RNA–Protein interactions for RNA: ENST00000593074.5

CLIP3-206, Transcript of CAP-Gly domain containing linker protein 3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CLIP3, Length 2,080 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP3-206ENST00000593074 GFRA4Q9GZZ7 299 aa15.32■□□□□ 0.04
CLIP3-206ENST00000593074 ZFP30Q9Y2G7 519 aa15.32■□□□□ 0.04
CLIP3-206ENST00000593074 SPG11Q96JI7 2443 aa15.32■□□□□ 0.04
CLIP3-206ENST00000593074 SH2D7A6NKC9 451 aaPredicted RBP15.31■□□□□ 0.04
CLIP3-206ENST00000593074 F2Z2F3 143 aa15.31■□□□□ 0.04
CLIP3-206ENST00000593074 IGHV4-38-2P0DP08 117 aa15.31■□□□□ 0.04
CLIP3-206ENST00000593074 GPR183P32249 361 aa15.31■□□□□ 0.04
CLIP3-206ENST00000593074 SLAQ13239 276 aa15.31■□□□□ 0.04
CLIP3-206ENST00000593074 KIAA1644Q3SXP7 199 aa15.31■□□□□ 0.04
CLIP3-206ENST00000593074 C16orf54Q6UWD8 224 aa15.31■□□□□ 0.04
CLIP3-206ENST00000593074 BAGE3Q86Y29 109 aa15.31■□□□□ 0.04
CLIP3-206ENST00000593074 DAZAP1Q96EP5 407 aaKnown RBP15.31■□□□□ 0.04
CLIP3-206ENST00000593074 TPPP2P59282 170 aa15.31■□□□□ 0.04
CLIP3-206ENST00000593074 PAFAH1B2P68402 229 aa15.31■□□□□ 0.04
CLIP3-206ENST00000593074 GDF5OSQ5U4N7 250 aa15.31■□□□□ 0.04
CLIP3-206ENST00000593074 Q71RC1 249 aaPredicted RBP15.31■□□□□ 0.04
CLIP3-206ENST00000593074 TMEM219Q86XT9 240 aa15.31■□□□□ 0.04
CLIP3-206ENST00000593074 OR4B1Q8NGF8 309 aa15.31■□□□□ 0.04
CLIP3-206ENST00000593074 GTSF1Q8WW33 167 aa15.31■□□□□ 0.04
CLIP3-206ENST00000593074 AAMDCQ9H7C9 122 aa15.31■□□□□ 0.04
CLIP3-206ENST00000593074 HIF1ANQ9NWT6 349 aa15.31■□□□□ 0.04
CLIP3-206ENST00000593074 FAM231BA6NCW3 169 aa15.3■□□□□ 0.04
CLIP3-206ENST00000593074 M0R3E3 92 aa15.3■□□□□ 0.04
CLIP3-206ENST00000593074 S100A7P31151 101 aa15.3■□□□□ 0.04
CLIP3-206ENST00000593074 CRIP2P52943 208 aaPredicted RBP15.3■□□□□ 0.04
CLIP3-206ENST00000593074 C19orf54Q5BKX5 351 aa15.3■□□□□ 0.04
CLIP3-206ENST00000593074 CCDC140Q96MF4 163 aa15.3■□□□□ 0.04
CLIP3-206ENST00000593074 SOX21Q9Y651 276 aaPredicted RBP15.3■□□□□ 0.04
CLIP3-206ENST00000593074 ZNF785A8K8V0 405 aa15.29■□□□□ 0.04
CLIP3-206ENST00000593074 COL8A1P27658 744 aa15.29■□□□□ 0.04
CLIP3-206ENST00000593074 SRIP30626 198 aa15.29■□□□□ 0.04
CLIP3-206ENST00000593074 PSG9Q00887 426 aa15.29■□□□□ 0.04
CLIP3-206ENST00000593074 TCF24Q7RTU0 167 aa15.29■□□□□ 0.04
CLIP3-206ENST00000593074 ZC2HC1AQ96GY0 325 aa15.29■□□□□ 0.04
CLIP3-206ENST00000593074 ZFAND3Q9H8U3 227 aa15.29■□□□□ 0.04
CLIP3-206ENST00000593074 PSG8Q9UQ74 426 aa15.29■□□□□ 0.04
CLIP3-206ENST00000593074 VPS13CQ709C8 3753 aa15.29■□□□□ 0.04
CLIP3-206ENST00000593074 SERTM2A0A1B0GWG4 89 aa15.29■□□□□ 0.04
CLIP3-206ENST00000593074 ARL6IP6Q8N6S5 226 aa15.29■□□□□ 0.04
CLIP3-206ENST00000593074 TRAV20A0A0B4J274 112 aa15.28■□□□□ 0.04
CLIP3-206ENST00000593074 ZNF253O75346 499 aa15.28■□□□□ 0.04
CLIP3-206ENST00000593074 TOMM20LQ6UXN7 152 aa15.28■□□□□ 0.04
CLIP3-206ENST00000593074 MS4A10Q96PG2 267 aa15.28■□□□□ 0.04
CLIP3-206ENST00000593074 CLEC3BP05452 202 aa15.28■□□□□ 0.04
CLIP3-206ENST00000593074 GATA3P23771 443 aa15.28■□□□□ 0.04
CLIP3-206ENST00000593074 PKIAP61925 76 aa15.28■□□□□ 0.04
CLIP3-206ENST00000593074 IQCJQ1A5X6 159 aa15.28■□□□□ 0.04
CLIP3-206ENST00000593074 TRBV7-1A0A0A6YYK4 115 aa15.27■□□□□ 0.03
CLIP3-206ENST00000593074 HBBP68871 147 aa15.27■□□□□ 0.03
CLIP3-206ENST00000593074 RBPMS2Q6ZRY4 209 aaKnown RBP15.27■□□□□ 0.03
CLIP3-206ENST00000593074 EEF1AKMT3Q96AZ1 226 aa15.27■□□□□ 0.03
CLIP3-206ENST00000593074 SMAD5-AS1Q9Y6J3 95 aa15.27■□□□□ 0.03
CLIP3-206ENST00000593074 TRAV41A0A0B4J266 112 aa15.26■□□□□ 0.03
CLIP3-206ENST00000593074 IGHV3-35A0A0C4DH35 117 aa15.26■□□□□ 0.03
CLIP3-206ENST00000593074 CSN1S1P47710 185 aa15.26■□□□□ 0.03
CLIP3-206ENST00000593074 NOL4LQ96MY1 436 aaPredicted RBP15.26■□□□□ 0.03
CLIP3-206ENST00000593074 RCHY1Q96PM5 261 aa15.26■□□□□ 0.03
CLIP3-206ENST00000593074 RAB9AP51151 201 aa15.25■□□□□ 0.03
CLIP3-206ENST00000593074 CLEC19AQ6UXS0 136 aa15.25■□□□□ 0.03
CLIP3-206ENST00000593074 Q6ZWC4 215 aa15.25■□□□□ 0.03
CLIP3-206ENST00000593074 LINC01356Q8N9X3 169 aa15.25■□□□□ 0.03
CLIP3-206ENST00000593074 OR2D3Q8NGH3 330 aa15.25■□□□□ 0.03
CLIP3-206ENST00000593074 KCNS1Q96KK3 526 aa15.25■□□□□ 0.03
CLIP3-206ENST00000593074 ATP6V0BQ99437 205 aa15.25■□□□□ 0.03
CLIP3-206ENST00000593074 FAM208BQ5VWN6 2430 aa15.25■□□□□ 0.03
CLIP3-206ENST00000593074 UBR5O95071 2799 aaPredicted RBP15.25■□□□□ 0.03
CLIP3-206ENST00000593074 IGHV3OR16-8A0A075B7F1 116 aa15.24■□□□□ 0.03
CLIP3-206ENST00000593074 TSTD3H0UI37 97 aa15.24■□□□□ 0.03
CLIP3-206ENST00000593074 CAMPP49913 170 aa15.24■□□□□ 0.03
CLIP3-206ENST00000593074 FOXA3P55318 350 aaPredicted RBP15.24■□□□□ 0.03
CLIP3-206ENST00000593074 C9orf152Q5JTZ5 239 aa15.24■□□□□ 0.03
CLIP3-206ENST00000593074 PGLYRP4Q96LB8 373 aa15.24■□□□□ 0.03
CLIP3-206ENST00000593074 EPG5Q9HCE0 2579 aa15.24■□□□□ 0.03
CLIP3-206ENST00000593074 CLPSL1A2RUU4 121 aa15.24■□□□□ 0.03
CLIP3-206ENST00000593074 AVPP01185 164 aa15.24■□□□□ 0.03
CLIP3-206ENST00000593074 C18orf32Q8TCD1 76 aa15.24■□□□□ 0.03
CLIP3-206ENST00000593074 SSBP4Q9BWG4 385 aaPredicted RBP15.24■□□□□ 0.03
CLIP3-206ENST00000593074 SAMD10Q9BYL1 202 aa15.24■□□□□ 0.03
CLIP3-206ENST00000593074 A0A087X0K7 114 aa15.23■□□□□ 0.03
CLIP3-206ENST00000593074 FAM223BA6NKX1 122 aa15.23■□□□□ 0.03
CLIP3-206ENST00000593074 BUB3O43684 328 aa15.23■□□□□ 0.03
CLIP3-206ENST00000593074 FAM223AQ8IWN6 122 aa15.23■□□□□ 0.03
CLIP3-206ENST00000593074 A8MWP6 167 aa15.23■□□□□ 0.03
CLIP3-206ENST00000593074 H3BUX3 64 aa15.23■□□□□ 0.03
CLIP3-206ENST00000593074 PRB4P10163 310 aaPredicted RBP15.23■□□□□ 0.03
CLIP3-206ENST00000593074 CRIP1P50238 77 aa15.23■□□□□ 0.03
CLIP3-206ENST00000593074 KLF5Q13887 457 aaPredicted RBP15.23■□□□□ 0.03
CLIP3-206ENST00000593074 LY6EQ16553 131 aa15.23■□□□□ 0.03
CLIP3-206ENST00000593074 COX8CQ7Z4L0 72 aa15.23■□□□□ 0.03
CLIP3-206ENST00000593074 ASCL2Q99929 193 aa15.23■□□□□ 0.03
CLIP3-206ENST00000593074 NAGKQ9UJ70 344 aa15.23■□□□□ 0.03
CLIP3-206ENST00000593074 FBLL1A6NHQ2 334 aaKnown RBP15.22■□□□□ 0.03
CLIP3-206ENST00000593074 IGHG4P01861 327 aa15.22■□□□□ 0.03
CLIP3-206ENST00000593074 APOHP02749 345 aaPredicted RBP15.22■□□□□ 0.03
CLIP3-206ENST00000593074 IGF1P05019 195 aa15.22■□□□□ 0.03
CLIP3-206ENST00000593074 GPX1P07203 203 aa15.22■□□□□ 0.03
CLIP3-206ENST00000593074 ATP5G2Q06055 141 aa15.22■□□□□ 0.03
CLIP3-206ENST00000593074 ZNF664Q8N3J9 261 aa15.22■□□□□ 0.03
CLIP3-206ENST00000593074 ALKBH7Q9BT30 221 aaPredicted RBP15.22■□□□□ 0.03
CLIP3-206ENST00000593074 UTP20O75691 2785 aaKnown RBP15.22■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms