667 PPP1R1AQ13522 171 aa10.7□□□□□ -0.7
PDLIM3-213ENST00000629667 LINC00305Q7Z4B0 112 aa10.7□□□□□ -0.7
PDLIM3-213ENST00000629667 NFE4Q86UQ8 179 aa10.7□□□□□ -0.7
PDLIM3-213ENST00000629667 BPIFA4PQ86YQ2 179 aa10.7□□□□□ -0.7
PDLIM3-213ENST00000629667 TNFRSF18Q9Y5U5 241 aa10.7□□□□□ -0.7
PDLIM3-213ENST00000629667 MYCBP2O75592 4640 aa10.69□□□□□ -0.7
PDLIM3-213ENST00000629667 FABP12A6NFH5 140 aa10.69□□□□□ -0.7
PDLIM3-213ENST00000629667 NXPH4O95158 308 aa10.69□□□□□ -0.7
PDLIM3-213ENST00000629667 SMIM18P0DKX4 95 aa10.69□□□□□ -0.7
PDLIM3-213ENST00000629667 LEPP41159 167 aa10.69□□□□□ -0.7
PDLIM3-213ENST00000629667 ID3Q02535 119 aa10.69□□□□□ -0.7
PDLIM3-213ENST00000629667 SLC38A11Q08AI6 406 aa10.69□□□□□ -0.7
PDLIM3-213ENST00000629667 PXDC1Q5TGL8 231 aa10.69□□□□□ -0.7
PDLIM3-213ENST00000629667 TEPPQ6URK8 271 aa10.69□□□□□ -0.7
PDLIM3-213ENST00000629667 SLC25A21Q9BQT8 299 aaPredicted RBP10.69□□□□□ -0.7
PDLIM3-213ENST00000629667 H3BTX0 84 aa10.68□□□□□ -0.7
PDLIM3-213ENST00000629667 K7EPK0 472 aa10.68□□□□□ -0.7
PDLIM3-213ENST00000629667 SLC17A3O00476 420 aa10.68□□□□□ -0.7
PDLIM3-213ENST00000629667 GOSR2O14653 212 aa10.68□□□□□ -0.7
PDLIM3-213ENST00000629667 SSSCA1O60232 199 aa10.68□□□□□ -0.7
PDLIM3-213ENST00000629667 SMR3BP02814 79 aaPredicted RBP10.68□□□□□ -0.7
PDLIM3-213ENST00000629667 AP3S2P59780 193 aa10.68□□□□□ -0.7
PDLIM3-213ENST00000629667 KRTAP10-1P60331 282 aa10.68□□□□□ -0.7
PDLIM3-213ENST00000629667 ICAM4Q14773 271 aa10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms