RNA–Protein interactions for RNA: ENST00000602011.5

SHKBP1-227, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 897 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-227ENST00000602011 C6orf223Q8N319 242 aa12.52□□□□□ -0.41
SHKBP1-227ENST00000602011 OR10J6PQ8NGY7 276 aa12.52□□□□□ -0.41
SHKBP1-227ENST00000602011 ZNRF2Q8NHG8 242 aa12.52□□□□□ -0.41
SHKBP1-227ENST00000602011 SMIM8Q96KF7 97 aa12.52□□□□□ -0.41
SHKBP1-227ENST00000602011 PSENENQ9NZ42 101 aa12.52□□□□□ -0.41
SHKBP1-227ENST00000602011 LRP1BQ9NZR2 4599 aa12.52□□□□□ -0.41
SHKBP1-227ENST00000602011 SMCO3A2RU48 225 aa12.51□□□□□ -0.41
SHKBP1-227ENST00000602011 CDK2AP2O75956 126 aa12.51□□□□□ -0.41
SHKBP1-227ENST00000602011 OR5G3P0C626 314 aa12.51□□□□□ -0.41
SHKBP1-227ENST00000602011 LINC00869P0C866 280 aa12.51□□□□□ -0.41
SHKBP1-227ENST00000602011 CDKN1BP46527 198 aa12.51□□□□□ -0.41
SHKBP1-227ENST00000602011 DLK1P80370 383 aa12.51□□□□□ -0.41
SHKBP1-227ENST00000602011 NAP1L6A6NFF2 107 aa12.5□□□□□ -0.41
SHKBP1-227ENST00000602011 H7BYZ3 331 aa12.5□□□□□ -0.41
SHKBP1-227ENST00000602011 NUDT3O95989 172 aa12.5□□□□□ -0.41
SHKBP1-227ENST00000602011 BTF3P20290 206 aaKnown RBP12.5□□□□□ -0.41
SHKBP1-227ENST00000602011 TAS2R30P59541 319 aa12.5□□□□□ -0.41
SHKBP1-227ENST00000602011 HIST1H1AQ02539 215 aaPredicted RBP12.5□□□□□ -0.41
SHKBP1-227ENST00000602011 RNF182Q8N6D2 247 aa12.5□□□□□ -0.41
SHKBP1-227ENST00000602011 OR10P1Q8NGE3 313 aa12.5□□□□□ -0.41
SHKBP1-227ENST00000602011 ZNF503Q96F45 646 aa12.5□□□□□ -0.41
SHKBP1-227ENST00000602011 SRRQ9GZT4 340 aa12.5□□□□□ -0.41
SHKBP1-227ENST00000602011 NACAE9PAV3 2078 aa12.49□□□□□ -0.41
SHKBP1-227ENST00000602011 PLAC8L1A1L4L8 177 aa12.49□□□□□ -0.41
SHKBP1-227ENST00000602011 H3BP45 60 aa12.49□□□□□ -0.41
SHKBP1-227ENST00000602011 ANXA7P20073 488 aaKnown RBP12.49□□□□□ -0.41
SHKBP1-227ENST00000602011 AZU1P20160 251 aa12.49□□□□□ -0.41
SHKBP1-227ENST00000602011 POLR2GP62487 172 aaKnown RBP eCLIP12.49□□□□□ -0.41
SHKBP1-227ENST00000602011 CLINT1Q14677 625 aa12.49□□□□□ -0.41
SHKBP1-227ENST00000602011 IGFL4Q6B9Z1 124 aa12.49□□□□□ -0.41
SHKBP1-227ENST00000602011 TEPPQ6URK8 271 aa12.49□□□□□ -0.41
SHKBP1-227ENST00000602011 LCN15Q6UWW0 184 aa12.49□□□□□ -0.41
SHKBP1-227ENST00000602011 BAP18Q8IXM2 172 aa12.49□□□□□ -0.41
SHKBP1-227ENST00000602011 TMEM263Q8WUH6 116 aaKnown RBP12.49□□□□□ -0.41
SHKBP1-227ENST00000602011 SLC50A1Q9BRV3 221 aa12.49□□□□□ -0.41
SHKBP1-227ENST00000602011 GGACTQ9BVM4 153 aa12.49□□□□□ -0.41
SHKBP1-227ENST00000602011 MGAT4CQ9UBM8 478 aa12.49□□□□□ -0.41
SHKBP1-227ENST00000602011 TRAV12-2A0A075B6T6 113 aa12.48□□□□□ -0.41
SHKBP1-227ENST00000602011 C9orf170A2RU37 121 aa12.48□□□□□ -0.41
SHKBP1-227ENST00000602011 PMS2P5A8MQ11 134 aa12.48□□□□□ -0.41
SHKBP1-227ENST00000602011 C16orf90A8MZG2 172 aa12.48□□□□□ -0.41
SHKBP1-227ENST00000602011 TMEM14EPQ6UXP3 125 aa12.48□□□□□ -0.41
SHKBP1-227ENST00000602011 CCDC28AQ8IWP9 274 aa12.48□□□□□ -0.41
SHKBP1-227ENST00000602011 RPUSD4Q96CM3 377 aaKnown RBP12.48□□□□□ -0.41
SHKBP1-227ENST00000602011 ARL6Q9H0F7 186 aa12.48□□□□□ -0.41
SHKBP1-227ENST00000602011 TSC22D2O75157 780 aa12.47□□□□□ -0.41
SHKBP1-227ENST00000602011 PRM2P04554 102 aa12.47□□□□□ -0.41
SHKBP1-227ENST00000602011 INPP1P49441 399 aa12.47□□□□□ -0.41
SHKBP1-227ENST00000602011 TTC32Q5I0X7 151 aa12.47□□□□□ -0.41
SHKBP1-227ENST00000602011 ZNF546Q86UE3 836 aa12.47□□□□□ -0.41
SHKBP1-227ENST00000602011 BPIFA4PQ86YQ2 179 aa12.47□□□□□ -0.41
SHKBP1-227ENST00000602011 ARV1Q9H2C2 271 aa12.47□□□□□ -0.41
SHKBP1-227ENST00000602011 H3BNG1 76 aa12.46□□□□□ -0.41
SHKBP1-227ENST00000602011 GOSR2O14653 212 aa12.46□□□□□ -0.41
SHKBP1-227ENST00000602011 TNP2Q05952 138 aa12.46□□□□□ -0.41
SHKBP1-227ENST00000602011 TRIQKQ629K1 86 aa12.46□□□□□ -0.41
SHKBP1-227ENST00000602011 RNASE8Q8TDE3 154 aaKnown RBP12.46□□□□□ -0.41
SHKBP1-227ENST00000602011 LINC00588Q9Y4M8 146 aa12.46□□□□□ -0.41
SHKBP1-227ENST00000602011 NDUFB6O95139 128 aa12.45□□□□□ -0.42
SHKBP1-227ENST00000602011 HTN1P15515 57 aa12.45□□□□□ -0.42
SHKBP1-227ENST00000602011 ZNF846Q147U1 533 aa12.45□□□□□ -0.42
SHKBP1-227ENST00000602011 FCN2Q15485 313 aa12.45□□□□□ -0.42
SHKBP1-227ENST00000602011 RNF141Q8WVD5 230 aa12.45□□□□□ -0.42
SHKBP1-227ENST00000602011 UHRF2Q96PU4 802 aa12.45□□□□□ -0.42
SHKBP1-227ENST00000602011 CCDC32Q9BV29 185 aa12.45□□□□□ -0.42
SHKBP1-227ENST00000602011 Q9H8V8 135 aa12.45□□□□□ -0.42
SHKBP1-227ENST00000602011 NOP10Q9NPE3 64 aaKnown RBP12.45□□□□□ -0.42
SHKBP1-227ENST00000602011 ZNF331Q9NQX6 463 aaPredicted RBP12.45□□□□□ -0.42
SHKBP1-227ENST00000602011 A0A1W2PPQ1 181 aa12.44□□□□□ -0.42
SHKBP1-227ENST00000602011 MRPS12O15235 138 aaKnown RBP12.44□□□□□ -0.42
SHKBP1-227ENST00000602011 SSSCA1O60232 199 aa12.44□□□□□ -0.42
SHKBP1-227ENST00000602011 M6PRP20645 277 aa12.44□□□□□ -0.42
SHKBP1-227ENST00000602011 RAB31Q13636 194 aa12.44□□□□□ -0.42
SHKBP1-227ENST00000602011 BAK1Q16611 211 aa12.44□□□□□ -0.42
SHKBP1-227ENST00000602011 PATE2Q6UY27 113 aa12.44□□□□□ -0.42
SHKBP1-227ENST00000602011 SSX7Q7RTT5 188 aa12.44□□□□□ -0.42
SHKBP1-227ENST00000602011 LINC00305Q7Z4B0 112 aa12.44□□□□□ -0.42
SHKBP1-227ENST00000602011 RXFP4Q8TDU9 374 aa12.44□□□□□ -0.42
SHKBP1-227ENST00000602011 GNPNAT1Q96EK6 184 aaPredicted RBP12.44□□□□□ -0.42
SHKBP1-227ENST00000602011 PXMP4Q9Y6I8 212 aa12.44□□□□□ -0.42
SHKBP1-227ENST00000602011 APOBP04114 4563 aaKnown RBP12.44□□□□□ -0.42
SHKBP1-227ENST00000602011 CENPXA8MT69 81 aa12.43□□□□□ -0.42
SHKBP1-227ENST00000602011 OR4E1P0C645 316 aa12.43□□□□□ -0.42
SHKBP1-227ENST00000602011 METTL15P1P0C7V9 234 aa12.43□□□□□ -0.42
SHKBP1-227ENST00000602011 RRAS2P62070 204 aaPredicted RBP12.43□□□□□ -0.42
SHKBP1-227ENST00000602011 GUK1Q16774 197 aa12.43□□□□□ -0.42
SHKBP1-227ENST00000602011 LINC00612Q8N6U2 182 aa12.43□□□□□ -0.42
SHKBP1-227ENST00000602011 MAPKAPK5-AS1Q8N8E1 139 aa12.43□□□□□ -0.42
SHKBP1-227ENST00000602011 ODF3Q96PU9 254 aa12.43□□□□□ -0.42
SHKBP1-227ENST00000602011 SDHCQ99643 169 aaPredicted RBP12.43□□□□□ -0.42
SHKBP1-227ENST00000602011 OR5I1Q13606 314 aa12.42□□□□□ -0.42
SHKBP1-227ENST00000602011 IAH1Q2TAA2 248 aaPredicted RBP12.42□□□□□ -0.42
SHKBP1-227ENST00000602011 UPK3BQ9BT76 320 aa12.42□□□□□ -0.42
SHKBP1-227ENST00000602011 SNURFLB1AK76 121 aa12.41□□□□□ -0.42
SHKBP1-227ENST00000602011 AGPAT2O15120 278 aa12.41□□□□□ -0.42
SHKBP1-227ENST00000602011 COX7A2P2O60397 106 aa12.41□□□□□ -0.42
SHKBP1-227ENST00000602011 RLN2P04090 185 aa12.41□□□□□ -0.42
SHKBP1-227ENST00000602011 IL7P13232 177 aa12.41□□□□□ -0.42
SHKBP1-227ENST00000602011 Q6ZRG5 221 aa12.41□□□□□ -0.42
SHKBP1-227ENST00000602011 LEPP41159 167 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms