RNA–Protein interactions for RNA: ENST00000599575.5

SHKBP1-219, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 810 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-219ENST00000599575 KIR2DL5AQ8N109 375 aa12.28□□□□□ -0.44
SHKBP1-219ENST00000599575 FAM24BQ8N5W8 94 aa12.28□□□□□ -0.44
SHKBP1-219ENST00000599575 KIR2DL5BQ8NHK3 375 aa12.28□□□□□ -0.44
SHKBP1-219ENST00000599575 STOML3Q8TAV4 291 aa12.28□□□□□ -0.44
SHKBP1-219ENST00000599575 FAM167A-AS1Q96KT0 104 aa12.28□□□□□ -0.44
SHKBP1-219ENST00000599575 C17orf77Q96MU5 243 aa12.28□□□□□ -0.44
SHKBP1-219ENST00000599575 ZNF471Q9BX82 626 aaPredicted RBP12.28□□□□□ -0.44
SHKBP1-219ENST00000599575 OR51M1Q9H341 326 aa12.28□□□□□ -0.44
SHKBP1-219ENST00000599575 TRAV5A0A0B4J249 113 aa12.27□□□□□ -0.45
SHKBP1-219ENST00000599575 UMAD1C9J7I0 102 aa12.27□□□□□ -0.45
SHKBP1-219ENST00000599575 TPT1P13693 172 aaKnown RBP12.27□□□□□ -0.45
SHKBP1-219ENST00000599575 APOC4P55056 127 aa12.27□□□□□ -0.45
SHKBP1-219ENST00000599575 BAP18Q8IXM2 172 aa12.27□□□□□ -0.45
SHKBP1-219ENST00000599575 CLUHP3Q96NS8 147 aa12.27□□□□□ -0.45
SHKBP1-219ENST00000599575 SLC25A2Q9BXI2 301 aa12.27□□□□□ -0.45
SHKBP1-219ENST00000599575 SH3BGRL3Q9H299 93 aa12.27□□□□□ -0.45
SHKBP1-219ENST00000599575 ZNF331Q9NQX6 463 aaPredicted RBP12.27□□□□□ -0.45
SHKBP1-219ENST00000599575 TRBV19A0A075B6N1 114 aa12.26□□□□□ -0.45
SHKBP1-219ENST00000599575 UBE2CO00762 179 aa12.26□□□□□ -0.45
SHKBP1-219ENST00000599575 CDC34P49427 236 aaPredicted RBP12.26□□□□□ -0.45
SHKBP1-219ENST00000599575 RAB2AP61019 212 aa12.26□□□□□ -0.45
SHKBP1-219ENST00000599575 PSG9Q00887 426 aa12.26□□□□□ -0.45
SHKBP1-219ENST00000599575 AKR1C8PQ5T2L2 129 aa12.26□□□□□ -0.45
SHKBP1-219ENST00000599575 FOXI2Q6ZQN5 318 aa12.26□□□□□ -0.45
SHKBP1-219ENST00000599575 APRG1Q8IVJ8 170 aa12.26□□□□□ -0.45
SHKBP1-219ENST00000599575 STHQ8IWL8 128 aa12.26□□□□□ -0.45
SHKBP1-219ENST00000599575 RPP25LQ8N5L8 163 aaKnown RBP12.26□□□□□ -0.45
SHKBP1-219ENST00000599575 SAT2Q96F10 170 aaPredicted RBP12.26□□□□□ -0.45
SHKBP1-219ENST00000599575 PAXXQ9BUH6 204 aa12.26□□□□□ -0.45
SHKBP1-219ENST00000599575 ACTR3CQ9C0K3 210 aaPredicted RBP12.26□□□□□ -0.45
SHKBP1-219ENST00000599575 WFDC10AQ9H1F0 79 aa12.26□□□□□ -0.45
SHKBP1-219ENST00000599575 H3BQ15 152 aa12.25□□□□□ -0.45
SHKBP1-219ENST00000599575 OR7C2O60412 319 aa12.25□□□□□ -0.45
SHKBP1-219ENST00000599575 NBEAP1P0C6P0 100 aa12.25□□□□□ -0.45
SHKBP1-219ENST00000599575 SLC51BQ86UW2 128 aa12.25□□□□□ -0.45
SHKBP1-219ENST00000599575 LYPD1Q8N2G4 141 aa12.25□□□□□ -0.45
SHKBP1-219ENST00000599575 RNF141Q8WVD5 230 aa12.25□□□□□ -0.45
SHKBP1-219ENST00000599575 LINC00052Q96N35 136 aa12.25□□□□□ -0.45
SHKBP1-219ENST00000599575 CITED4Q96RK1 184 aa12.25□□□□□ -0.45
SHKBP1-219ENST00000599575 PRELID1Q9Y255 219 aa12.25□□□□□ -0.45
SHKBP1-219ENST00000599575 TRAV8-2A0A0B4J237 113 aa12.24□□□□□ -0.45
SHKBP1-219ENST00000599575 RBMY1BA6NDE4 496 aaKnown RBP12.24□□□□□ -0.45
SHKBP1-219ENST00000599575 RBMY1EA6NEQ0 496 aaKnown RBP12.24□□□□□ -0.45
SHKBP1-219ENST00000599575 RBMY1DP0C7P1 496 aaKnown RBP12.24□□□□□ -0.45
SHKBP1-219ENST00000599575 STAG3L2P0CL84 134 aa12.24□□□□□ -0.45
SHKBP1-219ENST00000599575 STAG3L3P0CL85 134 aa12.24□□□□□ -0.45
SHKBP1-219ENST00000599575 HLA-DRB4P13762 266 aa12.24□□□□□ -0.45
SHKBP1-219ENST00000599575 NUTF2P61970 127 aaKnown RBP12.24□□□□□ -0.45
SHKBP1-219ENST00000599575 PSG3Q16557 428 aa12.24□□□□□ -0.45
SHKBP1-219ENST00000599575 EBLN2Q6P2I7 272 aa12.24□□□□□ -0.45
SHKBP1-219ENST00000599575 FAM122CQ6P4D5 195 aa12.24□□□□□ -0.45
SHKBP1-219ENST00000599575 MORN3Q6PF18 240 aaPredicted RBP12.24□□□□□ -0.45
SHKBP1-219ENST00000599575 MRPL53Q96EL3 112 aaKnown RBP12.24□□□□□ -0.45
SHKBP1-219ENST00000599575 SAV1Q9H4B6 383 aaPredicted RBP12.24□□□□□ -0.45
SHKBP1-219ENST00000599575 ZNF586Q9NXT0 402 aa12.24□□□□□ -0.45
SHKBP1-219ENST00000599575 RFNGQ9Y644 331 aa12.24□□□□□ -0.45
SHKBP1-219ENST00000599575 HLA-DRB4X5D2U9 266 aa12.24□□□□□ -0.45
SHKBP1-219ENST00000599575 UBE2L3P68036 154 aaKnown RBP12.23□□□□□ -0.45
SHKBP1-219ENST00000599575 HAGHQ16775 308 aa12.23□□□□□ -0.45
SHKBP1-219ENST00000599575 DPPA3Q6W0C5 159 aa12.23□□□□□ -0.45
SHKBP1-219ENST00000599575 TRPT1Q86TN4 253 aaKnown RBP12.23□□□□□ -0.45
SHKBP1-219ENST00000599575 C9orf62Q8N4C0 152 aa12.23□□□□□ -0.45
SHKBP1-219ENST00000599575 RAB24Q969Q5 203 aa12.23□□□□□ -0.45
SHKBP1-219ENST00000599575 FXYD5Q96DB9 178 aa12.23□□□□□ -0.45
SHKBP1-219ENST00000599575 AAMDCQ9H7C9 122 aa12.23□□□□□ -0.45
SHKBP1-219ENST00000599575 CTXND1A0A1B0GTU2 59 aa12.22□□□□□ -0.45
SHKBP1-219ENST00000599575 H3BMM0 161 aa12.22□□□□□ -0.45
SHKBP1-219ENST00000599575 DUSP14O95147 198 aaKnown RBP12.22□□□□□ -0.45
SHKBP1-219ENST00000599575 CXorf1O96002 111 aa12.22□□□□□ -0.45
SHKBP1-219ENST00000599575 PYYP10082 97 aa12.22□□□□□ -0.45
SHKBP1-219ENST00000599575 RAB5CP51148 216 aa12.22□□□□□ -0.45
SHKBP1-219ENST00000599575 CD300CQ08708 224 aa12.22□□□□□ -0.45
SHKBP1-219ENST00000599575 ACTL10Q5JWF8 245 aa12.22□□□□□ -0.45
SHKBP1-219ENST00000599575 Q6ZWC4 215 aa12.22□□□□□ -0.45
SHKBP1-219ENST00000599575 CSTL1Q9H114 145 aa12.22□□□□□ -0.45
SHKBP1-219ENST00000599575 A0A0J9YX75 114 aa12.21□□□□□ -0.45
SHKBP1-219ENST00000599575 SBSPONQ8IVN8 264 aa12.21□□□□□ -0.45
SHKBP1-219ENST00000599575 ARL6IP6Q8N6S5 226 aa12.21□□□□□ -0.45
SHKBP1-219ENST00000599575 ZNF738Q8NE65 137 aa12.21□□□□□ -0.45
SHKBP1-219ENST00000599575 ZNF503Q96F45 646 aa12.21□□□□□ -0.45
SHKBP1-219ENST00000599575 SPATA25Q9BR10 227 aa12.21□□□□□ -0.45
SHKBP1-219ENST00000599575 TM2D3Q9BRN9 247 aa12.21□□□□□ -0.45
SHKBP1-219ENST00000599575 ZMAT4Q9H898 229 aa12.21□□□□□ -0.45
SHKBP1-219ENST00000599575 TMEM167BQ9NRX6 74 aa12.21□□□□□ -0.45
SHKBP1-219ENST00000599575 PRKDCP78527 4128 aaKnown RBP12.21□□□□□ -0.46
SHKBP1-219ENST00000599575 SLC17A3O00476 420 aa12.2□□□□□ -0.46
SHKBP1-219ENST00000599575 NDUFB4O95168 129 aa12.2□□□□□ -0.46
SHKBP1-219ENST00000599575 OR10J4P0C629 311 aa12.2□□□□□ -0.46
SHKBP1-219ENST00000599575 ZNF124Q15973 351 aa12.2□□□□□ -0.46
SHKBP1-219ENST00000599575 SUN5Q8TC36 379 aa12.2□□□□□ -0.46
SHKBP1-219ENST00000599575 RPUSD4Q96CM3 377 aaKnown RBP12.2□□□□□ -0.46
SHKBP1-219ENST00000599575 C20orf173Q96LM9 149 aa12.2□□□□□ -0.46
SHKBP1-219ENST00000599575 C1QTNF4Q9BXJ3 329 aa12.2□□□□□ -0.46
SHKBP1-219ENST00000599575 TP53TG1Q9Y2A0 90 aa12.2□□□□□ -0.46
SHKBP1-219ENST00000599575 KNCNA6PVL3 124 aa12.19□□□□□ -0.46
SHKBP1-219ENST00000599575 A8MTW9 85 aa12.19□□□□□ -0.46
SHKBP1-219ENST00000599575 FAM74A1Q5RGS3 127 aa12.19□□□□□ -0.46
SHKBP1-219ENST00000599575 RNF182Q8N6D2 247 aa12.19□□□□□ -0.46
SHKBP1-219ENST00000599575 BLNKQ8WV28 456 aa12.19□□□□□ -0.46
SHKBP1-219ENST00000599575 PHYHIPLQ96FC7 376 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms