RNA–Protein interactions for RNA: ENST00000623364.3

CDKL5-204, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 3

Gene CDKL5, Length 483 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-204ENST00000623364 IGLV10-54A0A075B6I4 117 aa3.6□□□□□ -1.83
CDKL5-204ENST00000623364 A0A087WWC5 75 aa3.6□□□□□ -1.83
CDKL5-204ENST00000623364 M0R129 80 aa3.6□□□□□ -1.83
CDKL5-204ENST00000623364 ATP5HO75947 161 aa3.6□□□□□ -1.83
CDKL5-204ENST00000623364 SLPIP03973 132 aa3.6□□□□□ -1.83
CDKL5-204ENST00000623364 TSPAN5P62079 268 aa3.6□□□□□ -1.83
CDKL5-204ENST00000623364 GNGT1P63211 74 aa3.6□□□□□ -1.83
CDKL5-204ENST00000623364 CATR1Q13166 79 aa3.6□□□□□ -1.83
CDKL5-204ENST00000623364 FLOT2Q14254 428 aa3.6□□□□□ -1.83
CDKL5-204ENST00000623364 RAB11BQ15907 218 aa3.6□□□□□ -1.83
CDKL5-204ENST00000623364 FAM219AQ8IW50 185 aa3.6□□□□□ -1.83
CDKL5-204ENST00000623364 RAB3CQ96E17 227 aa3.6□□□□□ -1.83
CDKL5-204ENST00000623364 MYCBPQ99417 103 aaPredicted RBP3.6□□□□□ -1.83
CDKL5-204ENST00000623364 KIR2DL4Q99706 377 aa3.6□□□□□ -1.83
CDKL5-204ENST00000623364 HOPXQ9BPY8 73 aaPredicted RBP3.6□□□□□ -1.83
CDKL5-204ENST00000623364 PARD6GQ9BYG4 376 aaPredicted RBP3.6□□□□□ -1.83
CDKL5-204ENST00000623364 IGLV8-61A0A075B6I0 122 aa3.59□□□□□ -1.83
CDKL5-204ENST00000623364 A0A096LNI7 61 aa3.59□□□□□ -1.83
CDKL5-204ENST00000623364 TRAV8-2A0A0B4J237 113 aa3.59□□□□□ -1.83
CDKL5-204ENST00000623364 TRAV4A0A0B4J268 109 aa3.59□□□□□ -1.83
CDKL5-204ENST00000623364 IGKV1D-13A0A0B4J2D9 117 aa3.59□□□□□ -1.83
CDKL5-204ENST00000623364 TSHBP01222 138 aa3.59□□□□□ -1.83
CDKL5-204ENST00000623364 IGKV1-13P0DP09 117 aa3.59□□□□□ -1.83
CDKL5-204ENST00000623364 PSG1P11464 419 aa3.59□□□□□ -1.83
CDKL5-204ENST00000623364 CBX5P45973 191 aa3.59□□□□□ -1.83
CDKL5-204ENST00000623364 RPL5P46777 297 aaKnown RBP3.59□□□□□ -1.83
CDKL5-204ENST00000623364 RND2P52198 227 aa3.59□□□□□ -1.83
CDKL5-204ENST00000623364 EIF5AP63241 154 aaKnown RBP3.59□□□□□ -1.83
CDKL5-204ENST00000623364 MRPL28Q13084 256 aaKnown RBP3.59□□□□□ -1.83
CDKL5-204ENST00000623364 MEDAGQ5VYS4 303 aa3.59□□□□□ -1.83
CDKL5-204ENST00000623364 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa3.59□□□□□ -1.83
CDKL5-204ENST00000623364 FP248Q71RG6 208 aaPredicted RBP3.59□□□□□ -1.83
CDKL5-204ENST00000623364 OR4C5Q8NGB2 326 aa3.59□□□□□ -1.83
CDKL5-204ENST00000623364 OR4A16Q8NH70 328 aa3.59□□□□□ -1.83
CDKL5-204ENST00000623364 MARCH1Q8TCQ1 289 aa3.59□□□□□ -1.83
CDKL5-204ENST00000623364 TSC22D3Q99576 134 aa3.59□□□□□ -1.83
CDKL5-204ENST00000623364 CHCHD7Q9BUK0 85 aa3.59□□□□□ -1.83
CDKL5-204ENST00000623364 TMEM56-RWDD3S4R434 201 aa3.59□□□□□ -1.83
CDKL5-204ENST00000623364 TRAV8-7A0A075B6U6 113 aa3.58□□□□□ -1.84
CDKL5-204ENST00000623364 IGHV3-16A0A0C4DH30 117 aa3.58□□□□□ -1.84
CDKL5-204ENST00000623364 CRYM-AS1A6NIL9 109 aa3.58□□□□□ -1.84
CDKL5-204ENST00000623364 KRASP01116 189 aa3.58□□□□□ -1.84
CDKL5-204ENST00000623364 NFYAP23511 347 aaPredicted RBP3.58□□□□□ -1.84
CDKL5-204ENST00000623364 FCGR2CP31995 323 aa3.58□□□□□ -1.84
CDKL5-204ENST00000623364 LEPP41159 167 aa3.58□□□□□ -1.84
CDKL5-204ENST00000623364 SRPXP78539 464 aa3.58□□□□□ -1.84
CDKL5-204ENST00000623364 EFNB1P98172 346 aa3.58□□□□□ -1.84
CDKL5-204ENST00000623364 BTN1A1Q13410 526 aa3.58□□□□□ -1.84
CDKL5-204ENST00000623364 TMED1Q13445 227 aa3.58□□□□□ -1.84
CDKL5-204ENST00000623364 RAB31Q13636 194 aa3.58□□□□□ -1.84
CDKL5-204ENST00000623364 PRR27Q6MZM9 219 aa3.58□□□□□ -1.84
CDKL5-204ENST00000623364 ENHOQ6UWT2 76 aa3.58□□□□□ -1.84
CDKL5-204ENST00000623364 CCDC197Q8NCU1 140 aa3.58□□□□□ -1.84
CDKL5-204ENST00000623364 MAFIPQ8WZ33 124 aa3.58□□□□□ -1.84
CDKL5-204ENST00000623364 SAT2Q96F10 170 aaPredicted RBP3.58□□□□□ -1.84
CDKL5-204ENST00000623364 ARHGAP5-AS1Q96IT6 56 aa3.58□□□□□ -1.84
CDKL5-204ENST00000623364 NSMCE2Q96MF7 247 aa3.58□□□□□ -1.84
CDKL5-204ENST00000623364 C8orf4Q9NR00 106 aa3.58□□□□□ -1.84
CDKL5-204ENST00000623364 CCL28Q9NRJ3 127 aa3.58□□□□□ -1.84
CDKL5-204ENST00000623364 hCG_2014768A0A024R1R8 64 aa3.57□□□□□ -1.84
CDKL5-204ENST00000623364 A0A0A6YYD4 124 aa3.57□□□□□ -1.84
CDKL5-204ENST00000623364 C9orf118A6NHY6 69 aa3.57□□□□□ -1.84
CDKL5-204ENST00000623364 E9PI62 339 aa3.57□□□□□ -1.84
CDKL5-204ENST00000623364 RPS10P46783 165 aaKnown RBP3.57□□□□□ -1.84
CDKL5-204ENST00000623364 RHOHQ15669 191 aa3.57□□□□□ -1.84
CDKL5-204ENST00000623364 ZIK1Q3SY52 487 aaPredicted RBP3.57□□□□□ -1.84
CDKL5-204ENST00000623364 SLC25A29Q8N8R3 303 aa3.57□□□□□ -1.84
CDKL5-204ENST00000623364 NUDT10Q8NFP7 164 aa3.57□□□□□ -1.84
CDKL5-204ENST00000623364 BPIFCQ8NFQ6 507 aa3.57□□□□□ -1.84
CDKL5-204ENST00000623364 ZNF431Q8TF32 576 aaPredicted RBP3.57□□□□□ -1.84
CDKL5-204ENST00000623364 RASL10AQ92737 203 aa3.57□□□□□ -1.84
CDKL5-204ENST00000623364 RFKQ969G6 155 aa3.57□□□□□ -1.84
CDKL5-204ENST00000623364 RPUSD4Q96CM3 377 aaKnown RBP3.57□□□□□ -1.84
CDKL5-204ENST00000623364 NUDT11Q96G61 164 aa3.57□□□□□ -1.84
CDKL5-204ENST00000623364 URM1Q9BTM9 101 aaKnown RBP3.57□□□□□ -1.84
CDKL5-204ENST00000623364 PKIGQ9Y2B9 76 aa3.57□□□□□ -1.84
CDKL5-204ENST00000623364 ZAR1LA6NP61 321 aa3.56□□□□□ -1.84
CDKL5-204ENST00000623364 EDF1O60869 148 aaKnown RBP3.56□□□□□ -1.84
CDKL5-204ENST00000623364 CTXN2P0C2S0 81 aa3.56□□□□□ -1.84
CDKL5-204ENST00000623364 SLC25A4P12235 298 aa3.56□□□□□ -1.84
CDKL5-204ENST00000623364 LGALS3P17931 250 aaKnown RBP3.56□□□□□ -1.84
CDKL5-204ENST00000623364 PSMA1P25786 263 aaKnown RBP3.56□□□□□ -1.84
CDKL5-204ENST00000623364 HLA-DMAP28067 261 aa3.56□□□□□ -1.84
CDKL5-204ENST00000623364 G6PCP35575 357 aa3.56□□□□□ -1.84
CDKL5-204ENST00000623364 ARPC4P59998 168 aa3.56□□□□□ -1.84
CDKL5-204ENST00000623364 CTAG1AP78358 180 aa3.56□□□□□ -1.84
CDKL5-204ENST00000623364 MIAQ16674 131 aa3.56□□□□□ -1.84
CDKL5-204ENST00000623364 PRSS54Q6PEW0 395 aa3.56□□□□□ -1.84
CDKL5-204ENST00000623364 LHFPL3Q86UP9 236 aa3.56□□□□□ -1.84
CDKL5-204ENST00000623364 LGI3Q8N145 548 aa3.56□□□□□ -1.84
CDKL5-204ENST00000623364 ACBD7Q8N6N7 88 aa3.56□□□□□ -1.84
CDKL5-204ENST00000623364 SLC35G3Q8N808 338 aa3.56□□□□□ -1.84
CDKL5-204ENST00000623364 NKAIN3Q8N8D7 197 aa3.56□□□□□ -1.84
CDKL5-204ENST00000623364 LINC00304Q8N9R0 145 aa3.56□□□□□ -1.84
CDKL5-204ENST00000623364 TSPAN14Q8NG11 270 aa3.56□□□□□ -1.84
CDKL5-204ENST00000623364 OR51H1Q8NH63 302 aa3.56□□□□□ -1.84
CDKL5-204ENST00000623364 OPRPNQ99935 248 aaPredicted RBP3.56□□□□□ -1.84
CDKL5-204ENST00000623364 SLC25A22Q9H936 323 aa3.56□□□□□ -1.84
CDKL5-204ENST00000623364 SAR1AQ9NR31 198 aa3.56□□□□□ -1.84
CDKL5-204ENST00000623364 C7orf71A4D174 169 aa3.55□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms