RNA–Protein interactions for RNA: ENST00000592412.5

CIRBP-238, Transcript of cold inducible RNA binding protein, humanhuman

TSL 4

Gene CIRBP, Length 532 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-238ENST00000592412 KIR3DS1Q14943 382 aa12.65□□□□□ -0.38
CIRBP-238ENST00000592412 LINC00299Q6ZSB3 139 aa12.65□□□□□ -0.38
CIRBP-238ENST00000592412 ACOT7LQ6ZUV0 252 aa12.65□□□□□ -0.38
CIRBP-238ENST00000592412 LINC00612Q8N6U2 182 aa12.65□□□□□ -0.38
CIRBP-238ENST00000592412 LRTM2Q8N967 370 aa12.65□□□□□ -0.38
CIRBP-238ENST00000592412 SLC25A21Q9BQT8 299 aaPredicted RBP12.65□□□□□ -0.38
CIRBP-238ENST00000592412 SHANK2-AS3Q9BTD1 123 aa12.65□□□□□ -0.38
CIRBP-238ENST00000592412 TRAV26-1A0A087WT03 109 aa12.64□□□□□ -0.39
CIRBP-238ENST00000592412 CENPXA8MT69 81 aa12.64□□□□□ -0.39
CIRBP-238ENST00000592412 WRBO00258 174 aa12.64□□□□□ -0.39
CIRBP-238ENST00000592412 SYNGR2O43760 224 aa12.64□□□□□ -0.39
CIRBP-238ENST00000592412 SLC25A6P12236 298 aa12.64□□□□□ -0.39
CIRBP-238ENST00000592412 HOXA5P20719 270 aa12.64□□□□□ -0.39
CIRBP-238ENST00000592412 UPK3BQ9BT76 320 aa12.64□□□□□ -0.39
CIRBP-238ENST00000592412 PTTG2Q9NZH5 202 aa12.64□□□□□ -0.39
CIRBP-238ENST00000592412 A0A087X0K7 114 aa12.63□□□□□ -0.39
CIRBP-238ENST00000592412 H3BP45 60 aa12.63□□□□□ -0.39
CIRBP-238ENST00000592412 RHOBP62745 196 aa12.63□□□□□ -0.39
CIRBP-238ENST00000592412 AKR1C1Q04828 323 aa12.63□□□□□ -0.39
CIRBP-238ENST00000592412 PSG3Q16557 428 aa12.63□□□□□ -0.39
CIRBP-238ENST00000592412 ESRGQ1W209 222 aa12.63□□□□□ -0.39
CIRBP-238ENST00000592412 TMEM144Q7Z5S9 345 aa12.63□□□□□ -0.39
CIRBP-238ENST00000592412 TMEM263Q8WUH6 116 aaKnown RBP12.63□□□□□ -0.39
CIRBP-238ENST00000592412 A0A0J9YY99 117 aa12.62□□□□□ -0.39
CIRBP-238ENST00000592412 MRPS12O15235 138 aaKnown RBP12.62□□□□□ -0.39
CIRBP-238ENST00000592412 RPL7P18124 248 aaKnown RBP12.62□□□□□ -0.39
CIRBP-238ENST00000592412 OR5I1Q13606 314 aa12.62□□□□□ -0.39
CIRBP-238ENST00000592412 TMEM128Q5BJH2 165 aa12.62□□□□□ -0.39
CIRBP-238ENST00000592412 TTC32Q5I0X7 151 aa12.62□□□□□ -0.39
CIRBP-238ENST00000592412 SPANXN5Q5MJ07 72 aa12.62□□□□□ -0.39
CIRBP-238ENST00000592412 ZNF493Q6ZR52 646 aa12.62□□□□□ -0.39
CIRBP-238ENST00000592412 CYP2G1PQ6ZSU1 146 aa12.62□□□□□ -0.39
CIRBP-238ENST00000592412 RXFP4Q8TDU9 374 aa12.62□□□□□ -0.39
CIRBP-238ENST00000592412 S100ZQ8WXG8 99 aa12.62□□□□□ -0.39
CIRBP-238ENST00000592412 GNPNAT1Q96EK6 184 aaPredicted RBP12.62□□□□□ -0.39
CIRBP-238ENST00000592412 ZNF503Q96F45 646 aa12.62□□□□□ -0.39
CIRBP-238ENST00000592412 CIB3Q96Q77 187 aaPredicted RBP12.62□□□□□ -0.39
CIRBP-238ENST00000592412 SRRM2Q9UQ35 2752 aaKnown RBP12.61□□□□□ -0.39
CIRBP-238ENST00000592412 MED6O75586 246 aa12.61□□□□□ -0.39
CIRBP-238ENST00000592412 M6PRP20645 277 aa12.61□□□□□ -0.39
CIRBP-238ENST00000592412 CDKN1BP46527 198 aa12.61□□□□□ -0.39
CIRBP-238ENST00000592412 PLP1P60201 277 aa12.61□□□□□ -0.39
CIRBP-238ENST00000592412 DLK1P80370 383 aa12.61□□□□□ -0.39
CIRBP-238ENST00000592412 PARD6GQ9BYG4 376 aaPredicted RBP12.61□□□□□ -0.39
CIRBP-238ENST00000592412 HIGD1AQ9Y241 93 aa12.61□□□□□ -0.39
CIRBP-238ENST00000592412 A0A1W2PPQ1 181 aa12.6□□□□□ -0.39
CIRBP-238ENST00000592412 PMS2P5A8MQ11 134 aa12.6□□□□□ -0.39
CIRBP-238ENST00000592412 NDUFB6O95139 128 aa12.6□□□□□ -0.39
CIRBP-238ENST00000592412 VAMP1P23763 118 aa12.6□□□□□ -0.39
CIRBP-238ENST00000592412 RPP30P78346 268 aaKnown RBP12.6□□□□□ -0.39
CIRBP-238ENST00000592412 PATE2Q6UY27 113 aa12.6□□□□□ -0.39
CIRBP-238ENST00000592412 Q6ZRN7 208 aaPredicted RBP12.6□□□□□ -0.39
CIRBP-238ENST00000592412 RPUSD4Q96CM3 377 aaKnown RBP12.6□□□□□ -0.39
CIRBP-238ENST00000592412 CCDC32Q9BV29 185 aa12.6□□□□□ -0.39
CIRBP-238ENST00000592412 MRPS16Q9Y3D3 137 aaKnown RBP12.6□□□□□ -0.39
CIRBP-238ENST00000592412 H7BYZ3 331 aa12.59□□□□□ -0.39
CIRBP-238ENST00000592412 HYPMO75409 117 aa12.59□□□□□ -0.39
CIRBP-238ENST00000592412 IL5P05113 134 aa12.59□□□□□ -0.39
CIRBP-238ENST00000592412 LINC00869P0C866 280 aa12.59□□□□□ -0.39
CIRBP-238ENST00000592412 S100A7P31151 101 aa12.59□□□□□ -0.39
CIRBP-238ENST00000592412 RAP2BP61225 183 aa12.59□□□□□ -0.39
CIRBP-238ENST00000592412 OR10J6PQ8NGY7 276 aa12.59□□□□□ -0.39
CIRBP-238ENST00000592412 PPP1R14DQ9NXH3 145 aa12.59□□□□□ -0.39
CIRBP-238ENST00000592412 ZNF586Q9NXT0 402 aa12.59□□□□□ -0.39
CIRBP-238ENST00000592412 STRAPQ9Y3F4 350 aaKnown RBP12.59□□□□□ -0.39
CIRBP-238ENST00000592412 PIGBOS1A0A0B4J2F0 54 aa12.58□□□□□ -0.4
CIRBP-238ENST00000592412 PLA2G10O15496 165 aa12.58□□□□□ -0.4
CIRBP-238ENST00000592412 CCNKO75909 580 aa12.58□□□□□ -0.4
CIRBP-238ENST00000592412 HOXB5P09067 269 aa12.58□□□□□ -0.4
CIRBP-238ENST00000592412 BTCP35070 178 aa12.58□□□□□ -0.4
CIRBP-238ENST00000592412 PPP1R1AQ13522 171 aa12.58□□□□□ -0.4
CIRBP-238ENST00000592412 GFI1BQ5VTD9 330 aa12.58□□□□□ -0.4
CIRBP-238ENST00000592412 GAGE12BA1L429 117 aa12.57□□□□□ -0.4
CIRBP-238ENST00000592412 SMCO3A2RU48 225 aa12.57□□□□□ -0.4
CIRBP-238ENST00000592412 EPM2AB3EWF7 344 aa12.57□□□□□ -0.4
CIRBP-238ENST00000592412 PRAC2D3DTV9 90 aa12.57□□□□□ -0.4
CIRBP-238ENST00000592412 LYRM1O43325 122 aa12.57□□□□□ -0.4
CIRBP-238ENST00000592412 GAGE7O76087 117 aa12.57□□□□□ -0.4
CIRBP-238ENST00000592412 SFT2D2O95562 160 aa12.57□□□□□ -0.4
CIRBP-238ENST00000592412 SNRPCP09234 159 aaKnown RBP12.57□□□□□ -0.4
CIRBP-238ENST00000592412 OR5G3P0C626 314 aa12.57□□□□□ -0.4
CIRBP-238ENST00000592412 GAGE12FP0CL80 117 aa12.57□□□□□ -0.4
CIRBP-238ENST00000592412 GAGE12GP0CL81 117 aa12.57□□□□□ -0.4
CIRBP-238ENST00000592412 GAGE12IP0CL82 117 aa12.57□□□□□ -0.4
CIRBP-238ENST00000592412 FUSP35637 526 aaKnown RBP eCLIP12.57□□□□□ -0.4
CIRBP-238ENST00000592412 LINC00315P59091 139 aa12.57□□□□□ -0.4
CIRBP-238ENST00000592412 ZNF331Q9NQX6 463 aaPredicted RBP12.57□□□□□ -0.4
CIRBP-238ENST00000592412 FLVCR2Q9UPI3 526 aa12.57□□□□□ -0.4
CIRBP-238ENST00000592412 H3BNG1 76 aa12.56□□□□□ -0.4
CIRBP-238ENST00000592412 UBE2MP61081 183 aaKnown RBP12.56□□□□□ -0.4
CIRBP-238ENST00000592412 POLR2GP62487 172 aaKnown RBP eCLIP12.56□□□□□ -0.4
CIRBP-238ENST00000592412 ID3Q02535 119 aa12.56□□□□□ -0.4
CIRBP-238ENST00000592412 ZNF846Q147U1 533 aa12.56□□□□□ -0.4
CIRBP-238ENST00000592412 ZBTB8BQ8NAP8 495 aaPredicted RBP12.56□□□□□ -0.4
CIRBP-238ENST00000592412 C20orf144Q9BQM9 153 aa12.56□□□□□ -0.4
CIRBP-238ENST00000592412 SLC17A3O00476 420 aa12.55□□□□□ -0.4
CIRBP-238ENST00000592412 XGP55808 180 aa12.55□□□□□ -0.4
CIRBP-238ENST00000592412 LRRC20Q8TCA0 184 aa12.55□□□□□ -0.4
CIRBP-238ENST00000592412 VSIG2Q96IQ7 327 aa12.55□□□□□ -0.4
CIRBP-238ENST00000592412 ARL6Q9H0F7 186 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 311 ms