RNA–Protein interactions for RNA: ENST00000613547.4

MDC1-209, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 5 BASIC

Gene MDC1, Length 830 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-209ENST00000613547 SBSPONQ8IVN8 264 aa9.82□□□□□ -0.84
MDC1-209ENST00000613547 KIR2DL5AQ8N109 375 aa9.82□□□□□ -0.84
MDC1-209ENST00000613547 OR10G4Q8NGN3 311 aa9.82□□□□□ -0.84
MDC1-209ENST00000613547 OR10G9Q8NGN4 311 aa9.82□□□□□ -0.84
MDC1-209ENST00000613547 OR10G7Q8NGN6 311 aa9.82□□□□□ -0.84
MDC1-209ENST00000613547 KIR2DL5BQ8NHK3 375 aa9.82□□□□□ -0.84
MDC1-209ENST00000613547 ZMAT4Q9H898 229 aa9.82□□□□□ -0.84
MDC1-209ENST00000613547 CLEC5AQ9NY25 188 aa9.82□□□□□ -0.84
MDC1-209ENST00000613547 A0A1B0GVG6 124 aa9.81□□□□□ -0.84
MDC1-209ENST00000613547 UBE2CO00762 179 aa9.81□□□□□ -0.84
MDC1-209ENST00000613547 IGLC2P0DOY2 106 aa9.81□□□□□ -0.84
MDC1-209ENST00000613547 RPL35AP18077 110 aaKnown RBP9.81□□□□□ -0.84
MDC1-209ENST00000613547 ZFP69Q49AA0 526 aa9.81□□□□□ -0.84
MDC1-209ENST00000613547 FOXI2Q6ZQN5 318 aa9.81□□□□□ -0.84
MDC1-209ENST00000613547 TMUB2Q71RG4 321 aa9.81□□□□□ -0.84
MDC1-209ENST00000613547 C17orf77Q96MU5 243 aa9.81□□□□□ -0.84
MDC1-209ENST00000613547 ZNF471Q9BX82 626 aaPredicted RBP9.81□□□□□ -0.84
MDC1-209ENST00000613547 SLC25A2Q9BXI2 301 aa9.81□□□□□ -0.84
MDC1-209ENST00000613547 SH3BGRL3Q9H299 93 aa9.81□□□□□ -0.84
MDC1-209ENST00000613547 OR51M1Q9H341 326 aa9.81□□□□□ -0.84
MDC1-209ENST00000613547 CYTL1Q9NRR1 136 aa9.81□□□□□ -0.84
MDC1-209ENST00000613547 KNCNA6PVL3 124 aa9.8□□□□□ -0.84
MDC1-209ENST00000613547 H3BQ15 152 aa9.8□□□□□ -0.84
MDC1-209ENST00000613547 SNRPCP09234 159 aaKnown RBP9.8□□□□□ -0.84
MDC1-209ENST00000613547 C4BPBP20851 252 aa9.8□□□□□ -0.84
MDC1-209ENST00000613547 CDC34P49427 236 aaPredicted RBP9.8□□□□□ -0.84
MDC1-209ENST00000613547 NUTF2P61970 127 aaKnown RBP9.8□□□□□ -0.84
MDC1-209ENST00000613547 PDE6HQ13956 83 aa9.8□□□□□ -0.84
MDC1-209ENST00000613547 TMEM41BQ5BJD5 291 aa9.8□□□□□ -0.84
MDC1-209ENST00000613547 AKR1C8PQ5T2L2 129 aa9.8□□□□□ -0.84
MDC1-209ENST00000613547 FAM122CQ6P4D5 195 aa9.8□□□□□ -0.84
MDC1-209ENST00000613547 FAM167A-AS1Q96KT0 104 aa9.8□□□□□ -0.84
MDC1-209ENST00000613547 SPATA25Q9BR10 227 aa9.8□□□□□ -0.84
MDC1-209ENST00000613547 PAXXQ9BUH6 204 aa9.8□□□□□ -0.84
MDC1-209ENST00000613547 ZNF331Q9NQX6 463 aaPredicted RBP9.8□□□□□ -0.84
MDC1-209ENST00000613547 RFNGQ9Y644 331 aa9.8□□□□□ -0.84
MDC1-209ENST00000613547 TRBV19A0A075B6N1 114 aa9.79□□□□□ -0.84
MDC1-209ENST00000613547 TRAV8-2A0A0B4J237 113 aa9.79□□□□□ -0.84
MDC1-209ENST00000613547 H3BTX0 84 aa9.79□□□□□ -0.84
MDC1-209ENST00000613547 ZNF253O75346 499 aa9.79□□□□□ -0.84
MDC1-209ENST00000613547 NBEAP1P0C6P0 100 aa9.79□□□□□ -0.84
MDC1-209ENST00000613547 PYYP10082 97 aa9.79□□□□□ -0.84
MDC1-209ENST00000613547 TPT1P13693 172 aaKnown RBP9.79□□□□□ -0.84
MDC1-209ENST00000613547 HLA-DRB4P13762 266 aa9.79□□□□□ -0.84
MDC1-209ENST00000613547 UBE2L3P68036 154 aaKnown RBP9.79□□□□□ -0.84
MDC1-209ENST00000613547 PSG9Q00887 426 aa9.79□□□□□ -0.84
MDC1-209ENST00000613547 PSG3Q16557 428 aa9.79□□□□□ -0.84
MDC1-209ENST00000613547 MORN3Q6PF18 240 aaPredicted RBP9.79□□□□□ -0.84
MDC1-209ENST00000613547 PQLC2Q6ZP29 291 aa9.79□□□□□ -0.84
MDC1-209ENST00000613547 TRPT1Q86TN4 253 aaKnown RBP9.79□□□□□ -0.84
MDC1-209ENST00000613547 RNF182Q8N6D2 247 aa9.79□□□□□ -0.84
MDC1-209ENST00000613547 ZNF738Q8NE65 137 aa9.79□□□□□ -0.84
MDC1-209ENST00000613547 RNF141Q8WVD5 230 aa9.79□□□□□ -0.84
MDC1-209ENST00000613547 TM2D3Q9BRN9 247 aa9.79□□□□□ -0.84
MDC1-209ENST00000613547 ACTR3CQ9C0K3 210 aaPredicted RBP9.79□□□□□ -0.84
MDC1-209ENST00000613547 CSTL1Q9H114 145 aa9.79□□□□□ -0.84
MDC1-209ENST00000613547 SAV1Q9H4B6 383 aaPredicted RBP9.79□□□□□ -0.84
MDC1-209ENST00000613547 AAMDCQ9H7C9 122 aa9.79□□□□□ -0.84
MDC1-209ENST00000613547 ZNF586Q9NXT0 402 aa9.79□□□□□ -0.84
MDC1-209ENST00000613547 HLA-DRB4X5D2U9 266 aa9.79□□□□□ -0.84
MDC1-209ENST00000613547 OR10J4P0C629 311 aa9.78□□□□□ -0.84
MDC1-209ENST00000613547 SPP1P10451 314 aa9.78□□□□□ -0.84
MDC1-209ENST00000613547 IGFL4Q6B9Z1 124 aa9.78□□□□□ -0.84
MDC1-209ENST00000613547 BLNKQ8WV28 456 aa9.78□□□□□ -0.84
MDC1-209ENST00000613547 SAT2Q96F10 170 aaPredicted RBP9.78□□□□□ -0.84
MDC1-209ENST00000613547 H3BMM0 161 aa9.77□□□□□ -0.85
MDC1-209ENST00000613547 SLC17A3O00476 420 aa9.77□□□□□ -0.85
MDC1-209ENST00000613547 DUSP14O95147 198 aaKnown RBP9.77□□□□□ -0.85
MDC1-209ENST00000613547 CA1P00915 261 aaPredicted RBP9.77□□□□□ -0.85
MDC1-209ENST00000613547 SEC11BP0C7V7 166 aa9.77□□□□□ -0.85
MDC1-209ENST00000613547 Q6ZWC4 215 aa9.77□□□□□ -0.85
MDC1-209ENST00000613547 BAP18Q8IXM2 172 aa9.77□□□□□ -0.85
MDC1-209ENST00000613547 RPP25LQ8N5L8 163 aaKnown RBP9.77□□□□□ -0.85
MDC1-209ENST00000613547 OR4B1Q8NGF8 309 aa9.77□□□□□ -0.85
MDC1-209ENST00000613547 RPUSD4Q96CM3 377 aaKnown RBP9.77□□□□□ -0.85
MDC1-209ENST00000613547 C20orf173Q96LM9 149 aa9.77□□□□□ -0.85
MDC1-209ENST00000613547 PRELID1Q9Y255 219 aa9.77□□□□□ -0.85
MDC1-209ENST00000613547 PRKDCP78527 4128 aaKnown RBP9.77□□□□□ -0.85
MDC1-209ENST00000613547 A0A0J9YX75 114 aa9.76□□□□□ -0.85
MDC1-209ENST00000613547 UMAD1C9J7I0 102 aa9.76□□□□□ -0.85
MDC1-209ENST00000613547 LGALSLQ3ZCW2 172 aaPredicted RBP9.76□□□□□ -0.85
MDC1-209ENST00000613547 EIF5AL1Q6IS14 154 aaKnown RBP9.76□□□□□ -0.85
MDC1-209ENST00000613547 RAB24Q969Q5 203 aa9.76□□□□□ -0.85
MDC1-209ENST00000613547 FXYD5Q96DB9 178 aa9.76□□□□□ -0.85
MDC1-209ENST00000613547 MRPL53Q96EL3 112 aaKnown RBP9.76□□□□□ -0.85
MDC1-209ENST00000613547 CLUHP3Q96NS8 147 aa9.76□□□□□ -0.85
MDC1-209ENST00000613547 C1QTNF4Q9BXJ3 329 aa9.76□□□□□ -0.85
MDC1-209ENST00000613547 F6UB75 175 aa9.75□□□□□ -0.85
MDC1-209ENST00000613547 HMGB3O15347 200 aaKnown RBP9.75□□□□□ -0.85
MDC1-209ENST00000613547 CXorf1O96002 111 aa9.75□□□□□ -0.85
MDC1-209ENST00000613547 IGKV3-20P01619 116 aa9.75□□□□□ -0.85
MDC1-209ENST00000613547 STAG3L2P0CL84 134 aa9.75□□□□□ -0.85
MDC1-209ENST00000613547 STAG3L3P0CL85 134 aa9.75□□□□□ -0.85
MDC1-209ENST00000613547 ARL14EPLP0DKL9 152 aa9.75□□□□□ -0.85
MDC1-209ENST00000613547 HLA-DMBP28068 263 aa9.75□□□□□ -0.85
MDC1-209ENST00000613547 DEFB1P60022 68 aa9.75□□□□□ -0.85
MDC1-209ENST00000613547 HIST1H1AQ02539 215 aaPredicted RBP9.75□□□□□ -0.85
MDC1-209ENST00000613547 CD300CQ08708 224 aa9.75□□□□□ -0.85
MDC1-209ENST00000613547 FAM74A1Q5RGS3 127 aa9.75□□□□□ -0.85
MDC1-209ENST00000613547 GDF5OSQ5U4N7 250 aa9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 761 ms