RNA–Protein interactions for RNA: ENST00000601291.5

IRF3-228, Transcript of interferon regulatory factor 3, humanhuman

TSL 1 (best) BASIC

Gene IRF3, Length 1,556 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-228ENST00000601291 MYCNOSP40205 109 aa17.17■□□□□ 0.34
IRF3-228ENST00000601291 SMAD5-AS1Q9Y6J3 95 aa17.17■□□□□ 0.34
IRF3-228ENST00000601291 GGTLC3B5MD39 225 aa17.16■□□□□ 0.34
IRF3-228ENST00000601291 F6UZH7 168 aa17.16■□□□□ 0.34
IRF3-228ENST00000601291 SRP19P09132 144 aaKnown RBP17.16■□□□□ 0.34
IRF3-228ENST00000601291 SFTA3P0C7M3 94 aa17.16■□□□□ 0.34
IRF3-228ENST00000601291 LYPD1Q8N2G4 141 aa17.16■□□□□ 0.34
IRF3-228ENST00000601291 TMEM218A2RU14 115 aa17.15■□□□□ 0.34
IRF3-228ENST00000601291 CBLN1P23435 193 aa17.15■□□□□ 0.34
IRF3-228ENST00000601291 SUMO1P63165 101 aaKnown RBP17.15■□□□□ 0.34
IRF3-228ENST00000601291 PSG9Q00887 426 aa17.15■□□□□ 0.34
IRF3-228ENST00000601291 C17orf77Q96MU5 243 aa17.15■□□□□ 0.34
IRF3-228ENST00000601291 CITED1Q99966 193 aa17.15■□□□□ 0.34
IRF3-228ENST00000601291 Q9H3A6 140 aa17.15■□□□□ 0.34
IRF3-228ENST00000601291 KRBOX1C9JBD0 128 aa17.15■□□□□ 0.34
IRF3-228ENST00000601291 TMEM250H0YL14 139 aa17.15■□□□□ 0.34
IRF3-228ENST00000601291 ZNF253O75346 499 aa17.15■□□□□ 0.34
IRF3-228ENST00000601291 FOLR2P14207 255 aa17.15■□□□□ 0.34
IRF3-228ENST00000601291 EDN2P20800 178 aa17.15■□□□□ 0.34
IRF3-228ENST00000601291 TCEAL7Q9BRU2 100 aa17.15■□□□□ 0.34
IRF3-228ENST00000601291 OTORQ9NRC9 128 aa17.15■□□□□ 0.34
IRF3-228ENST00000601291 NDUFB4O95168 129 aa17.14■□□□□ 0.33
IRF3-228ENST00000601291 CEBPGP53567 150 aa17.14■□□□□ 0.33
IRF3-228ENST00000601291 CCDC28AQ8IWP9 274 aa17.14■□□□□ 0.33
IRF3-228ENST00000601291 CYB561D1Q8N8Q1 229 aa17.14■□□□□ 0.33
IRF3-228ENST00000601291 AAMDCQ9H7C9 122 aa17.14■□□□□ 0.33
IRF3-228ENST00000601291 TEP1Q99973 2627 aaKnown RBP17.13■□□□□ 0.33
IRF3-228ENST00000601291 PGPA6NDG6 321 aa17.13■□□□□ 0.33
IRF3-228ENST00000601291 SLC17A3O00476 420 aa17.13■□□□□ 0.33
IRF3-228ENST00000601291 OVOL1O14753 267 aa17.13■□□□□ 0.33
IRF3-228ENST00000601291 RPL11P62913 178 aaKnown RBP17.13■□□□□ 0.33
IRF3-228ENST00000601291 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa17.13■□□□□ 0.33
IRF3-228ENST00000601291 SLC50A1Q9BRV3 221 aa17.13■□□□□ 0.33
IRF3-228ENST00000601291 S100A1P23297 94 aa17.12■□□□□ 0.33
IRF3-228ENST00000601291 TCF24Q7RTU0 167 aa17.12■□□□□ 0.33
IRF3-228ENST00000601291 NIPBLQ6KC79 2804 aaeCLIP17.12■□□□□ 0.331e-8■□□□□ 8.7
IRF3-228ENST00000601291 F8W036 122 aa17.11■□□□□ 0.33
IRF3-228ENST00000601291 PF4P02776 101 aa17.11■□□□□ 0.33
IRF3-228ENST00000601291 SLC25A5P05141 298 aaKnown RBP17.11■□□□□ 0.33
IRF3-228ENST00000601291 SOHLH1Q5JUK2 328 aa17.11■□□□□ 0.33
IRF3-228ENST00000601291 C5orf17Q8NAS9 161 aa17.11■□□□□ 0.33
IRF3-228ENST00000601291 EXOC3-AS1Q8N2X6 119 aa17.11■□□□□ 0.33
IRF3-228ENST00000601291 CMTM2Q8TAZ6 248 aa17.11■□□□□ 0.33
IRF3-228ENST00000601291 LINC00052Q96N35 136 aa17.11■□□□□ 0.33
IRF3-228ENST00000601291 NRN1Q9NPD7 142 aa17.11■□□□□ 0.33
IRF3-228ENST00000601291 ZNF331Q9NQX6 463 aaPredicted RBP17.11■□□□□ 0.33
IRF3-228ENST00000601291 SCO2A0A1W2PP80 73 aa17.1■□□□□ 0.33
IRF3-228ENST00000601291 CSN3P07498 182 aa17.1■□□□□ 0.33
IRF3-228ENST00000601291 TMEM158Q8WZ71 300 aa17.1■□□□□ 0.33
IRF3-228ENST00000601291 C11orf52Q96A22 123 aa17.1■□□□□ 0.33
IRF3-228ENST00000601291 SEC11CQ9BY50 192 aa17.1■□□□□ 0.33
IRF3-228ENST00000601291 JMJD1CQ15652 2540 aa17.09■□□□□ 0.33
IRF3-228ENST00000601291 DYNLRB2Q8TF09 96 aa17.09■□□□□ 0.33
IRF3-228ENST00000601291 HIST1H2BAQ96A08 127 aa17.09■□□□□ 0.33
IRF3-228ENST00000601291 MLXQ9UH92 298 aa17.09■□□□□ 0.33
IRF3-228ENST00000601291 ADCYAP1P18509 176 aa17.08■□□□□ 0.32
IRF3-228ENST00000601291 SAMD13Q5VXD3 122 aa17.08■□□□□ 0.32
IRF3-228ENST00000601291 FAM90A2PQ658T7 463 aa17.08■□□□□ 0.32
IRF3-228ENST00000601291 ADAMTSL5Q6ZMM2 481 aa17.08■□□□□ 0.32
IRF3-228ENST00000601291 RPUSD4Q96CM3 377 aaKnown RBP17.08■□□□□ 0.32
IRF3-228ENST00000601291 EPDR1Q9UM22 224 aa17.08■□□□□ 0.32
IRF3-228ENST00000601291 C16orf92Q96LL3 132 aa17.07■□□□□ 0.32
IRF3-228ENST00000601291 CLEC5AQ9NY25 188 aa17.07■□□□□ 0.32
IRF3-228ENST00000601291 RPH3ALQ9UNE2 315 aa17.07■□□□□ 0.32
IRF3-228ENST00000601291 SETD2Q9BYW2 2564 aaPredicted RBP17.07■□□□□ 0.32
IRF3-228ENST00000601291 IGKV3-7A0A075B6H7 116 aa17.06■□□□□ 0.32
IRF3-228ENST00000601291 PEX7O00628 323 aa17.06■□□□□ 0.32
IRF3-228ENST00000601291 CSN1S1P47710 185 aa17.06■□□□□ 0.32
IRF3-228ENST00000601291 ZNF674Q2M3X9 581 aa17.06■□□□□ 0.32
IRF3-228ENST00000601291 ATG101Q9BSB4 218 aa17.06■□□□□ 0.32
IRF3-228ENST00000601291 PARLQ9H300 379 aa17.06■□□□□ 0.32
IRF3-228ENST00000601291 SIGLEC8Q9NYZ4 499 aa17.06■□□□□ 0.32
IRF3-228ENST00000601291 SELENOKQ9Y6D0 94 aa17.06■□□□□ 0.32
IRF3-228ENST00000601291 GNG5P63218 68 aa17.06■□□□□ 0.32
IRF3-228ENST00000601291 FAM74A3Q4VXF1 159 aa17.06■□□□□ 0.32
IRF3-228ENST00000601291 ZNF747Q9BV97 191 aa17.06■□□□□ 0.32
IRF3-228ENST00000601291 PRELID1Q9Y255 219 aa17.06■□□□□ 0.32
IRF3-228ENST00000601291 ZNF727A8MUV8 499 aa17.05■□□□□ 0.32
IRF3-228ENST00000601291 TCRAP04437 139 aa17.05■□□□□ 0.32
IRF3-228ENST00000601291 AKR1C3P42330 323 aa17.05■□□□□ 0.32
IRF3-228ENST00000601291 C10orf91Q5T1B1 145 aa17.05■□□□□ 0.32
IRF3-228ENST00000601291 SMIM7Q9BQ49 75 aa17.05■□□□□ 0.32
IRF3-228ENST00000601291 CARHSP1Q9Y2V2 147 aaKnown RBP17.05■□□□□ 0.32
IRF3-228ENST00000601291 CNN1P51911 297 aaKnown RBP17.04■□□□□ 0.32
IRF3-228ENST00000601291 PAFAH1B2P68402 229 aa17.04■□□□□ 0.32
IRF3-228ENST00000601291 C12orf54Q6X4T0 127 aa17.04■□□□□ 0.32
IRF3-228ENST00000601291 RBPMS2Q6ZRY4 209 aaKnown RBP17.04■□□□□ 0.32
IRF3-228ENST00000601291 ARL6IP6Q8N6S5 226 aa17.04■□□□□ 0.32
IRF3-228ENST00000601291 C3orf56Q8N813 242 aa17.04■□□□□ 0.32
IRF3-228ENST00000601291 C2CD4CQ8TF44 421 aa17.04■□□□□ 0.32
IRF3-228ENST00000601291 MS4A6AQ9H2W1 248 aa17.04■□□□□ 0.32
IRF3-228ENST00000601291 K7EQM0 130 aa17.03■□□□□ 0.32
IRF3-228ENST00000601291 DNASE2O00115 360 aaPredicted RBP17.03■□□□□ 0.32
IRF3-228ENST00000601291 ISLRO14498 428 aa17.03■□□□□ 0.32
IRF3-228ENST00000601291 SOCS3O14543 225 aa17.03■□□□□ 0.32
IRF3-228ENST00000601291 IGFL4Q6B9Z1 124 aa17.03■□□□□ 0.32
IRF3-228ENST00000601291 LINC00482Q8N8I6 264 aa17.03■□□□□ 0.32
IRF3-228ENST00000601291 MRPL53Q96EL3 112 aaKnown RBP17.03■□□□□ 0.32
IRF3-228ENST00000601291 NIPSNAP3BQ9BS92 247 aa17.03■□□□□ 0.32
IRF3-228ENST00000601291 DERL1Q9BUN8 251 aa17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 71 ms