RNA–Protein interactions for RNA: ENST00000597636.5

IRF3-219, Transcript of interferon regulatory factor 3, humanhuman

TSL 5

Gene IRF3, Length 2,874 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-219ENST00000597636 TMEM14CQ9P0S9 112 aa12.34□□□□□ -0.43
IRF3-219ENST00000597636 RAI1Q7Z5J4 1906 aaPredicted RBP12.34□□□□□ -0.43
IRF3-219ENST00000597636 K7EM74 188 aa12.33□□□□□ -0.44
IRF3-219ENST00000597636 TNFRSF1AP19438 455 aa12.33□□□□□ -0.44
IRF3-219ENST00000597636 CACNG7P62955 275 aa12.33□□□□□ -0.44
IRF3-219ENST00000597636 TMEM186Q96B77 213 aa12.33□□□□□ -0.44
IRF3-219ENST00000597636 RITA1Q96K30 269 aa12.33□□□□□ -0.44
IRF3-219ENST00000597636 LOC389332A0A1B0GUA5 103 aa12.33□□□□□ -0.44
IRF3-219ENST00000597636 ZNF493Q6ZR52 646 aa12.33□□□□□ -0.44
IRF3-219ENST00000597636 NPFFR1Q9GZQ6 430 aa12.33□□□□□ -0.44
IRF3-219ENST00000597636 SPCS1Q9Y6A9 102 aa12.33□□□□□ -0.44
IRF3-219ENST00000597636 PLXNB1O43157 2135 aa12.33□□□□□ -0.44
IRF3-219ENST00000597636 ZGRF1Q86YA3 2104 aa12.33□□□□□ -0.44
IRF3-219ENST00000597636 TCTAP57738 103 aa12.32□□□□□ -0.44
IRF3-219ENST00000597636 Q6AWC8 147 aa12.32□□□□□ -0.44
IRF3-219ENST00000597636 CEACAM3P40198 252 aa12.32□□□□□ -0.44
IRF3-219ENST00000597636 LYZP61626 148 aa12.32□□□□□ -0.44
IRF3-219ENST00000597636 TMEM200BQ69YZ2 307 aa12.32□□□□□ -0.44
IRF3-219ENST00000597636 ABHD17AQ96GS6 310 aa12.32□□□□□ -0.44
IRF3-219ENST00000597636 TPPP3Q9BW30 176 aa12.32□□□□□ -0.44
IRF3-219ENST00000597636 SLC25A39Q9BZJ4 359 aaPredicted RBP12.32□□□□□ -0.44
IRF3-219ENST00000597636 INSIG2Q9Y5U4 225 aa12.32□□□□□ -0.44
IRF3-219ENST00000597636 D6R8Y8 96 aa12.32□□□□□ -0.44
IRF3-219ENST00000597636 TIMM23BQ5SRD1 257 aa12.32□□□□□ -0.44
IRF3-219ENST00000597636 SMIM17P0DL12 118 aa12.31□□□□□ -0.44
IRF3-219ENST00000597636 CRIP1P50238 77 aa12.31□□□□□ -0.44
IRF3-219ENST00000597636 TMEM75Q8N9X5 138 aa12.31□□□□□ -0.44
IRF3-219ENST00000597636 ASCL2Q99929 193 aa12.31□□□□□ -0.44
IRF3-219ENST00000597636 U3KQK5 164 aa12.31□□□□□ -0.44
IRF3-219ENST00000597636 COL12A1Q99715 3063 aa12.31□□□□□ -0.44
IRF3-219ENST00000597636 APELAP0DMC3 54 aa12.31□□□□□ -0.44
IRF3-219ENST00000597636 TMEM11P17152 192 aa12.31□□□□□ -0.44
IRF3-219ENST00000597636 RBPJQ06330 500 aa12.31□□□□□ -0.44
IRF3-219ENST00000597636 SERTM2A0A1B0GWG4 89 aa12.3□□□□□ -0.44
IRF3-219ENST00000597636 PCP2Q8IVA1 136 aa12.3□□□□□ -0.44
IRF3-219ENST00000597636 LINC00311Q8N616 119 aa12.3□□□□□ -0.44
IRF3-219ENST00000597636 ZNF414Q96IQ9 312 aa12.3□□□□□ -0.44
IRF3-219ENST00000597636 PRELID3AQ96N28 172 aa12.3□□□□□ -0.44
IRF3-219ENST00000597636 PSG8Q9UQ74 426 aa12.3□□□□□ -0.44
IRF3-219ENST00000597636 MC5RP33032 325 aa12.3□□□□□ -0.44
IRF3-219ENST00000597636 RPL27AP46776 148 aaKnown RBP12.3□□□□□ -0.44
IRF3-219ENST00000597636 LGALS7P47929 136 aa12.3□□□□□ -0.44
IRF3-219ENST00000597636 HBDP02042 147 aa12.29□□□□□ -0.44
IRF3-219ENST00000597636 FABP2P12104 132 aa12.29□□□□□ -0.44
IRF3-219ENST00000597636 FAM104BQ5XKR9 115 aa12.29□□□□□ -0.44
IRF3-219ENST00000597636 PRSS57Q6UWY2 283 aa12.29□□□□□ -0.44
IRF3-219ENST00000597636 ENSAO43768 121 aaKnown RBP12.29□□□□□ -0.44
IRF3-219ENST00000597636 FCN3O75636 299 aa12.29□□□□□ -0.44
IRF3-219ENST00000597636 NMUP48645 174 aa12.29□□□□□ -0.44
IRF3-219ENST00000597636 FXYD7P58549 80 aa12.29□□□□□ -0.44
IRF3-219ENST00000597636 SEM1Q6ZVN7 128 aa12.29□□□□□ -0.44
IRF3-219ENST00000597636 ORMDL3Q8N138 153 aa12.29□□□□□ -0.44
IRF3-219ENST00000597636 TRBV19A0A075B6N1 114 aa12.28□□□□□ -0.44
IRF3-219ENST00000597636 PAX8Q06710 450 aa12.28□□□□□ -0.44
IRF3-219ENST00000597636 ZNF474Q6S9Z5 364 aaPredicted RBP12.28□□□□□ -0.44
IRF3-219ENST00000597636 C8orf31Q8N9H6 132 aa12.28□□□□□ -0.44
IRF3-219ENST00000597636 TMEM190Q8WZ59 177 aa12.28□□□□□ -0.44
IRF3-219ENST00000597636 IFI27L1Q96BM0 104 aa12.28□□□□□ -0.44
IRF3-219ENST00000597636 ROS1P08922 2347 aa12.28□□□□□ -0.44
IRF3-219ENST00000597636 K7EQM0 130 aa12.28□□□□□ -0.44
IRF3-219ENST00000597636 PSG3Q16557 428 aa12.28□□□□□ -0.44
IRF3-219ENST00000597636 AMN1Q8IY45 258 aa12.28□□□□□ -0.44
IRF3-219ENST00000597636 C17orf77Q96MU5 243 aa12.28□□□□□ -0.44
IRF3-219ENST00000597636 PLCE1Q9P212 2302 aa12.28□□□□□ -0.44
IRF3-219ENST00000597636 ABCA1O95477 2261 aa12.28□□□□□ -0.44
IRF3-219ENST00000597636 IGHV3-72A0A0B4J1Y9 119 aa12.28□□□□□ -0.44
IRF3-219ENST00000597636 TMEM213A2RRL7 107 aa12.28□□□□□ -0.44
IRF3-219ENST00000597636 C3orf36Q3SXR2 165 aa12.28□□□□□ -0.44
IRF3-219ENST00000597636 SAMD5Q5TGI4 173 aa12.28□□□□□ -0.44
IRF3-219ENST00000597636 NGBQ9NPG2 151 aa12.28□□□□□ -0.44
IRF3-219ENST00000597636 CCL8P80075 99 aa12.27□□□□□ -0.45
IRF3-219ENST00000597636 CLEC2AQ6UVW9 174 aa12.27□□□□□ -0.45
IRF3-219ENST00000597636 LYZL1Q6UWQ5 148 aa12.27□□□□□ -0.45
IRF3-219ENST00000597636 F11RQ9Y624 299 aaKnown RBP12.27□□□□□ -0.45
IRF3-219ENST00000597636 SMIM13P0DJ93 91 aa12.27□□□□□ -0.45
IRF3-219ENST00000597636 PRB4P10163 310 aaPredicted RBP12.27□□□□□ -0.45
IRF3-219ENST00000597636 SIGLEC15Q6ZMC9 328 aa12.27□□□□□ -0.45
IRF3-219ENST00000597636 MBD3L4A6NDZ8 208 aaPredicted RBP12.26□□□□□ -0.45
IRF3-219ENST00000597636 MBD3L3A6NE82 208 aaPredicted RBP12.26□□□□□ -0.45
IRF3-219ENST00000597636 MBD3L5A6NJ08 208 aaPredicted RBP12.26□□□□□ -0.45
IRF3-219ENST00000597636 NDUFS7O75251 213 aa12.26□□□□□ -0.45
IRF3-219ENST00000597636 CT45A10P0DMU9 189 aa12.26□□□□□ -0.45
IRF3-219ENST00000597636 MRPL51Q4U2R6 128 aaKnown RBP12.26□□□□□ -0.45
IRF3-219ENST00000597636 SAMD13Q5VXD3 122 aa12.26□□□□□ -0.45
IRF3-219ENST00000597636 MBD3L2Q8NHZ7 208 aaPredicted RBP12.26□□□□□ -0.45
IRF3-219ENST00000597636 TMEM133Q9H2Q1 129 aa12.26□□□□□ -0.45
IRF3-219ENST00000597636 RPL24P83731 157 aaKnown RBP12.25□□□□□ -0.45
IRF3-219ENST00000597636 LYPD1Q8N2G4 141 aa12.25□□□□□ -0.45
IRF3-219ENST00000597636 RASL11BQ9BPW5 248 aa12.25□□□□□ -0.45
IRF3-219ENST00000597636 DKK2Q9UBU2 259 aa12.25□□□□□ -0.45
IRF3-219ENST00000597636 TM4SF20Q53R12 229 aa12.25□□□□□ -0.45
IRF3-219ENST00000597636 SHANK2-AS3Q9BTD1 123 aa12.25□□□□□ -0.45
IRF3-219ENST00000597636 TRAV17A0A0B4J275 112 aa12.24□□□□□ -0.45
IRF3-219ENST00000597636 TEX48A0A1B0GUV7 120 aa12.24□□□□□ -0.45
IRF3-219ENST00000597636 TMEM189A5PLL7 270 aa12.24□□□□□ -0.45
IRF3-219ENST00000597636 RBP4P02753 201 aa12.24□□□□□ -0.45
IRF3-219ENST00000597636 CRYGBP07316 175 aa12.24□□□□□ -0.45
IRF3-219ENST00000597636 CNTFRP26992 372 aa12.24□□□□□ -0.45
IRF3-219ENST00000597636 PIFOQ8TCI5 191 aa12.24□□□□□ -0.45
IRF3-219ENST00000597636 C8orf49Q96NF6 230 aa12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 75.4 ms