RNA–Protein interactions for RNA: ENST00000620787.4

PDLIM3-212, Transcript of PDZ and LIM domain 3, humanhuman

TSL 4 BASIC

Gene PDLIM3, Length 2,352 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-212ENST00000620787 OR8A1Q8NGG7 326 aa15.44■□□□□ 0.06
PDLIM3-212ENST00000620787 C8orf49Q96NF6 230 aa15.44■□□□□ 0.06
PDLIM3-212ENST00000620787 SIGLEC8Q9NYZ4 499 aa15.44■□□□□ 0.06
PDLIM3-212ENST00000620787 MRPS12O15235 138 aaKnown RBP15.44■□□□□ 0.06
PDLIM3-212ENST00000620787 U3KQK5 164 aa15.44■□□□□ 0.06
PDLIM3-212ENST00000620787 PKDREJQ9NTG1 2253 aa15.44■□□□□ 0.06
PDLIM3-212ENST00000620787 D6R8Y8 96 aa15.43■□□□□ 0.06
PDLIM3-212ENST00000620787 LOC389332A0A1B0GUA5 103 aa15.43■□□□□ 0.06
PDLIM3-212ENST00000620787 K7EIM0 57 aa15.43■□□□□ 0.06
PDLIM3-212ENST00000620787 RNASE6Q93091 150 aaKnown RBP15.43■□□□□ 0.06
PDLIM3-212ENST00000620787 RABAC1Q9UI14 185 aa15.43■□□□□ 0.06
PDLIM3-212ENST00000620787 A0A0G2JNJ9 132 aa15.42■□□□□ 0.06
PDLIM3-212ENST00000620787 BUB1B-PAK6H3BSN5 160 aa15.42■□□□□ 0.06
PDLIM3-212ENST00000620787 K7EM74 188 aa15.42■□□□□ 0.06
PDLIM3-212ENST00000620787 M0R3E3 92 aa15.42■□□□□ 0.06
PDLIM3-212ENST00000620787 LGALS9BQ3B8N2 356 aa15.42■□□□□ 0.06
PDLIM3-212ENST00000620787 LGALS9CQ6DKI2 356 aa15.42■□□□□ 0.06
PDLIM3-212ENST00000620787 ZNF414Q96IQ9 312 aa15.42■□□□□ 0.06
PDLIM3-212ENST00000620787 Q9UFV3 132 aa15.42■□□□□ 0.06
PDLIM3-212ENST00000620787 ZGRF1Q86YA3 2104 aa15.42■□□□□ 0.06
PDLIM3-212ENST00000620787 TMEM213A2RRL7 107 aa15.42■□□□□ 0.06
PDLIM3-212ENST00000620787 UQCRFS1P47985 274 aa15.42■□□□□ 0.06
PDLIM3-212ENST00000620787 LYZL1Q6UWQ5 148 aa15.42■□□□□ 0.06
PDLIM3-212ENST00000620787 ZNF491Q8N8L2 437 aa15.42■□□□□ 0.06
PDLIM3-212ENST00000620787 OR1N2Q8NGR9 330 aa15.42■□□□□ 0.06
PDLIM3-212ENST00000620787 SERTM2A0A1B0GWG4 89 aa15.41■□□□□ 0.06
PDLIM3-212ENST00000620787 ZZEF1O43149 2961 aa15.41■□□□□ 0.06
PDLIM3-212ENST00000620787 PRELID3AQ96N28 172 aa15.41■□□□□ 0.06
PDLIM3-212ENST00000620787 FAM104BQ5XKR9 115 aa15.41■□□□□ 0.06
PDLIM3-212ENST00000620787 UFSP1Q6NVU6 142 aa15.41■□□□□ 0.06
PDLIM3-212ENST00000620787 AMN1Q8IY45 258 aa15.41■□□□□ 0.06
PDLIM3-212ENST00000620787 BOD1L2Q8IYS8 172 aa15.41■□□□□ 0.06
PDLIM3-212ENST00000620787 NHLH1Q02575 133 aa15.4■□□□□ 0.06
PDLIM3-212ENST00000620787 SMIM15Q7Z3B0 74 aa15.4■□□□□ 0.06
PDLIM3-212ENST00000620787 RNF125Q96EQ8 232 aa15.4■□□□□ 0.06
PDLIM3-212ENST00000620787 DMXL2Q8TDJ6 3036 aa15.4■□□□□ 0.06
PDLIM3-212ENST00000620787 PAX8Q06710 450 aa15.4■□□□□ 0.06
PDLIM3-212ENST00000620787 JMJD8Q96S16 334 aa15.4■□□□□ 0.06
PDLIM3-212ENST00000620787 KALRNO60229 2985 aa15.39■□□□□ 0.05
PDLIM3-212ENST00000620787 H3BRM9 83 aa15.39■□□□□ 0.05
PDLIM3-212ENST00000620787 IL4P05112 153 aa15.39■□□□□ 0.05
PDLIM3-212ENST00000620787 CT45A10P0DMU9 189 aa15.39■□□□□ 0.05
PDLIM3-212ENST00000620787 CACNG7P62955 275 aa15.39■□□□□ 0.05
PDLIM3-212ENST00000620787 TMSB15BA0A087X1C1 80 aa15.39■□□□□ 0.05
PDLIM3-212ENST00000620787 GAGE10A6NGK3 116 aa15.39■□□□□ 0.05
PDLIM3-212ENST00000620787 C9orf118A6NHY6 69 aa15.39■□□□□ 0.05
PDLIM3-212ENST00000620787 K7ERU9 68 aa15.39■□□□□ 0.05
PDLIM3-212ENST00000620787 PLGLAQ15195 96 aa15.39■□□□□ 0.05
PDLIM3-212ENST00000620787 ORMDL3Q8N138 153 aa15.39■□□□□ 0.05
PDLIM3-212ENST00000620787 SRSF8Q9BRL6 282 aaKnown RBP15.39■□□□□ 0.05
PDLIM3-212ENST00000620787 DYNLRB1Q9NP97 96 aa15.39■□□□□ 0.05
PDLIM3-212ENST00000620787 DCHS1Q96JQ0 3298 aa15.38■□□□□ 0.05
PDLIM3-212ENST00000620787 SMAD7O15105 426 aaKnown RBP15.38■□□□□ 0.05
PDLIM3-212ENST00000620787 FCGR2BP31994 310 aaPredicted RBP15.38■□□□□ 0.05
PDLIM3-212ENST00000620787 FXYD7P58549 80 aa15.38■□□□□ 0.05
PDLIM3-212ENST00000620787 MRPL51Q4U2R6 128 aaKnown RBP15.38■□□□□ 0.05
PDLIM3-212ENST00000620787 WI2-2373I1.2A0A1W2PRP0 233 aa15.38■□□□□ 0.05
PDLIM3-212ENST00000620787 TMEM189A5PLL7 270 aa15.38■□□□□ 0.05
PDLIM3-212ENST00000620787 SH2D1AO60880 128 aa15.38■□□□□ 0.05
PDLIM3-212ENST00000620787 COX7A1P24310 79 aa15.38■□□□□ 0.05
PDLIM3-212ENST00000620787 BCL6BQ8N143 479 aaPredicted RBP15.38■□□□□ 0.05
PDLIM3-212ENST00000620787 RPEQ96AT9 228 aa15.38■□□□□ 0.05
PDLIM3-212ENST00000620787 RALYQ9UKM9 306 aaKnown RBP15.38■□□□□ 0.05
PDLIM3-212ENST00000620787 CEP250Q9BV73 2442 aa15.37■□□□□ 0.05
PDLIM3-212ENST00000620787 A6NDN8 102 aa15.37■□□□□ 0.05
PDLIM3-212ENST00000620787 HBDP02042 147 aa15.37■□□□□ 0.05
PDLIM3-212ENST00000620787 CNIH1O95406 144 aa15.36■□□□□ 0.05
PDLIM3-212ENST00000620787 THYN1Q9P016 225 aa15.36■□□□□ 0.05
PDLIM3-212ENST00000620787 TCTAP57738 103 aa15.36■□□□□ 0.05
PDLIM3-212ENST00000620787 HSD52Q0P140 79 aa15.36■□□□□ 0.05
PDLIM3-212ENST00000620787 IGF2-ASQ6U949 168 aa15.36■□□□□ 0.05
PDLIM3-212ENST00000620787 ADAMTSL5Q6ZMM2 481 aa15.36■□□□□ 0.05
PDLIM3-212ENST00000620787 OR9G4Q8NGQ1 327 aa15.36■□□□□ 0.05
PDLIM3-212ENST00000620787 A1L4Q6 167 aa15.35■□□□□ 0.05
PDLIM3-212ENST00000620787 SAP30O75446 220 aa15.35■□□□□ 0.05
PDLIM3-212ENST00000620787 PDE6HQ13956 83 aa15.35■□□□□ 0.05
PDLIM3-212ENST00000620787 RNF5Q99942 180 aa15.35■□□□□ 0.05
PDLIM3-212ENST00000620787 HILPDAQ9Y5L2 63 aa15.35■□□□□ 0.05
PDLIM3-212ENST00000620787 SHISA9B4DS77 424 aa15.35■□□□□ 0.05
PDLIM3-212ENST00000620787 E7EQL1 145 aa15.35■□□□□ 0.05
PDLIM3-212ENST00000620787 LY6LH3BQJ8 138 aa15.35■□□□□ 0.05
PDLIM3-212ENST00000620787 KIR3DS1Q14943 382 aa15.35■□□□□ 0.05
PDLIM3-212ENST00000620787 GTF2H5Q6ZYL4 71 aa15.35■□□□□ 0.05
PDLIM3-212ENST00000620787 IFI27L1Q96BM0 104 aa15.35■□□□□ 0.05
PDLIM3-212ENST00000620787 AAMDCQ9H7C9 122 aa15.35■□□□□ 0.05
PDLIM3-212ENST00000620787 LAMA5O15230 3695 aa15.34■□□□□ 0.05
PDLIM3-212ENST00000620787 VSTM5A8MXK1 200 aa15.34■□□□□ 0.05
PDLIM3-212ENST00000620787 H3BUT2 72 aa15.34■□□□□ 0.05
PDLIM3-212ENST00000620787 SIVA1O15304 175 aa15.34■□□□□ 0.05
PDLIM3-212ENST00000620787 CSTL1Q9H114 145 aa15.34■□□□□ 0.05
PDLIM3-212ENST00000620787 S4R3C0 116 aa15.34■□□□□ 0.05
PDLIM3-212ENST00000620787 MGAQ8IWI9 3026 aa15.34■□□□□ 0.05
PDLIM3-212ENST00000620787 SMKR1H3BMG3 65 aa15.34■□□□□ 0.05
PDLIM3-212ENST00000620787 NPYP01303 97 aa15.34■□□□□ 0.05
PDLIM3-212ENST00000620787 FER1L6-AS1Q8NA97 138 aa15.34■□□□□ 0.05
PDLIM3-212ENST00000620787 AP1S3Q96PC3 154 aa15.34■□□□□ 0.05
PDLIM3-212ENST00000620787 MEGF9Q9H1U4 602 aa15.34■□□□□ 0.05
PDLIM3-212ENST00000620787 K7EP34 96 aa15.33■□□□□ 0.04
PDLIM3-212ENST00000620787 COX8CQ7Z4L0 72 aa15.33■□□□□ 0.04
PDLIM3-212ENST00000620787 PCNX1Q96RV3 2341 aa15.33■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 190.8 ms