RNA–Protein interactions for RNA: ENST00000627587.2

PDLIM5-223, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2

Gene PDLIM5, Length 1,853 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-223ENST00000627587 METTL26Q96S19 204 aa7.28□□□□□ -1.24
PDLIM5-223ENST00000627587 C20orf24Q9BUV8 137 aa7.28□□□□□ -1.24
PDLIM5-223ENST00000627587 PRKDCP78527 4128 aaKnown RBP7.28□□□□□ -1.24
PDLIM5-223ENST00000627587 WNK1Q9H4A3 2382 aa7.28□□□□□ -1.24
PDLIM5-223ENST00000627587 TRBV20OR9-2A0A075B6H5 130 aa7.28□□□□□ -1.24
PDLIM5-223ENST00000627587 NDUFA4O00483 81 aa7.28□□□□□ -1.24
PDLIM5-223ENST00000627587 GGCTO75223 188 aaKnown RBP7.28□□□□□ -1.24
PDLIM5-223ENST00000627587 RANP62826 216 aaKnown RBP7.28□□□□□ -1.24
PDLIM5-223ENST00000627587 RHEBQ15382 184 aa7.28□□□□□ -1.24
PDLIM5-223ENST00000627587 TMEM241Q24JQ0 296 aa7.28□□□□□ -1.24
PDLIM5-223ENST00000627587 OR8I2Q8N0Y5 310 aa7.28□□□□□ -1.24
PDLIM5-223ENST00000627587 C17orf77Q96MU5 243 aa7.28□□□□□ -1.24
PDLIM5-223ENST00000627587 ZNF586Q9NXT0 402 aa7.28□□□□□ -1.24
PDLIM5-223ENST00000627587 PEF1Q9UBV8 284 aaKnown RBP7.28□□□□□ -1.24
PDLIM5-223ENST00000627587 NAT8Q9UHE5 227 aa7.28□□□□□ -1.24
PDLIM5-223ENST00000627587 TMEM238LA0A1B0GVL6 79 aa7.27□□□□□ -1.25
PDLIM5-223ENST00000627587 RPLP1P05386 114 aaKnown RBP7.27□□□□□ -1.25
PDLIM5-223ENST00000627587 IGLC2P0DOY2 106 aa7.27□□□□□ -1.25
PDLIM5-223ENST00000627587 LORP23490 312 aaPredicted RBP7.27□□□□□ -1.25
PDLIM5-223ENST00000627587 CRYBB3P26998 211 aa7.27□□□□□ -1.25
PDLIM5-223ENST00000627587 BTN1A1Q13410 526 aa7.27□□□□□ -1.25
PDLIM5-223ENST00000627587 RNF152Q8N8N0 203 aa7.27□□□□□ -1.25
PDLIM5-223ENST00000627587 OR5B12Q96R08 314 aa7.27□□□□□ -1.25
PDLIM5-223ENST00000627587 TCEAL7Q9BRU2 100 aa7.27□□□□□ -1.25
PDLIM5-223ENST00000627587 ELOVL1Q9BW60 279 aa7.27□□□□□ -1.25
PDLIM5-223ENST00000627587 SDF2L1Q9HCN8 221 aa7.27□□□□□ -1.25
PDLIM5-223ENST00000627587 RPS10P5Q9NQ39 176 aa7.27□□□□□ -1.25
PDLIM5-223ENST00000627587 C7orf77A4D0Y5 90 aa7.26□□□□□ -1.25
PDLIM5-223ENST00000627587 H3BTX0 84 aa7.26□□□□□ -1.25
PDLIM5-223ENST00000627587 DNASE2O00115 360 aaPredicted RBP7.26□□□□□ -1.25
PDLIM5-223ENST00000627587 BUB3O43684 328 aa7.26□□□□□ -1.25
PDLIM5-223ENST00000627587 APOHP02749 345 aaPredicted RBP7.26□□□□□ -1.25
PDLIM5-223ENST00000627587 KPRPQ5T749 579 aaPredicted RBP7.26□□□□□ -1.25
PDLIM5-223ENST00000627587 UNQ9165/PRO28630Q6UXU0 137 aa7.26□□□□□ -1.25
PDLIM5-223ENST00000627587 KLHDC1Q8N7A1 406 aa7.26□□□□□ -1.25
PDLIM5-223ENST00000627587 WIPF2Q8TF74 440 aaPredicted RBP7.26□□□□□ -1.25
PDLIM5-223ENST00000627587 UBE2E2Q96LR5 201 aa7.26□□□□□ -1.25
PDLIM5-223ENST00000627587 GPR82Q96P67 336 aa7.26□□□□□ -1.25
PDLIM5-223ENST00000627587 Q9H3A6 140 aa7.26□□□□□ -1.25
PDLIM5-223ENST00000627587 TRBV19A0A075B6N1 114 aa7.26□□□□□ -1.25
PDLIM5-223ENST00000627587 LOC100996750A0A140TA64 210 aa7.26□□□□□ -1.25
PDLIM5-223ENST00000627587 PGPA6NDG6 321 aa7.26□□□□□ -1.25
PDLIM5-223ENST00000627587 SLC25A5P05141 298 aaKnown RBP7.26□□□□□ -1.25
PDLIM5-223ENST00000627587 AKR1C3P42330 323 aa7.26□□□□□ -1.25
PDLIM5-223ENST00000627587 PDE6HQ13956 83 aa7.26□□□□□ -1.25
PDLIM5-223ENST00000627587 ADIRFQ15847 76 aa7.26□□□□□ -1.25
PDLIM5-223ENST00000627587 BEAN1Q3B7T3 259 aa7.26□□□□□ -1.25
PDLIM5-223ENST00000627587 TCTEX1D4Q5JR98 221 aa7.26□□□□□ -1.25
PDLIM5-223ENST00000627587 C1orf194Q5T5A4 169 aa7.26□□□□□ -1.25
PDLIM5-223ENST00000627587 C2CD4CQ8TF44 421 aa7.26□□□□□ -1.25
PDLIM5-223ENST00000627587 TMEM190Q8WZ59 177 aa7.26□□□□□ -1.25
PDLIM5-223ENST00000627587 HIST1H2BAQ96A08 127 aa7.26□□□□□ -1.25
PDLIM5-223ENST00000627587 KRTAP4-6Q9BYQ5 205 aa7.26□□□□□ -1.25
PDLIM5-223ENST00000627587 SMAD5-AS1Q9Y6J3 95 aa7.26□□□□□ -1.25
PDLIM5-223ENST00000627587 U3KQE9 123 aa7.26□□□□□ -1.25
PDLIM5-223ENST00000627587 HELTA6NFD8 242 aa7.25□□□□□ -1.25
PDLIM5-223ENST00000627587 B4DEV8 164 aa7.25□□□□□ -1.25
PDLIM5-223ENST00000627587 SLC17A3O00476 420 aa7.25□□□□□ -1.25
PDLIM5-223ENST00000627587 ZNF207O43670 478 aaKnown RBP7.25□□□□□ -1.25
PDLIM5-223ENST00000627587 LGALS1P09382 135 aaKnown RBP7.25□□□□□ -1.25
PDLIM5-223ENST00000627587 ATF4P18848 351 aaPredicted RBP7.25□□□□□ -1.25
PDLIM5-223ENST00000627587 RPL35P42766 123 aaKnown RBP7.25□□□□□ -1.25
PDLIM5-223ENST00000627587 GALR1P47211 349 aa7.25□□□□□ -1.25
PDLIM5-223ENST00000627587 FAM106AQ4KMX7 169 aa7.25□□□□□ -1.25
PDLIM5-223ENST00000627587 C1QL4Q86Z23 238 aa7.25□□□□□ -1.25
PDLIM5-223ENST00000627587 CBLN2Q8IUK8 224 aa7.25□□□□□ -1.25
PDLIM5-223ENST00000627587 LYPD1Q8N2G4 141 aa7.25□□□□□ -1.25
PDLIM5-223ENST00000627587 C5orf17Q8NAS9 161 aa7.25□□□□□ -1.25
PDLIM5-223ENST00000627587 OTORQ9NRC9 128 aa7.25□□□□□ -1.25
PDLIM5-223ENST00000627587 ZNF320A2RRD8 509 aa7.24□□□□□ -1.25
PDLIM5-223ENST00000627587 PGPEP1LA6NFU8 196 aa7.24□□□□□ -1.25
PDLIM5-223ENST00000627587 PEX7O00628 323 aa7.24□□□□□ -1.25
PDLIM5-223ENST00000627587 CNN1P51911 297 aaKnown RBP7.24□□□□□ -1.25
PDLIM5-223ENST00000627587 RPL23P62829 140 aaKnown RBP7.24□□□□□ -1.25
PDLIM5-223ENST00000627587 RPEL1Q2QD12 228 aa7.24□□□□□ -1.25
PDLIM5-223ENST00000627587 TMEM88Q6PEY1 159 aa7.24□□□□□ -1.25
PDLIM5-223ENST00000627587 SREK1IP1Q8N9Q2 155 aaPredicted RBP7.24□□□□□ -1.25
PDLIM5-223ENST00000627587 CMTM2Q8TAZ6 248 aa7.24□□□□□ -1.25
PDLIM5-223ENST00000627587 AAMDCQ9H7C9 122 aa7.24□□□□□ -1.25
PDLIM5-223ENST00000627587 EPDR1Q9UM22 224 aa7.24□□□□□ -1.25
PDLIM5-223ENST00000627587 IGHV3OR16-13A0A075B7E8 117 aa7.24□□□□□ -1.25
PDLIM5-223ENST00000627587 A0A087WWC5 75 aa7.24□□□□□ -1.25
PDLIM5-223ENST00000627587 IGHV3-74A0A0B4J1X5 117 aa7.24□□□□□ -1.25
PDLIM5-223ENST00000627587 IGHV3-66A0A0C4DH42 116 aa7.24□□□□□ -1.25
PDLIM5-223ENST00000627587 A0A1W2PS18 150 aa7.24□□□□□ -1.25
PDLIM5-223ENST00000627587 C9JCJ5 164 aa7.24□□□□□ -1.25
PDLIM5-223ENST00000627587 PSG9Q00887 426 aa7.24□□□□□ -1.25
PDLIM5-223ENST00000627587 SAMD5Q5TGI4 173 aa7.24□□□□□ -1.25
PDLIM5-223ENST00000627587 HIST2H2BDQ6DRA6 164 aa7.24□□□□□ -1.25
PDLIM5-223ENST00000627587 SIGLEC15Q6ZMC9 328 aa7.24□□□□□ -1.25
PDLIM5-223ENST00000627587 C18orf65Q6ZTR6 163 aa7.24□□□□□ -1.25
PDLIM5-223ENST00000627587 GPHB5Q86YW7 130 aa7.24□□□□□ -1.25
PDLIM5-223ENST00000627587 EXOC3-AS1Q8N2X6 119 aa7.24□□□□□ -1.25
PDLIM5-223ENST00000627587 LINC00479Q96M42 142 aa7.24□□□□□ -1.25
PDLIM5-223ENST00000627587 ATG101Q9BSB4 218 aa7.24□□□□□ -1.25
PDLIM5-223ENST00000627587 SMCO4Q9NRQ5 59 aa7.24□□□□□ -1.25
PDLIM5-223ENST00000627587 IGHV3-49A0A0A0MS15 119 aa7.23□□□□□ -1.25
PDLIM5-223ENST00000627587 ZNF785A8K8V0 405 aa7.23□□□□□ -1.25
PDLIM5-223ENST00000627587 EDN2P20800 178 aa7.23□□□□□ -1.25
PDLIM5-223ENST00000627587 CDX1P47902 265 aaPredicted RBP7.23□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms