RNA–Protein interactions for RNA: ENST00000592604.5

SMARCA4-219, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 1 (best)

Gene SMARCA4, Length 2,940 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-219ENST00000592604 A0A0G2JNJ9 132 aa11.75□□□□□ -0.53
SMARCA4-219ENST00000592604 Q6AWC8 147 aa11.75□□□□□ -0.53
SMARCA4-219ENST00000592604 BPIFA4PQ86YQ2 179 aa11.75□□□□□ -0.53
SMARCA4-219ENST00000592604 Q9UFV3 132 aa11.75□□□□□ -0.53
SMARCA4-219ENST00000592604 PSG8Q9UQ74 426 aa11.75□□□□□ -0.53
SMARCA4-219ENST00000592604 SAP30O75446 220 aa11.75□□□□□ -0.53
SMARCA4-219ENST00000592604 GPR183P32249 361 aa11.75□□□□□ -0.53
SMARCA4-219ENST00000592604 CSN1S1P47710 185 aa11.75□□□□□ -0.53
SMARCA4-219ENST00000592604 SIGLEC15Q6ZMC9 328 aa11.75□□□□□ -0.53
SMARCA4-219ENST00000592604 ZNF493Q6ZR52 646 aa11.75□□□□□ -0.53
SMARCA4-219ENST00000592604 OR10AG1Q8NH19 301 aa11.75□□□□□ -0.53
SMARCA4-219ENST00000592604 ATP6V0BQ99437 205 aa11.75□□□□□ -0.53
SMARCA4-219ENST00000592604 RP1L1Q8IWN7 2480 aaPredicted RBP11.75□□□□□ -0.53
SMARCA4-219ENST00000592604 H3BRN7 92 aa11.74□□□□□ -0.53
SMARCA4-219ENST00000592604 TOX4O94842 621 aa11.74□□□□□ -0.53
SMARCA4-219ENST00000592604 RBP4P02753 201 aa11.74□□□□□ -0.53
SMARCA4-219ENST00000592604 CRIP1P50238 77 aa11.74□□□□□ -0.53
SMARCA4-219ENST00000592604 PSG3Q16557 428 aa11.74□□□□□ -0.53
SMARCA4-219ENST00000592604 SRSF8Q9BRL6 282 aaKnown RBP11.74□□□□□ -0.53
SMARCA4-219ENST00000592604 A0A087X0K7 114 aa11.74□□□□□ -0.53
SMARCA4-219ENST00000592604 H0Y8G0 127 aa11.74□□□□□ -0.53
SMARCA4-219ENST00000592604 BUB1B-PAK6H3BSN5 160 aa11.74□□□□□ -0.53
SMARCA4-219ENST00000592604 K7EQM0 130 aa11.74□□□□□ -0.53
SMARCA4-219ENST00000592604 C2orf91Q6ZV80 131 aa11.74□□□□□ -0.53
SMARCA4-219ENST00000592604 DPF1Q92782 380 aa11.74□□□□□ -0.53
SMARCA4-219ENST00000592604 C17orf77Q96MU5 243 aa11.74□□□□□ -0.53
SMARCA4-219ENST00000592604 FBXL15Q9H469 300 aa11.74□□□□□ -0.53
SMARCA4-219ENST00000592604 K7EM74 188 aa11.73□□□□□ -0.53
SMARCA4-219ENST00000592604 FA2HQ7L5A8 372 aa11.73□□□□□ -0.53
SMARCA4-219ENST00000592604 RNF5Q99942 180 aa11.73□□□□□ -0.53
SMARCA4-219ENST00000592604 ASPMQ8IZT6 3477 aa11.73□□□□□ -0.53
SMARCA4-219ENST00000592604 PRSS3P2Q8NHM4 247 aa11.73□□□□□ -0.53
SMARCA4-219ENST00000592604 BDP1A6H8Y1 2624 aa11.73□□□□□ -0.53
SMARCA4-219ENST00000592604 MRPS12O15235 138 aaKnown RBP11.73□□□□□ -0.53
SMARCA4-219ENST00000592604 AMMECR1LQ6DCA0 310 aa11.73□□□□□ -0.53
SMARCA4-219ENST00000592604 K7EIM0 57 aa11.72□□□□□ -0.53
SMARCA4-219ENST00000592604 NCR2O95944 276 aa11.72□□□□□ -0.53
SMARCA4-219ENST00000592604 HERV-K104P63124 156 aa11.72□□□□□ -0.53
SMARCA4-219ENST00000592604 RALYQ9UKM9 306 aaKnown RBP11.72□□□□□ -0.53
SMARCA4-219ENST00000592604 SMG1Q96Q15 3661 aaKnown RBP11.72□□□□□ -0.53
SMARCA4-219ENST00000592604 BOD1L1Q8NFC6 3051 aa11.72□□□□□ -0.53
SMARCA4-219ENST00000592604 BRI3O95415 125 aa11.72□□□□□ -0.53
SMARCA4-219ENST00000592604 PSG9Q00887 426 aa11.72□□□□□ -0.53
SMARCA4-219ENST00000592604 C5orf64Q2M2E5 130 aa11.72□□□□□ -0.53
SMARCA4-219ENST00000592604 ZNF491Q8N8L2 437 aa11.72□□□□□ -0.53
SMARCA4-219ENST00000592604 ZNF414Q96IQ9 312 aa11.72□□□□□ -0.53
SMARCA4-219ENST00000592604 PGPEP1Q9NXJ5 209 aa11.72□□□□□ -0.53
SMARCA4-219ENST00000592604 JKAMPQ9P055 326 aa11.72□□□□□ -0.53
SMARCA4-219ENST00000592604 U3KQK5 164 aa11.72□□□□□ -0.53
SMARCA4-219ENST00000592604 PKDREJQ9NTG1 2253 aa11.71□□□□□ -0.53
SMARCA4-219ENST00000592604 A0A096LNJ9 63 aa11.71□□□□□ -0.53
SMARCA4-219ENST00000592604 PPIAL4GP0DN37 164 aa11.71□□□□□ -0.53
SMARCA4-219ENST00000592604 DLX1P56177 255 aa11.71□□□□□ -0.53
SMARCA4-219ENST00000592604 CITED1Q99966 193 aa11.71□□□□□ -0.53
SMARCA4-219ENST00000592604 TIMM8BQ9Y5J9 83 aaPredicted RBP11.71□□□□□ -0.53
SMARCA4-219ENST00000592604 OR1N2Q8NGR9 330 aa11.71□□□□□ -0.54
SMARCA4-219ENST00000592604 DYNLRB1Q9NP97 96 aa11.71□□□□□ -0.54
SMARCA4-219ENST00000592604 PEF1Q9UBV8 284 aaKnown RBP11.71□□□□□ -0.54
SMARCA4-219ENST00000592604 FGF6P10767 208 aa11.7□□□□□ -0.54
SMARCA4-219ENST00000592604 SEC11AP67812 179 aa11.7□□□□□ -0.54
SMARCA4-219ENST00000592604 ZGRF1Q86YA3 2104 aa11.7□□□□□ -0.54
SMARCA4-219ENST00000592604 IFI27P40305 119 aaPredicted RBP11.7□□□□□ -0.54
SMARCA4-219ENST00000592604 FOXE3Q13461 319 aa11.7□□□□□ -0.54
SMARCA4-219ENST00000592604 ASCL2Q99929 193 aa11.7□□□□□ -0.54
SMARCA4-219ENST00000592604 TRAV8-6A0A0B4J262 113 aa11.7□□□□□ -0.54
SMARCA4-219ENST00000592604 FAM106CPP0CH98 169 aa11.7□□□□□ -0.54
SMARCA4-219ENST00000592604 FAM106AQ4KMX7 169 aa11.7□□□□□ -0.54
SMARCA4-219ENST00000592604 PIP4P2Q8N4L2 257 aa11.7□□□□□ -0.54
SMARCA4-219ENST00000592604 RNF125Q96EQ8 232 aa11.7□□□□□ -0.54
SMARCA4-219ENST00000592604 PPIAL4CA0A0B4J2A2 164 aa11.69□□□□□ -0.54
SMARCA4-219ENST00000592604 WI2-2373I1.2A0A1W2PRP0 233 aa11.69□□□□□ -0.54
SMARCA4-219ENST00000592604 SHISA9B4DS77 424 aa11.69□□□□□ -0.54
SMARCA4-219ENST00000592604 E7EQL1 145 aa11.69□□□□□ -0.54
SMARCA4-219ENST00000592604 LY6LH3BQJ8 138 aa11.69□□□□□ -0.54
SMARCA4-219ENST00000592604 PRRG2O14669 202 aa11.69□□□□□ -0.54
SMARCA4-219ENST00000592604 TMEM97Q5BJF2 176 aa11.69□□□□□ -0.54
SMARCA4-219ENST00000592604 RPEQ96AT9 228 aa11.69□□□□□ -0.54
SMARCA4-219ENST00000592604 SIGLEC8Q9NYZ4 499 aa11.69□□□□□ -0.54
SMARCA4-219ENST00000592604 PDE6HQ13956 83 aa11.69□□□□□ -0.54
SMARCA4-219ENST00000592604 LGALS9BQ3B8N2 356 aa11.69□□□□□ -0.54
SMARCA4-219ENST00000592604 FAM104BQ5XKR9 115 aa11.69□□□□□ -0.54
SMARCA4-219ENST00000592604 LGALS9CQ6DKI2 356 aa11.69□□□□□ -0.54
SMARCA4-219ENST00000592604 CT45A10P0DMU9 189 aa11.68□□□□□ -0.54
SMARCA4-219ENST00000592604 PRB3Q04118 309 aaPredicted RBP11.68□□□□□ -0.54
SMARCA4-219ENST00000592604 LOXL1Q08397 574 aaPredicted RBP11.68□□□□□ -0.54
SMARCA4-219ENST00000592604 C8orf49Q96NF6 230 aa11.68□□□□□ -0.54
SMARCA4-219ENST00000592604 OTOGLQ3ZCN5 2332 aa11.68□□□□□ -0.54
SMARCA4-219ENST00000592604 D6R8Y8 96 aa11.68□□□□□ -0.54
SMARCA4-219ENST00000592604 M0R3E3 92 aa11.68□□□□□ -0.54
SMARCA4-219ENST00000592604 CKS1BP61024 79 aa11.68□□□□□ -0.54
SMARCA4-219ENST00000592604 LYZL1Q6UWQ5 148 aa11.68□□□□□ -0.54
SMARCA4-219ENST00000592604 COX8CQ7Z4L0 72 aa11.68□□□□□ -0.54
SMARCA4-219ENST00000592604 ABHD17AQ96GS6 310 aa11.68□□□□□ -0.54
SMARCA4-219ENST00000592604 CACNA1HO95180 2353 aa11.67□□□□□ -0.54
SMARCA4-219ENST00000592604 C7orf71A4D174 169 aa11.67□□□□□ -0.54
SMARCA4-219ENST00000592604 IL4P05112 153 aa11.67□□□□□ -0.54
SMARCA4-219ENST00000592604 PLGLAQ15195 96 aa11.67□□□□□ -0.54
SMARCA4-219ENST00000592604 PRELID3AQ96N28 172 aa11.67□□□□□ -0.54
SMARCA4-219ENST00000592604 TPPP3Q9BW30 176 aa11.67□□□□□ -0.54
SMARCA4-219ENST00000592604 CEP250Q9BV73 2442 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 74 ms