RNA–Protein interactions for RNA: ENST00000613459.4

HMGXB3-206, Transcript of HMG-box containing 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene HMGXB3, Length 5,567 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-206ENST00000613459 KLF12Q9Y4X4 402 aa14.14□□□□□ -0.15
HMGXB3-206ENST00000613459 FXYD7P58549 80 aa14.14□□□□□ -0.15
HMGXB3-206ENST00000613459 ZNF48Q96MX3 618 aaPredicted RBP14.14□□□□□ -0.15
HMGXB3-206ENST00000613459 NSUN5P1Q3KNT7 163 aa14.13□□□□□ -0.15
HMGXB3-206ENST00000613459 Q6ZS92 163 aa14.13□□□□□ -0.15
HMGXB3-206ENST00000613459 SS18Q15532 418 aa14.13□□□□□ -0.15
HMGXB3-206ENST00000613459 A0A0G2JNJ9 132 aa14.13□□□□□ -0.15
HMGXB3-206ENST00000613459 KLRD1Q13241 179 aa14.13□□□□□ -0.15
HMGXB3-206ENST00000613459 GAGE2AQ6NT46 116 aa14.13□□□□□ -0.15
HMGXB3-206ENST00000613459 PIP4P2Q8N4L2 257 aa14.13□□□□□ -0.15
HMGXB3-206ENST00000613459 FAM110DQ8TAY7 271 aaPredicted RBP14.13□□□□□ -0.15
HMGXB3-206ENST00000613459 Q9UFV3 132 aa14.13□□□□□ -0.15
HMGXB3-206ENST00000613459 ANAPC10Q9UM13 185 aa14.13□□□□□ -0.15
HMGXB3-206ENST00000613459 SRD5A1P18405 259 aa14.13□□□□□ -0.15
HMGXB3-206ENST00000613459 WFDC12Q8WWY7 111 aa14.13□□□□□ -0.15
HMGXB3-206ENST00000613459 MESP1Q9BRJ9 268 aa14.13□□□□□ -0.15
HMGXB3-206ENST00000613459 Q8TCH9 128 aa14.12□□□□□ -0.15
HMGXB3-206ENST00000613459 RHPN1-AS1Q9BWJ2 59 aa14.12□□□□□ -0.15
HMGXB3-206ENST00000613459 C6orf226Q5I0X4 101 aa14.12□□□□□ -0.15
HMGXB3-206ENST00000613459 C9JAW5 83 aa14.12□□□□□ -0.15
HMGXB3-206ENST00000613459 LMO1P25800 156 aa14.12□□□□□ -0.15
HMGXB3-206ENST00000613459 LINC01356Q8N9X3 169 aa14.12□□□□□ -0.15
HMGXB3-206ENST00000613459 LIME1Q9H400 295 aa14.12□□□□□ -0.15
HMGXB3-206ENST00000613459 RNF114Q9Y508 228 aa14.12□□□□□ -0.15
HMGXB3-206ENST00000613459 ETV2O00321 342 aaPredicted RBP14.11□□□□□ -0.15
HMGXB3-206ENST00000613459 ZDBF2Q9HCK1 2354 aa14.11□□□□□ -0.15
HMGXB3-206ENST00000613459 LTBP1Q14766 1721 aa14.11□□□□□ -0.15
HMGXB3-206ENST00000613459 PRSS46E5RG02 174 aa14.11□□□□□ -0.15
HMGXB3-206ENST00000613459 E9PQ18 207 aa14.11□□□□□ -0.15
HMGXB3-206ENST00000613459 H3BMM0 161 aa14.11□□□□□ -0.15
HMGXB3-206ENST00000613459 UBE2WQ96B02 151 aa14.11□□□□□ -0.15
HMGXB3-206ENST00000613459 TRBV20-1A0A075B6N2 111 aa14.11□□□□□ -0.15
HMGXB3-206ENST00000613459 FCN3O75636 299 aa14.11□□□□□ -0.15
HMGXB3-206ENST00000613459 TMEM219Q86XT9 240 aa14.11□□□□□ -0.15
HMGXB3-206ENST00000613459 AMN1Q8IY45 258 aa14.11□□□□□ -0.15
HMGXB3-206ENST00000613459 IGHV3-73A0A0B4J1V6 119 aa14.1□□□□□ -0.15
HMGXB3-206ENST00000613459 C14orf178Q8N769 122 aaPredicted RBP14.1□□□□□ -0.15
HMGXB3-206ENST00000613459 LINC00527Q9UJ94 153 aa14.1□□□□□ -0.15
HMGXB3-206ENST00000613459 IL17RELQ6ZVW7 336 aa14.1□□□□□ -0.15
HMGXB3-206ENST00000613459 UBE2DNLQ8IWF7 75 aa14.1□□□□□ -0.15
HMGXB3-206ENST00000613459 GATA4P43694 442 aa14.1□□□□□ -0.15
HMGXB3-206ENST00000613459 Q8TAT8 98 aa14.1□□□□□ -0.15
HMGXB3-206ENST00000613459 C9orf118A6NHY6 69 aa14.09□□□□□ -0.15
HMGXB3-206ENST00000613459 GAGE1Q13065 139 aa14.09□□□□□ -0.15
HMGXB3-206ENST00000613459 INAFM2P0DMQ5 153 aa14.09□□□□□ -0.15
HMGXB3-206ENST00000613459 PRR31Q5SQ13 230 aa14.09□□□□□ -0.15
HMGXB3-206ENST00000613459 DOCK6Q96HP0 2047 aa14.09□□□□□ -0.15
HMGXB3-206ENST00000613459 TMEM14BQ9NUH8 114 aa14.09□□□□□ -0.15
HMGXB3-206ENST00000613459 C9orf153Q5TBE3 101 aa14.09□□□□□ -0.15
HMGXB3-206ENST00000613459 SMKR1H3BMG3 65 aa14.08□□□□□ -0.16
HMGXB3-206ENST00000613459 C1orf122Q6ZSJ8 110 aa14.08□□□□□ -0.16
HMGXB3-206ENST00000613459 UBE2E1P51965 193 aa14.08□□□□□ -0.16
HMGXB3-206ENST00000613459 FAM231DQ6ZW35 169 aa14.08□□□□□ -0.16
HMGXB3-206ENST00000613459 PRIMA1Q86XR5 153 aa14.07□□□□□ -0.16
HMGXB3-206ENST00000613459 Q8N8P6 123 aa14.07□□□□□ -0.16
HMGXB3-206ENST00000613459 A0A0G2JRQ6 117 aa14.07□□□□□ -0.16
HMGXB3-206ENST00000613459 F8W1H4 67 aa14.07□□□□□ -0.16
HMGXB3-206ENST00000613459 C18orf32Q8TCD1 76 aa14.07□□□□□ -0.16
HMGXB3-206ENST00000613459 C1orf159Q96HA4 380 aa14.07□□□□□ -0.16
HMGXB3-206ENST00000613459 RALGAPA1Q6GYQ0 2036 aa14.07□□□□□ -0.16
HMGXB3-206ENST00000613459 SDK2Q58EX2 2172 aa14.06□□□□□ -0.16
HMGXB3-206ENST00000613459 C5orf63A6NC05 138 aa14.06□□□□□ -0.16
HMGXB3-206ENST00000613459 PFN1P07737 140 aaKnown RBP14.06□□□□□ -0.16
HMGXB3-206ENST00000613459 TMEM14CQ9P0S9 112 aa14.06□□□□□ -0.16
HMGXB3-206ENST00000613459 A0A1W2PPI3 338 aa14.06□□□□□ -0.16
HMGXB3-206ENST00000613459 NDPQ00604 133 aa14.06□□□□□ -0.16
HMGXB3-206ENST00000613459 LINC00311Q8N616 119 aa14.06□□□□□ -0.16
HMGXB3-206ENST00000613459 SOCS3O14543 225 aa14.06□□□□□ -0.16
HMGXB3-206ENST00000613459 SRSF2Q01130 221 aaKnown RBP14.06□□□□□ -0.16
HMGXB3-206ENST00000613459 PPDPFLQ8WWR9 84 aa14.06□□□□□ -0.16
HMGXB3-206ENST00000613459 ZNF833PQ6ZTB9 187 aa14.06□□□□□ -0.16
HMGXB3-206ENST00000613459 SPXQ9BT56 116 aa14.06□□□□□ -0.16
HMGXB3-206ENST00000613459 NDUFA4L2Q9NRX3 87 aa14.06□□□□□ -0.16
HMGXB3-206ENST00000613459 ARMS2P0C7Q2 107 aa14.05□□□□□ -0.16
HMGXB3-206ENST00000613459 Q6ZRM9 215 aa14.05□□□□□ -0.16
HMGXB3-206ENST00000613459 PRB4P10163 310 aaPredicted RBP14.05□□□□□ -0.16
HMGXB3-206ENST00000613459 KLHL30-AS1Q8NEE0 82 aa14.05□□□□□ -0.16
HMGXB3-206ENST00000613459 OR11H6Q8NGC7 330 aa14.05□□□□□ -0.16
HMGXB3-206ENST00000613459 RSPO3Q9BXY4 272 aaPredicted RBP14.05□□□□□ -0.16
HMGXB3-206ENST00000613459 MDC1Q14676 2089 aaKnown RBP14.05□□□□□ -0.16
HMGXB3-206ENST00000613459 LY6DQ14210 128 aa14.05□□□□□ -0.16
HMGXB3-206ENST00000613459 FAM104BQ5XKR9 115 aa14.05□□□□□ -0.16
HMGXB3-206ENST00000613459 CDPF1Q6NVV7 123 aa14.05□□□□□ -0.16
HMGXB3-206ENST00000613459 CACNA1EQ15878 2313 aa14.05□□□□□ -0.16
HMGXB3-206ENST00000613459 UTF1Q5T230 341 aa14.04□□□□□ -0.16
HMGXB3-206ENST00000613459 STPG4Q8N801 248 aa14.04□□□□□ -0.16
HMGXB3-206ENST00000613459 ZNF318Q5VUA4 2279 aa14.04□□□□□ -0.16
HMGXB3-206ENST00000613459 K7EP34 96 aa14.04□□□□□ -0.16
HMGXB3-206ENST00000613459 SAA4P35542 130 aa14.04□□□□□ -0.16
HMGXB3-206ENST00000613459 KIF26BQ2KJY2 2108 aa14.04□□□□□ -0.16
HMGXB3-206ENST00000613459 MMP23AO75900 390 aa14.04□□□□□ -0.16
HMGXB3-206ENST00000613459 SNRNP200O75643 2136 aaKnown RBP14.04□□□□□ -0.16
HMGXB3-206ENST00000613459 FHL1Q13642 323 aa14.03□□□□□ -0.16
HMGXB3-206ENST00000613459 BOD1L2Q8IYS8 172 aa14.03□□□□□ -0.16
HMGXB3-206ENST00000613459 LCNL1Q6ZST4 164 aa14.03□□□□□ -0.16
HMGXB3-206ENST00000613459 COL8A2P25067 703 aa14.03□□□□□ -0.16
HMGXB3-206ENST00000613459 LYPD2Q6UXB3 125 aa14.03□□□□□ -0.16
HMGXB3-206ENST00000613459 INS-IGF2F8WCM5 200 aa14.03□□□□□ -0.16
HMGXB3-206ENST00000613459 HAPLN4Q86UW8 402 aa14.03□□□□□ -0.16
HMGXB3-206ENST00000613459 TRBV19A0A075B6N1 114 aa14.02□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms