RNA–Protein interactions for RNA: ENST00000588032.5

TPM4-207, Transcript of tropomyosin 4, humanhuman

TSL 3

Gene TPM4, Length 712 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-207ENST00000588032 CSNK1G2-AS1Q8NCQ2 148 aa7.37□□□□□ -1.23
TPM4-207ENST00000588032 OR4B1Q8NGF8 309 aa7.37□□□□□ -1.23
TPM4-207ENST00000588032 C20orf173Q96LM9 149 aa7.37□□□□□ -1.23
TPM4-207ENST00000588032 PARD6GQ9BYG4 376 aaPredicted RBP7.37□□□□□ -1.23
TPM4-207ENST00000588032 ZNF331Q9NQX6 463 aaPredicted RBP7.37□□□□□ -1.23
TPM4-207ENST00000588032 COL7A1Q02388 2944 aa7.37□□□□□ -1.23
TPM4-207ENST00000588032 A8MTW9 85 aa7.36□□□□□ -1.23
TPM4-207ENST00000588032 ZNF705EA8MWA4 302 aaPredicted RBP7.36□□□□□ -1.23
TPM4-207ENST00000588032 ZNF253O75346 499 aa7.36□□□□□ -1.23
TPM4-207ENST00000588032 IGLC2P0DOY2 106 aa7.36□□□□□ -1.23
TPM4-207ENST00000588032 MIFP14174 115 aa7.36□□□□□ -1.23
TPM4-207ENST00000588032 PSG3Q16557 428 aa7.36□□□□□ -1.23
TPM4-207ENST00000588032 LINC01559Q495D7 138 aa7.36□□□□□ -1.23
TPM4-207ENST00000588032 GDF5OSQ5U4N7 250 aa7.36□□□□□ -1.23
TPM4-207ENST00000588032 FAM78BQ5VT40 261 aa7.36□□□□□ -1.23
TPM4-207ENST00000588032 MORN5Q5VZ52 161 aa7.36□□□□□ -1.23
TPM4-207ENST00000588032 C11orf68Q9H3H3 251 aaKnown RBP7.36□□□□□ -1.23
TPM4-207ENST00000588032 TMEM14CQ9P0S9 112 aa7.36□□□□□ -1.23
TPM4-207ENST00000588032 XCL2Q9UBD3 114 aa7.36□□□□□ -1.23
TPM4-207ENST00000588032 TRAV5A0A0B4J249 113 aa7.35□□□□□ -1.23
TPM4-207ENST00000588032 F6UB75 175 aa7.35□□□□□ -1.23
TPM4-207ENST00000588032 IGKV3-20P01619 116 aa7.35□□□□□ -1.23
TPM4-207ENST00000588032 AMBPP02760 352 aa7.35□□□□□ -1.23
TPM4-207ENST00000588032 HIST1H1EP10412 219 aaKnown RBP7.35□□□□□ -1.23
TPM4-207ENST00000588032 ZNF266Q14584 549 aa7.35□□□□□ -1.23
TPM4-207ENST00000588032 IGFL4Q6B9Z1 124 aa7.35□□□□□ -1.23
TPM4-207ENST00000588032 ZFAND6Q6FIF0 208 aa7.35□□□□□ -1.23
TPM4-207ENST00000588032 RNF182Q8N6D2 247 aa7.35□□□□□ -1.23
TPM4-207ENST00000588032 ZNF738Q8NE65 137 aa7.35□□□□□ -1.23
TPM4-207ENST00000588032 SAT2Q96F10 170 aaPredicted RBP7.35□□□□□ -1.23
TPM4-207ENST00000588032 AQP10Q96PS8 301 aa7.35□□□□□ -1.23
TPM4-207ENST00000588032 MRPL32Q9BYC8 188 aaKnown RBP7.35□□□□□ -1.23
TPM4-207ENST00000588032 SMIM9A6NGZ8 99 aa7.34□□□□□ -1.23
TPM4-207ENST00000588032 H3BQ15 152 aa7.34□□□□□ -1.23
TPM4-207ENST00000588032 CNN1P51911 297 aaKnown RBP7.34□□□□□ -1.23
TPM4-207ENST00000588032 DEFB1P60022 68 aa7.34□□□□□ -1.23
TPM4-207ENST00000588032 PDE6HQ13956 83 aa7.34□□□□□ -1.23
TPM4-207ENST00000588032 INO80EQ8NBZ0 244 aaPredicted RBP7.34□□□□□ -1.23
TPM4-207ENST00000588032 OR8A1Q8NGG7 326 aa7.34□□□□□ -1.23
TPM4-207ENST00000588032 RPUSD4Q96CM3 377 aaKnown RBP7.34□□□□□ -1.23
TPM4-207ENST00000588032 NEU1Q99519 415 aa7.34□□□□□ -1.23
TPM4-207ENST00000588032 SMIM3Q9BZL3 60 aa7.34□□□□□ -1.23
TPM4-207ENST00000588032 MFFQ9GZY8 342 aa7.34□□□□□ -1.23
TPM4-207ENST00000588032 HUWE1Q7Z6Z7 4374 aaKnown RBP7.34□□□□□ -1.24
TPM4-207ENST00000588032 TRBV19A0A075B6N1 114 aa7.33□□□□□ -1.24
TPM4-207ENST00000588032 GCSAMLQ5JQS6 135 aa7.33□□□□□ -1.24
TPM4-207ENST00000588032 FFAR4Q5NUL3 377 aa7.33□□□□□ -1.24
TPM4-207ENST00000588032 AMTNQ6UX39 209 aa7.33□□□□□ -1.24
TPM4-207ENST00000588032 ZNF705AQ6ZN79 300 aaPredicted RBP7.33□□□□□ -1.24
TPM4-207ENST00000588032 Q8NAQ8 132 aa7.33□□□□□ -1.24
TPM4-207ENST00000588032 OR2T35Q8NGX2 323 aa7.33□□□□□ -1.24
TPM4-207ENST00000588032 C11orf45Q8TAV5 145 aa7.33□□□□□ -1.24
TPM4-207ENST00000588032 MRPL53Q96EL3 112 aaKnown RBP7.33□□□□□ -1.24
TPM4-207ENST00000588032 SLC35B3Q9H1N7 401 aa7.33□□□□□ -1.24
TPM4-207ENST00000588032 OR51M1Q9H341 326 aa7.33□□□□□ -1.24
TPM4-207ENST00000588032 WFDC1Q9HC57 220 aa7.33□□□□□ -1.24
TPM4-207ENST00000588032 PPP1R14DQ9NXH3 145 aa7.33□□□□□ -1.24
TPM4-207ENST00000588032 ZNF586Q9NXT0 402 aa7.33□□□□□ -1.24
TPM4-207ENST00000588032 FUT9Q9Y231 359 aa7.33□□□□□ -1.24
TPM4-207ENST00000588032 PRELID1Q9Y255 219 aa7.33□□□□□ -1.24
TPM4-207ENST00000588032 GOLT1BQ9Y3E0 138 aa7.33□□□□□ -1.24
TPM4-207ENST00000588032 TIMM9Q9Y5J7 89 aa7.33□□□□□ -1.24
TPM4-207ENST00000588032 X6R8D5 127 aa7.33□□□□□ -1.24
TPM4-207ENST00000588032 IGHV4-28A0A0C4DH34 117 aa7.32□□□□□ -1.24
TPM4-207ENST00000588032 TMEM189A5PLL7 270 aa7.32□□□□□ -1.24
TPM4-207ENST00000588032 CXorf65A6NEN9 183 aa7.32□□□□□ -1.24
TPM4-207ENST00000588032 NUPR2A6NF83 97 aa7.32□□□□□ -1.24
TPM4-207ENST00000588032 ZNF705FA8MVS1 300 aaPredicted RBP7.32□□□□□ -1.24
TPM4-207ENST00000588032 ZNF705DP0CH99 300 aaPredicted RBP7.32□□□□□ -1.24
TPM4-207ENST00000588032 ZNF705BP0CI00 300 aaPredicted RBP7.32□□□□□ -1.24
TPM4-207ENST00000588032 FXYD7P58549 80 aa7.32□□□□□ -1.24
TPM4-207ENST00000588032 TAS2R45P59539 299 aa7.32□□□□□ -1.24
TPM4-207ENST00000588032 RHOBP62745 196 aa7.32□□□□□ -1.24
TPM4-207ENST00000588032 HIST1H1AQ02539 215 aaPredicted RBP7.32□□□□□ -1.24
TPM4-207ENST00000588032 ACOT6Q3I5F7 207 aaPredicted RBP7.32□□□□□ -1.24
TPM4-207ENST00000588032 OR10J6PQ8NGY7 276 aa7.32□□□□□ -1.24
TPM4-207ENST00000588032 FAM167A-AS1Q96KT0 104 aa7.32□□□□□ -1.24
TPM4-207ENST00000588032 IGF2BP2-AS1Q96M15 143 aa7.32□□□□□ -1.24
TPM4-207ENST00000588032 SLC25A2Q9BXI2 301 aa7.32□□□□□ -1.24
TPM4-207ENST00000588032 AAMDCQ9H7C9 122 aa7.32□□□□□ -1.24
TPM4-207ENST00000588032 AGRNO00468 2067 aa7.31□□□□□ -1.24
TPM4-207ENST00000588032 H3BTX0 84 aa7.31□□□□□ -1.24
TPM4-207ENST00000588032 SLC17A3O00476 420 aa7.31□□□□□ -1.24
TPM4-207ENST00000588032 SNRPCP09234 159 aaKnown RBP7.31□□□□□ -1.24
TPM4-207ENST00000588032 NBEAP1P0C6P0 100 aa7.31□□□□□ -1.24
TPM4-207ENST00000588032 RBMY1A1P0DJD3 496 aaKnown RBP7.31□□□□□ -1.24
TPM4-207ENST00000588032 RBMY1CP0DJD4 496 aa7.31□□□□□ -1.24
TPM4-207ENST00000588032 M6PRP20645 277 aa7.31□□□□□ -1.24
TPM4-207ENST00000588032 HLA-DMBP28068 263 aa7.31□□□□□ -1.24
TPM4-207ENST00000588032 RBMY1FQ15415 496 aaKnown RBP7.31□□□□□ -1.24
TPM4-207ENST00000588032 Q5BKY6 102 aa7.31□□□□□ -1.24
TPM4-207ENST00000588032 C4orf48Q5BLP8 95 aa7.31□□□□□ -1.24
TPM4-207ENST00000588032 MIR17HGQ75NE6 70 aa7.31□□□□□ -1.24
TPM4-207ENST00000588032 RNF141Q8WVD5 230 aa7.31□□□□□ -1.24
TPM4-207ENST00000588032 PAXXQ9BUH6 204 aa7.31□□□□□ -1.24
TPM4-207ENST00000588032 TNFSF18Q9UNG2 199 aa7.31□□□□□ -1.24
TPM4-207ENST00000588032 STAB2Q8WWQ8 2551 aa7.3□□□□□ -1.24
TPM4-207ENST00000588032 FXYD6-FXYD2A0A087WZ82 144 aa7.3□□□□□ -1.24
TPM4-207ENST00000588032 BORCS7-ASMTA0A0B4J1R7 106 aa7.3□□□□□ -1.24
TPM4-207ENST00000588032 A0A1W2PPV4 95 aa7.3□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms