RNA–Protein interactions for RNA: ENST00000614240.4

SMN2-213, Transcript of survival of motor neuron 2, centromeric, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SMN2, Length 804 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-213ENST00000614240 ZNF493Q6ZR52 646 aa12.49□□□□□ -0.41
SMN2-213ENST00000614240 SSX7Q7RTT5 188 aa12.49□□□□□ -0.41
SMN2-213ENST00000614240 MAPKAPK5-AS1Q8N8E1 139 aa12.49□□□□□ -0.41
SMN2-213ENST00000614240 ARL6Q9H0F7 186 aa12.49□□□□□ -0.41
SMN2-213ENST00000614240 OR10J6PQ8NGY7 276 aa12.48□□□□□ -0.41
SMN2-213ENST00000614240 DEDD2Q8WXF8 326 aa12.48□□□□□ -0.41
SMN2-213ENST00000614240 MGAT4CQ9UBM8 478 aa12.48□□□□□ -0.41
SMN2-213ENST00000614240 S100A5P33763 92 aa12.47□□□□□ -0.41
SMN2-213ENST00000614240 UBE2MP61081 183 aaKnown RBP12.47□□□□□ -0.41
SMN2-213ENST00000614240 DLK1P80370 383 aa12.47□□□□□ -0.41
SMN2-213ENST00000614240 CCDC28AQ8IWP9 274 aa12.47□□□□□ -0.41
SMN2-213ENST00000614240 OR10P1Q8NGE3 313 aa12.47□□□□□ -0.41
SMN2-213ENST00000614240 GNPNAT1Q96EK6 184 aaPredicted RBP12.47□□□□□ -0.41
SMN2-213ENST00000614240 SMIM8Q96KF7 97 aa12.47□□□□□ -0.41
SMN2-213ENST00000614240 ARV1Q9H2C2 271 aa12.47□□□□□ -0.41
SMN2-213ENST00000614240 Q9H8V8 135 aa12.47□□□□□ -0.41
SMN2-213ENST00000614240 NPVFQ9HCQ7 196 aa12.47□□□□□ -0.41
SMN2-213ENST00000614240 C9orf170A2RU37 121 aa12.46□□□□□ -0.41
SMN2-213ENST00000614240 PMS2P5A8MQ11 134 aa12.46□□□□□ -0.41
SMN2-213ENST00000614240 H7BYZ3 331 aa12.46□□□□□ -0.41
SMN2-213ENST00000614240 GOSR2O14653 212 aa12.46□□□□□ -0.41
SMN2-213ENST00000614240 SCGB1D2O95969 90 aa12.46□□□□□ -0.41
SMN2-213ENST00000614240 METTL15P1P0C7V9 234 aa12.46□□□□□ -0.41
SMN2-213ENST00000614240 TMEM263Q8WUH6 116 aaKnown RBP12.46□□□□□ -0.41
SMN2-213ENST00000614240 V9GYH0 126 aa12.46□□□□□ -0.41
SMN2-213ENST00000614240 PKHD1P08F94 4074 aa12.45□□□□□ -0.42
SMN2-213ENST00000614240 CCNKO75909 580 aa12.45□□□□□ -0.42
SMN2-213ENST00000614240 SNRPCP09234 159 aaKnown RBP12.45□□□□□ -0.42
SMN2-213ENST00000614240 INPP1P49441 399 aa12.45□□□□□ -0.42
SMN2-213ENST00000614240 SLC38A11Q08AI6 406 aa12.45□□□□□ -0.42
SMN2-213ENST00000614240 TEPPQ6URK8 271 aa12.45□□□□□ -0.42
SMN2-213ENST00000614240 LCN15Q6UWW0 184 aa12.45□□□□□ -0.42
SMN2-213ENST00000614240 PATE2Q6UY27 113 aa12.45□□□□□ -0.42
SMN2-213ENST00000614240 CCDC190Q86UF4 302 aa12.45□□□□□ -0.42
SMN2-213ENST00000614240 RNASE8Q8TDE3 154 aaKnown RBP12.45□□□□□ -0.42
SMN2-213ENST00000614240 FAT2Q9NYQ8 4349 aa12.45□□□□□ -0.42
SMN2-213ENST00000614240 TRAV26-1A0A087WT03 109 aa12.44□□□□□ -0.42
SMN2-213ENST00000614240 A0A0J9YY99 117 aa12.44□□□□□ -0.42
SMN2-213ENST00000614240 CXCL2P19875 107 aa12.44□□□□□ -0.42
SMN2-213ENST00000614240 M6PRP20645 277 aa12.44□□□□□ -0.42
SMN2-213ENST00000614240 TTC32Q5I0X7 151 aa12.44□□□□□ -0.42
SMN2-213ENST00000614240 PXDC1Q5TGL8 231 aa12.44□□□□□ -0.42
SMN2-213ENST00000614240 SPATA12Q7Z6I5 190 aa12.44□□□□□ -0.42
SMN2-213ENST00000614240 C20orf144Q9BQM9 153 aa12.44□□□□□ -0.42
SMN2-213ENST00000614240 SLC50A1Q9BRV3 221 aa12.44□□□□□ -0.42
SMN2-213ENST00000614240 ZNF331Q9NQX6 463 aaPredicted RBP12.44□□□□□ -0.42
SMN2-213ENST00000614240 DNAH17Q9UFH2 4485 aa12.43□□□□□ -0.42
SMN2-213ENST00000614240 GAGE12BA1L429 117 aa12.43□□□□□ -0.42
SMN2-213ENST00000614240 FNDC10F2Z333 226 aa12.43□□□□□ -0.42
SMN2-213ENST00000614240 GAGE7O76087 117 aa12.43□□□□□ -0.42
SMN2-213ENST00000614240 RLN2P04090 185 aa12.43□□□□□ -0.42
SMN2-213ENST00000614240 GAGE12FP0CL80 117 aa12.43□□□□□ -0.42
SMN2-213ENST00000614240 GAGE12GP0CL81 117 aa12.43□□□□□ -0.42
SMN2-213ENST00000614240 GAGE12IP0CL82 117 aa12.43□□□□□ -0.42
SMN2-213ENST00000614240 TMEM14EPQ6UXP3 125 aa12.43□□□□□ -0.42
SMN2-213ENST00000614240 LINC00305Q7Z4B0 112 aa12.43□□□□□ -0.42
SMN2-213ENST00000614240 ZNF546Q86UE3 836 aa12.43□□□□□ -0.42
SMN2-213ENST00000614240 BPIFA4PQ86YQ2 179 aa12.43□□□□□ -0.42
SMN2-213ENST00000614240 RXFP4Q8TDU9 374 aa12.43□□□□□ -0.42
SMN2-213ENST00000614240 PARD6GQ9BYG4 376 aaPredicted RBP12.43□□□□□ -0.42
SMN2-213ENST00000614240 DNAH2Q9P225 4427 aa12.42□□□□□ -0.42
SMN2-213ENST00000614240 CCDC160A6NGH7 325 aa12.42□□□□□ -0.42
SMN2-213ENST00000614240 SNURFLB1AK76 121 aa12.42□□□□□ -0.42
SMN2-213ENST00000614240 K7EPK0 472 aa12.42□□□□□ -0.42
SMN2-213ENST00000614240 COX7A2P2O60397 106 aa12.42□□□□□ -0.42
SMN2-213ENST00000614240 KIR3DS1Q14943 382 aa12.42□□□□□ -0.42
SMN2-213ENST00000614240 GSKIPQ9P0R6 139 aa12.42□□□□□ -0.42
SMN2-213ENST00000614240 H3BTX0 84 aa12.41□□□□□ -0.42
SMN2-213ENST00000614240 J3KRW8 73 aa12.41□□□□□ -0.42
SMN2-213ENST00000614240 ZNF701M0R085 212 aaPredicted RBP12.41□□□□□ -0.42
SMN2-213ENST00000614240 AGPAT2O15120 278 aa12.41□□□□□ -0.42
SMN2-213ENST00000614240 MRPS12O15235 138 aaKnown RBP12.41□□□□□ -0.42
SMN2-213ENST00000614240 NDUFB6O95139 128 aa12.41□□□□□ -0.42
SMN2-213ENST00000614240 IAH1Q2TAA2 248 aaPredicted RBP12.41□□□□□ -0.42
SMN2-213ENST00000614240 C4orf46Q504U0 113 aa12.41□□□□□ -0.42
SMN2-213ENST00000614240 ZNF503Q96F45 646 aa12.41□□□□□ -0.42
SMN2-213ENST00000614240 FLVCR2Q9UPI3 526 aa12.41□□□□□ -0.42
SMN2-213ENST00000614240 NAP1L6A6NFF2 107 aa12.4□□□□□ -0.42
SMN2-213ENST00000614240 TSC22D2O75157 780 aa12.4□□□□□ -0.42
SMN2-213ENST00000614240 OR4E1P0C645 316 aa12.4□□□□□ -0.42
SMN2-213ENST00000614240 TAS2R30P59541 319 aa12.4□□□□□ -0.42
SMN2-213ENST00000614240 SPANXN2Q5MJ10 180 aa12.4□□□□□ -0.42
SMN2-213ENST00000614240 GFI1BQ5VTD9 330 aa12.4□□□□□ -0.42
SMN2-213ENST00000614240 PXMP4Q9Y6I8 212 aa12.4□□□□□ -0.42
SMN2-213ENST00000614240 LINC00854A0A1B0GVQ3 168 aa12.39□□□□□ -0.43
SMN2-213ENST00000614240 PRAC2D3DTV9 90 aa12.39□□□□□ -0.43
SMN2-213ENST00000614240 HOXA5P20719 270 aa12.39□□□□□ -0.43
SMN2-213ENST00000614240 LEPP41159 167 aa12.39□□□□□ -0.43
SMN2-213ENST00000614240 ESRGQ1W209 222 aa12.39□□□□□ -0.43
SMN2-213ENST00000614240 C10orf113Q5VZT2 155 aa12.39□□□□□ -0.43
SMN2-213ENST00000614240 TRIQKQ629K1 86 aa12.39□□□□□ -0.43
SMN2-213ENST00000614240 Q8N1X5 172 aa12.39□□□□□ -0.43
SMN2-213ENST00000614240 LINC00612Q8N6U2 182 aa12.39□□□□□ -0.43
SMN2-213ENST00000614240 Q9H3A6 140 aa12.39□□□□□ -0.43
SMN2-213ENST00000614240 PKD1P98161 4303 aa12.38□□□□□ -0.43
SMN2-213ENST00000614240 TRAV12-3A0A0B4J271 114 aa12.38□□□□□ -0.43
SMN2-213ENST00000614240 SLC17A3O00476 420 aa12.38□□□□□ -0.43
SMN2-213ENST00000614240 ZBTB8BQ8NAP8 495 aaPredicted RBP12.38□□□□□ -0.43
SMN2-213ENST00000614240 GGACTQ9BVM4 153 aa12.38□□□□□ -0.43
SMN2-213ENST00000614240 KRTAP1-5Q9BYS1 174 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms