RNA–Protein interactions for RNA: ENST00000619445.1

UPF3B-204, Transcript of UPF3B, regulator of nonsense mediated mRNA decay, humanhuman

TSL 5 BASIC

Gene UPF3B, Length 1,385 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3B-204ENST00000619445 ARL6Q9H0F7 186 aa8.44□□□□□ -1.06
UPF3B-204ENST00000619445 ARV1Q9H2C2 271 aa8.44□□□□□ -1.06
UPF3B-204ENST00000619445 DNAH17Q9UFH2 4485 aa8.43□□□□□ -1.06
UPF3B-204ENST00000619445 MUC4Q99102 2169 aa8.43□□□□□ -1.06
UPF3B-204ENST00000619445 ATP5G1P05496 136 aa8.43□□□□□ -1.06
UPF3B-204ENST00000619445 METTL15P1P0C7V9 234 aa8.43□□□□□ -1.06
UPF3B-204ENST00000619445 CDKN1BP46527 198 aa8.43□□□□□ -1.06
UPF3B-204ENST00000619445 ATP5G3P48201 142 aa8.43□□□□□ -1.06
UPF3B-204ENST00000619445 HIST1H1AQ02539 215 aaPredicted RBP8.43□□□□□ -1.06
UPF3B-204ENST00000619445 ZNF846Q147U1 533 aa8.43□□□□□ -1.06
UPF3B-204ENST00000619445 C1orf134Q5TEV5 83 aa8.43□□□□□ -1.06
UPF3B-204ENST00000619445 RNF182Q8N6D2 247 aa8.43□□□□□ -1.06
UPF3B-204ENST00000619445 MITD1Q8WV92 249 aa8.43□□□□□ -1.06
UPF3B-204ENST00000619445 LINC01587Q99440 93 aa8.43□□□□□ -1.06
UPF3B-204ENST00000619445 KRTAP17-1Q9BYP8 105 aa8.43□□□□□ -1.06
UPF3B-204ENST00000619445 TIMM8BQ9Y5J9 83 aaPredicted RBP8.43□□□□□ -1.06
UPF3B-204ENST00000619445 NACAE9PAV3 2078 aa8.43□□□□□ -1.06
UPF3B-204ENST00000619445 CBY3A6NI87 242 aa8.42□□□□□ -1.06
UPF3B-204ENST00000619445 ZNF705GA8MUZ8 300 aaPredicted RBP8.42□□□□□ -1.06
UPF3B-204ENST00000619445 H7BYZ3 331 aa8.42□□□□□ -1.06
UPF3B-204ENST00000619445 SCGB1D2O95969 90 aa8.42□□□□□ -1.06
UPF3B-204ENST00000619445 DEFB130BP0DP73 79 aa8.42□□□□□ -1.06
UPF3B-204ENST00000619445 DEFB130AP0DP74 79 aa8.42□□□□□ -1.06
UPF3B-204ENST00000619445 RRAS2P62070 204 aaPredicted RBP8.42□□□□□ -1.06
UPF3B-204ENST00000619445 BAP18Q8IXM2 172 aa8.42□□□□□ -1.06
UPF3B-204ENST00000619445 ZBTB8BQ8NAP8 495 aaPredicted RBP8.42□□□□□ -1.06
UPF3B-204ENST00000619445 OR10J6PQ8NGY7 276 aa8.42□□□□□ -1.06
UPF3B-204ENST00000619445 RPUSD4Q96CM3 377 aaKnown RBP8.42□□□□□ -1.06
UPF3B-204ENST00000619445 UHRF2Q96PU4 802 aa8.42□□□□□ -1.06
UPF3B-204ENST00000619445 RBM38Q9H0Z9 239 aaKnown RBP8.42□□□□□ -1.06
UPF3B-204ENST00000619445 PXMP4Q9Y6I8 212 aa8.42□□□□□ -1.06
UPF3B-204ENST00000619445 FAT2Q9NYQ8 4349 aa8.41□□□□□ -1.06
UPF3B-204ENST00000619445 KIAA1109Q2LD37 5005 aa8.41□□□□□ -1.06
UPF3B-204ENST00000619445 IGLV2-18A0A075B6J9 118 aa8.41□□□□□ -1.06
UPF3B-204ENST00000619445 F5H768 121 aa8.41□□□□□ -1.06
UPF3B-204ENST00000619445 L7N2F9 121 aa8.41□□□□□ -1.06
UPF3B-204ENST00000619445 COX7A2P2O60397 106 aa8.41□□□□□ -1.06
UPF3B-204ENST00000619445 CCL18P55774 89 aa8.41□□□□□ -1.06
UPF3B-204ENST00000619445 VAMP2P63027 116 aa8.41□□□□□ -1.06
UPF3B-204ENST00000619445 BAK1Q16611 211 aa8.41□□□□□ -1.06
UPF3B-204ENST00000619445 GUK1Q16774 197 aa8.41□□□□□ -1.06
UPF3B-204ENST00000619445 Q6ZRG5 221 aa8.41□□□□□ -1.06
UPF3B-204ENST00000619445 LINC00305Q7Z4B0 112 aa8.41□□□□□ -1.06
UPF3B-204ENST00000619445 TMEM263Q8WUH6 116 aaKnown RBP8.41□□□□□ -1.06
UPF3B-204ENST00000619445 ZNF331Q9NQX6 463 aaPredicted RBP8.41□□□□□ -1.06
UPF3B-204ENST00000619445 PLA2G2EQ9NZK7 142 aa8.41□□□□□ -1.06
UPF3B-204ENST00000619445 GSKIPQ9P0R6 139 aa8.41□□□□□ -1.06
UPF3B-204ENST00000619445 FLVCR2Q9UPI3 526 aa8.41□□□□□ -1.06
UPF3B-204ENST00000619445 DNAH2Q9P225 4427 aa8.41□□□□□ -1.06
UPF3B-204ENST00000619445 PKHD1P08F94 4074 aa8.41□□□□□ -1.06
UPF3B-204ENST00000619445 AGPAT2O15120 278 aa8.4□□□□□ -1.06
UPF3B-204ENST00000619445 SLC38A11Q08AI6 406 aa8.4□□□□□ -1.06
UPF3B-204ENST00000619445 IGFL4Q6B9Z1 124 aa8.4□□□□□ -1.06
UPF3B-204ENST00000619445 CCDC28AQ8IWP9 274 aa8.4□□□□□ -1.06
UPF3B-204ENST00000619445 RCL1Q9Y2P8 373 aaKnown RBP8.4□□□□□ -1.06
UPF3B-204ENST00000619445 TRAV12-2A0A075B6T6 113 aa8.39□□□□□ -1.07
UPF3B-204ENST00000619445 C7orf66A4D0T2 115 aa8.39□□□□□ -1.07
UPF3B-204ENST00000619445 MRPS12O15235 138 aaKnown RBP8.39□□□□□ -1.07
UPF3B-204ENST00000619445 PVALBP20472 110 aaPredicted RBP8.39□□□□□ -1.07
UPF3B-204ENST00000619445 C10orf113Q5VZT2 155 aa8.39□□□□□ -1.07
UPF3B-204ENST00000619445 PATE2Q6UY27 113 aa8.39□□□□□ -1.07
UPF3B-204ENST00000619445 C12orf45Q8N5I9 185 aaPredicted RBP8.39□□□□□ -1.07
UPF3B-204ENST00000619445 OR1L4Q8NGR5 311 aa8.39□□□□□ -1.07
UPF3B-204ENST00000619445 ODF3Q96PU9 254 aa8.39□□□□□ -1.07
UPF3B-204ENST00000619445 PFDN5Q99471 154 aa8.39□□□□□ -1.07
UPF3B-204ENST00000619445 LINC00854A0A1B0GVQ3 168 aa8.38□□□□□ -1.07
UPF3B-204ENST00000619445 PLAC8L1A1L4L8 177 aa8.38□□□□□ -1.07
UPF3B-204ENST00000619445 MBPP02686 304 aaPredicted RBP8.38□□□□□ -1.07
UPF3B-204ENST00000619445 IL7P13232 177 aa8.38□□□□□ -1.07
UPF3B-204ENST00000619445 CAMLGP49069 296 aa8.38□□□□□ -1.07
UPF3B-204ENST00000619445 CLINT1Q14677 625 aa8.38□□□□□ -1.07
UPF3B-204ENST00000619445 ZNF503Q96F45 646 aa8.38□□□□□ -1.07
UPF3B-204ENST00000619445 DNAJC4Q9NNZ3 241 aa8.38□□□□□ -1.07
UPF3B-204ENST00000619445 ZNF253O75346 499 aa8.37□□□□□ -1.07
UPF3B-204ENST00000619445 CCNKO75909 580 aa8.37□□□□□ -1.07
UPF3B-204ENST00000619445 NUDT3O95989 172 aa8.37□□□□□ -1.07
UPF3B-204ENST00000619445 HTN1P15515 57 aa8.37□□□□□ -1.07
UPF3B-204ENST00000619445 AZU1P20160 251 aa8.37□□□□□ -1.07
UPF3B-204ENST00000619445 BTCP35070 178 aa8.37□□□□□ -1.07
UPF3B-204ENST00000619445 LEPP41159 167 aa8.37□□□□□ -1.07
UPF3B-204ENST00000619445 HBG1P69891 147 aa8.37□□□□□ -1.07
UPF3B-204ENST00000619445 HBG2P69892 147 aa8.37□□□□□ -1.07
UPF3B-204ENST00000619445 RNASE8Q8TDE3 154 aaKnown RBP8.37□□□□□ -1.07
UPF3B-204ENST00000619445 C20orf85Q9H1P6 137 aa8.37□□□□□ -1.07
UPF3B-204ENST00000619445 UQCC1Q9NVA1 299 aa8.37□□□□□ -1.07
UPF3B-204ENST00000619445 NDUFA13Q9P0J0 144 aa8.37□□□□□ -1.07
UPF3B-204ENST00000619445 NBDYA0A0U1RRE5 68 aa8.36□□□□□ -1.07
UPF3B-204ENST00000619445 SNURFLB1AK76 121 aa8.36□□□□□ -1.07
UPF3B-204ENST00000619445 LYRM1O43325 122 aa8.36□□□□□ -1.07
UPF3B-204ENST00000619445 S100A11P31949 105 aa8.36□□□□□ -1.07
UPF3B-204ENST00000619445 BCAP31P51572 246 aa8.36□□□□□ -1.07
UPF3B-204ENST00000619445 CAV2P51636 162 aa8.36□□□□□ -1.07
UPF3B-204ENST00000619445 LINC01559Q495D7 138 aa8.36□□□□□ -1.07
UPF3B-204ENST00000619445 STX12Q86Y82 276 aa8.36□□□□□ -1.07
UPF3B-204ENST00000619445 ZNRF2Q8NHG8 242 aa8.36□□□□□ -1.07
UPF3B-204ENST00000619445 TMEM37Q8WXS4 190 aa8.36□□□□□ -1.07
UPF3B-204ENST00000619445 MRPL53Q96EL3 112 aaKnown RBP8.36□□□□□ -1.07
UPF3B-204ENST00000619445 SDHCQ99643 169 aaPredicted RBP8.36□□□□□ -1.07
UPF3B-204ENST00000619445 MGST2Q99735 147 aa8.36□□□□□ -1.07
UPF3B-204ENST00000619445 NOP10Q9NPE3 64 aaKnown RBP8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms