RNA–Protein interactions for RNA: ENST00000600026.5

LTBP4-227, Transcript of latent transforming growth factor beta binding protein 4, human

TSL 3

Gene LTBP4, Length 723 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LTBP4-227	ENST00000600026	HIST1H1E	P10412	219 aa	Known RBP	16.49	■□□□□ 0.23
LTBP4-227	ENST00000600026	UBE2L3	P68036	154 aa	Known RBP	16.49	■□□□□ 0.23
LTBP4-227	ENST00000600026	IFITM2	Q01629	132 aa		16.49	■□□□□ 0.23
LTBP4-227	ENST00000600026	IQCF2	Q8IXL9	164 aa		16.49	■□□□□ 0.23
LTBP4-227	ENST00000600026	OR10J4	P0C629	311 aa		16.48	■□□□□ 0.23
LTBP4-227	ENST00000600026	FGF8	P55075	233 aa	Predicted RBP	16.48	■□□□□ 0.23
LTBP4-227	ENST00000600026	GUK1	Q16774	197 aa		16.48	■□□□□ 0.23
LTBP4-227	ENST00000600026	ZNF503	Q96F45	646 aa		16.48	■□□□□ 0.23
LTBP4-227	ENST00000600026	NRN1	Q9NPD7	142 aa		16.48	■□□□□ 0.23
LTBP4-227	ENST00000600026	TMEM167B	Q9NRX6	74 aa		16.48	■□□□□ 0.23
LTBP4-227	ENST00000600026	SMAD5-AS1	Q9Y6J3	95 aa		16.48	■□□□□ 0.23
LTBP4-227	ENST00000600026	SORL1	Q92673	2214 aa		16.47	■□□□□ 0.23
LTBP4-227	ENST00000600026	IGKV3-7	A0A075B6H7	116 aa		16.47	■□□□□ 0.23
LTBP4-227	ENST00000600026		A0A087X0K7	114 aa		16.47	■□□□□ 0.23
LTBP4-227	ENST00000600026	DNASE2	O00115	360 aa	Predicted RBP	16.47	■□□□□ 0.23
LTBP4-227	ENST00000600026	TSPAN4	O14817	238 aa		16.47	■□□□□ 0.23
LTBP4-227	ENST00000600026	GCHFR	P30047	84 aa		16.47	■□□□□ 0.23
LTBP4-227	ENST00000600026	RAB14	P61106	215 aa		16.47	■□□□□ 0.23
LTBP4-227	ENST00000600026	DEFA6	Q01524	100 aa		16.47	■□□□□ 0.23
LTBP4-227	ENST00000600026	HRH4	Q9H3N8	390 aa		16.47	■□□□□ 0.23
LTBP4-227	ENST00000600026	TRAV1-1	A0A0B4J248	108 aa		16.46	■□□□□ 0.23
LTBP4-227	ENST00000600026	NBEAP1	P0C6P0	100 aa		16.46	■□□□□ 0.23
LTBP4-227	ENST00000600026	IGLC2	P0DOY2	106 aa		16.46	■□□□□ 0.23
LTBP4-227	ENST00000600026	GUCA2B	Q16661	112 aa		16.46	■□□□□ 0.23
LTBP4-227	ENST00000600026	SAMD13	Q5VXD3	122 aa		16.46	■□□□□ 0.23
LTBP4-227	ENST00000600026	GBGT1	Q8N5D6	347 aa		16.46	■□□□□ 0.23
LTBP4-227	ENST00000600026	FXYD5	Q96DB9	178 aa		16.46	■□□□□ 0.23
LTBP4-227	ENST00000600026		A0A1B0GV50	99 aa		16.45	■□□□□ 0.22
LTBP4-227	ENST00000600026	UNQ5830/PRO19650/PRO19816	Q6UY13	95 aa		16.45	■□□□□ 0.22
LTBP4-227	ENST00000600026	BLNK	Q8WV28	456 aa		16.45	■□□□□ 0.22
LTBP4-227	ENST00000600026	MS4A6A	Q9H2W1	248 aa		16.45	■□□□□ 0.22
LTBP4-227	ENST00000600026	ZNF586	Q9NXT0	402 aa		16.45	■□□□□ 0.22
LTBP4-227	ENST00000600026	TRAV2	A0A0B4J234	112 aa		16.44	■□□□□ 0.22
LTBP4-227	ENST00000600026		H3BQ15	152 aa		16.44	■□□□□ 0.22
LTBP4-227	ENST00000600026	SNRPC	P09234	159 aa	Known RBP	16.44	■□□□□ 0.22
LTBP4-227	ENST00000600026	TFPI2	P48307	235 aa		16.44	■□□□□ 0.22
LTBP4-227	ENST00000600026	PSMB3	P49720	205 aa		16.44	■□□□□ 0.22
LTBP4-227	ENST00000600026	PPT1	P50897	306 aa		16.44	■□□□□ 0.22
LTBP4-227	ENST00000600026	PDE6H	Q13956	83 aa		16.44	■□□□□ 0.22
LTBP4-227	ENST00000600026	WFDC3	Q8IUB2	231 aa		16.44	■□□□□ 0.22
LTBP4-227	ENST00000600026	SPAG8	Q99932	426 aa	Predicted RBP	16.44	■□□□□ 0.22
LTBP4-227	ENST00000600026	TMPRSS5	Q9H3S3	457 aa		16.44	■□□□□ 0.22
LTBP4-227	ENST00000600026	TRBV19	A0A075B6N1	114 aa		16.43	■□□□□ 0.22
LTBP4-227	ENST00000600026	OR4C46	A6NHA9	309 aa		16.43	■□□□□ 0.22
LTBP4-227	ENST00000600026		K7EIL1	84 aa		16.43	■□□□□ 0.22
LTBP4-227	ENST00000600026	ID1	P41134	155 aa		16.43	■□□□□ 0.22
LTBP4-227	ENST00000600026	SLC50A1	Q9BRV3	221 aa		16.43	■□□□□ 0.22
LTBP4-227	ENST00000600026		H3BTX0	84 aa		16.42	■□□□□ 0.22
LTBP4-227	ENST00000600026	ZNF253	O75346	499 aa		16.42	■□□□□ 0.22
LTBP4-227	ENST00000600026	PSG9	Q00887	426 aa		16.42	■□□□□ 0.22
LTBP4-227	ENST00000600026	SUN5	Q8TC36	379 aa		16.42	■□□□□ 0.22
LTBP4-227	ENST00000600026	C16orf92	Q96LL3	132 aa		16.42	■□□□□ 0.22
LTBP4-227	ENST00000600026	C17orf77	Q96MU5	243 aa		16.42	■□□□□ 0.22
LTBP4-227	ENST00000600026	DCANP1	Q8TF63	244 aa		16.41	■□□□□ 0.22
LTBP4-227	ENST00000600026		K7EQG2	157 aa		16.4	■□□□□ 0.22
LTBP4-227	ENST00000600026	RGS13	O14921	159 aa		16.4	■□□□□ 0.22
LTBP4-227	ENST00000600026	IFNA1	P01562	189 aa		16.4	■□□□□ 0.22
LTBP4-227	ENST00000600026	NMB	P08949	121 aa		16.4	■□□□□ 0.22
LTBP4-227	ENST00000600026	LYPD6B	Q8NI32	183 aa		16.4	■□□□□ 0.22
LTBP4-227	ENST00000600026	PCNP	Q8WW12	178 aa	Known RBP	16.4	■□□□□ 0.22
LTBP4-227	ENST00000600026	AAMDC	Q9H7C9	122 aa		16.4	■□□□□ 0.22
LTBP4-227	ENST00000600026	CLEC5A	Q9NY25	188 aa		16.4	■□□□□ 0.22
LTBP4-227	ENST00000600026	ISLR	O14498	428 aa		16.39	■□□□□ 0.21
LTBP4-227	ENST00000600026	CD7	P09564	240 aa		16.39	■□□□□ 0.21
LTBP4-227	ENST00000600026	CD81	P60033	236 aa		16.39	■□□□□ 0.21
LTBP4-227	ENST00000600026	GTSCR1	Q86UQ5	136 aa		16.39	■□□□□ 0.21
LTBP4-227	ENST00000600026	LYPD1	Q8N2G4	141 aa		16.39	■□□□□ 0.21
LTBP4-227	ENST00000600026	ZNF331	Q9NQX6	463 aa	Predicted RBP	16.39	■□□□□ 0.21
LTBP4-227	ENST00000600026	SLC17A3	O00476	420 aa		16.38	■□□□□ 0.21
LTBP4-227	ENST00000600026	SOCS3	O14543	225 aa		16.38	■□□□□ 0.21
LTBP4-227	ENST00000600026	NDUFB4	O95168	129 aa		16.38	■□□□□ 0.21
LTBP4-227	ENST00000600026	SNRPD3	P62318	126 aa	Known RBP	16.38	■□□□□ 0.21
LTBP4-227	ENST00000600026	RAN	P62826	216 aa	Known RBP	16.38	■□□□□ 0.21
LTBP4-227	ENST00000600026	CCL20	P78556	96 aa		16.38	■□□□□ 0.21
LTBP4-227	ENST00000600026	CLLU1	Q5K131	121 aa		16.38	■□□□□ 0.21
LTBP4-227	ENST00000600026		Q8N1Y9	231 aa		16.38	■□□□□ 0.21
LTBP4-227	ENST00000600026	MRAP	Q8TCY5	172 aa		16.38	■□□□□ 0.21
LTBP4-227	ENST00000600026	MANBAL	Q9NQG1	85 aa		16.38	■□□□□ 0.21
LTBP4-227	ENST00000600026	ARL2-SNX15	V9GYD0	113 aa		16.38	■□□□□ 0.21
LTBP4-227	ENST00000600026		A0A1W2PRE2	83 aa		16.37	■□□□□ 0.21
LTBP4-227	ENST00000600026	CMC4	P56277	68 aa	Predicted RBP	16.37	■□□□□ 0.21
LTBP4-227	ENST00000600026	UBE2G2	P60604	165 aa		16.37	■□□□□ 0.21
LTBP4-227	ENST00000600026		Q9H3A6	140 aa		16.37	■□□□□ 0.21
LTBP4-227	ENST00000600026	GNG13	Q9P2W3	67 aa		16.37	■□□□□ 0.21
LTBP4-227	ENST00000600026	PMS2P11	Q13670	270 aa		16.36	■□□□□ 0.21
LTBP4-227	ENST00000600026	NKX6-2	Q9C056	277 aa	Predicted RBP	16.36	■□□□□ 0.21
LTBP4-227	ENST00000600026	OTOR	Q9NRC9	128 aa		16.36	■□□□□ 0.21
LTBP4-227	ENST00000600026	PRELID1	Q9Y255	219 aa		16.36	■□□□□ 0.21
LTBP4-227	ENST00000600026	TRAV8-2	A0A0B4J237	113 aa		16.35	■□□□□ 0.21
LTBP4-227	ENST00000600026	PAGE4	O60829	102 aa		16.35	■□□□□ 0.21
LTBP4-227	ENST00000600026	TAGLN2	P37802	199 aa	Known RBP	16.35	■□□□□ 0.21
LTBP4-227	ENST00000600026	LINC00052	Q96N35	136 aa		16.35	■□□□□ 0.21
LTBP4-227	ENST00000600026	WFDC10A	Q9H1F0	79 aa		16.35	■□□□□ 0.21
LTBP4-227	ENST00000600026	PRKDC	P78527	4128 aa	Known RBP	16.34	■□□□□ 0.21
LTBP4-227	ENST00000600026	PGP	A6NDG6	321 aa		16.34	■□□□□ 0.21
LTBP4-227	ENST00000600026	FAM74A7	A6NL05	159 aa		16.34	■□□□□ 0.21
LTBP4-227	ENST00000600026	ZNF688	P0C7X2	276 aa		16.34	■□□□□ 0.21
LTBP4-227	ENST00000600026	ICAM4	Q14773	271 aa		16.34	■□□□□ 0.21
LTBP4-227	ENST00000600026	PSG3	Q16557	428 aa		16.34	■□□□□ 0.21
LTBP4-227	ENST00000600026	ODF3L2	Q3SX64	289 aa		16.34	■□□□□ 0.21

Retrieved 100 of 20,778 RNA–protein pairs in 84.5 ms