RNA–Protein interactions for RNA: ENST00000587470.1

VMP1-205, Transcript of vacuole membrane protein 1, humanhuman

TSL 2

Gene VMP1, Length 995 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-205ENST00000587470 SCP2D1Q9UJQ7 156 aa2.77□□□□□ -1.97
VMP1-205ENST00000587470 TBC1D24Q9ULP9 559 aa2.77□□□□□ -1.97
VMP1-205ENST00000587470 FLVCR2Q9UPI3 526 aa2.77□□□□□ -1.97
VMP1-205ENST00000587470 DNAH1Q9P2D7 4330 aa2.77□□□□□ -1.97
VMP1-205ENST00000587470 IGLV11-55A0A075B6I3 123 aa2.76□□□□□ -1.97
VMP1-205ENST00000587470 C9orf170A2RU37 121 aa2.76□□□□□ -1.97
VMP1-205ENST00000587470 NAP1L6A6NFF2 107 aa2.76□□□□□ -1.97
VMP1-205ENST00000587470 INS-IGF2F8WCM5 200 aa2.76□□□□□ -1.97
VMP1-205ENST00000587470 H3BUA1 57 aa2.76□□□□□ -1.97
VMP1-205ENST00000587470 LYRM1O43325 122 aa2.76□□□□□ -1.97
VMP1-205ENST00000587470 PITX3O75364 302 aa2.76□□□□□ -1.97
VMP1-205ENST00000587470 UPK1BO75841 260 aa2.76□□□□□ -1.97
VMP1-205ENST00000587470 SNAPC5O75971 98 aa2.76□□□□□ -1.97
VMP1-205ENST00000587470 TMEM50AO95807 157 aa2.76□□□□□ -1.97
VMP1-205ENST00000587470 TRBV12-3P01733 135 aa2.76□□□□□ -1.97
VMP1-205ENST00000587470 PRH1P02810 166 aa2.76□□□□□ -1.97
VMP1-205ENST00000587470 SERPINE2P07093 398 aa2.76□□□□□ -1.97
VMP1-205ENST00000587470 TRAPPC2P0DI81 140 aa2.76□□□□□ -1.97
VMP1-205ENST00000587470 TRAPPC2BP0DI82 140 aa2.76□□□□□ -1.97
VMP1-205ENST00000587470 AKR1C4P17516 323 aa2.76□□□□□ -1.97
VMP1-205ENST00000587470 PSMB6P28072 239 aa2.76□□□□□ -1.97
VMP1-205ENST00000587470 S100GP29377 79 aa2.76□□□□□ -1.97
VMP1-205ENST00000587470 FAUP35544 74 aaKnown RBP2.76□□□□□ -1.97
VMP1-205ENST00000587470 LEPP41159 167 aa2.76□□□□□ -1.97
VMP1-205ENST00000587470 HSPE1P61604 102 aaKnown RBP2.76□□□□□ -1.97
VMP1-205ENST00000587470 CXCL6P80162 114 aa2.76□□□□□ -1.97
VMP1-205ENST00000587470 PPP1R1AQ13522 171 aa2.76□□□□□ -1.97
VMP1-205ENST00000587470 ZNF846Q147U1 533 aa2.76□□□□□ -1.97
VMP1-205ENST00000587470 TMEM128Q5BJH2 165 aa2.76□□□□□ -1.97
VMP1-205ENST00000587470 NMSQ5H8A3 153 aa2.76□□□□□ -1.97
VMP1-205ENST00000587470 TRIQKQ629K1 86 aa2.76□□□□□ -1.97
VMP1-205ENST00000587470 LYZL2Q7Z4W2 148 aa2.76□□□□□ -1.97
VMP1-205ENST00000587470 ZNF429Q86V71 674 aa2.76□□□□□ -1.97
VMP1-205ENST00000587470 SGPP2Q8IWX5 399 aa2.76□□□□□ -1.97
VMP1-205ENST00000587470 CCDC71LQ8N9Z2 235 aa2.76□□□□□ -1.97
VMP1-205ENST00000587470 OR5B3Q8NH48 314 aa2.76□□□□□ -1.97
VMP1-205ENST00000587470 C4orf3Q8WVX3 66 aa2.76□□□□□ -1.97
VMP1-205ENST00000587470 S100ZQ8WXG8 99 aa2.76□□□□□ -1.97
VMP1-205ENST00000587470 RBPMSQ93062 196 aaKnown RBP2.76□□□□□ -1.97
VMP1-205ENST00000587470 IL22RA2Q969J5 263 aa2.76□□□□□ -1.97
VMP1-205ENST00000587470 LSM10Q969L4 123 aaKnown RBP2.76□□□□□ -1.97
VMP1-205ENST00000587470 GPR146Q96CH1 333 aa2.76□□□□□ -1.97
VMP1-205ENST00000587470 SCGB3A2Q96PL1 93 aa2.76□□□□□ -1.97
VMP1-205ENST00000587470 RNF2Q99496 336 aa2.76□□□□□ -1.97
VMP1-205ENST00000587470 C7orf50Q9BRJ6 194 aaKnown RBP2.76□□□□□ -1.97
VMP1-205ENST00000587470 PRNDQ9UKY0 176 aa2.76□□□□□ -1.97
VMP1-205ENST00000587470 C14orf166Q9Y224 244 aaKnown RBP2.76□□□□□ -1.97
VMP1-205ENST00000587470 ZNF257Q9Y2Q1 563 aa2.76□□□□□ -1.97
VMP1-205ENST00000587470 KCNIP3Q9Y2W7 256 aa2.76□□□□□ -1.97
VMP1-205ENST00000587470 CHTOPQ9Y3Y2 248 aaKnown RBP2.76□□□□□ -1.97
VMP1-205ENST00000587470 OR51B2Q9Y5P1 312 aa2.76□□□□□ -1.97
VMP1-205ENST00000587470 DYNC2H1Q8NCM8 4307 aaKnown RBP2.76□□□□□ -1.97
VMP1-205ENST00000587470 STAB2Q8WWQ8 2551 aa2.75□□□□□ -1.97
VMP1-205ENST00000587470 A0A0B4J2A0 478 aa2.75□□□□□ -1.97
VMP1-205ENST00000587470 K7EIM0 57 aa2.75□□□□□ -1.97
VMP1-205ENST00000587470 CREBL2O60519 120 aaPredicted RBP2.75□□□□□ -1.97
VMP1-205ENST00000587470 OR2J3O76001 311 aa2.75□□□□□ -1.97
VMP1-205ENST00000587470 SFT2D2O95562 160 aa2.75□□□□□ -1.97
VMP1-205ENST00000587470 IGHV3-11P01762 117 aa2.75□□□□□ -1.97
VMP1-205ENST00000587470 TRGV3P03979 118 aa2.75□□□□□ -1.97
VMP1-205ENST00000587470 TCRBP04435 133 aa2.75□□□□□ -1.97
VMP1-205ENST00000587470 REG1AP05451 166 aa2.75□□□□□ -1.97
VMP1-205ENST00000587470 LGALS1P09382 135 aaKnown RBP2.75□□□□□ -1.97
VMP1-205ENST00000587470 STAG3L3P0CL85 134 aa2.75□□□□□ -1.97
VMP1-205ENST00000587470 OR13C7P0DN81 318 aa2.75□□□□□ -1.97
VMP1-205ENST00000587470 MYCNOSP40205 109 aa2.75□□□□□ -1.97
VMP1-205ENST00000587470 RPL29P47914 159 aaKnown RBP2.75□□□□□ -1.97
VMP1-205ENST00000587470 TPPP2P59282 170 aa2.75□□□□□ -1.97
VMP1-205ENST00000587470 UBE2MP61081 183 aaKnown RBP2.75□□□□□ -1.97
VMP1-205ENST00000587470 RPL32P62910 135 aaKnown RBP2.75□□□□□ -1.97
VMP1-205ENST00000587470 RHOGP84095 191 aa2.75□□□□□ -1.97
VMP1-205ENST00000587470 PRCDQ00LT1 54 aa2.75□□□□□ -1.97
VMP1-205ENST00000587470 DEFA5Q01523 94 aa2.75□□□□□ -1.97
VMP1-205ENST00000587470 DHRS2Q13268 280 aa2.75□□□□□ -1.97
VMP1-205ENST00000587470 ASAH1Q13510 395 aa2.75□□□□□ -1.97
VMP1-205ENST00000587470 DEFB136Q30KP8 78 aa2.75□□□□□ -1.97
VMP1-205ENST00000587470 BSXQ3C1V8 233 aa2.75□□□□□ -1.97
VMP1-205ENST00000587470 IL34Q6ZMJ4 242 aa2.75□□□□□ -1.97
VMP1-205ENST00000587470 TMED4Q7Z7H5 227 aa2.75□□□□□ -1.97
VMP1-205ENST00000587470 SLC35G3Q8N808 338 aa2.75□□□□□ -1.97
VMP1-205ENST00000587470 NECAP1Q8NC96 275 aa2.75□□□□□ -1.97
VMP1-205ENST00000587470 DUSP18Q8NEJ0 188 aa2.75□□□□□ -1.97
VMP1-205ENST00000587470 OR1N2Q8NGR9 330 aa2.75□□□□□ -1.97
VMP1-205ENST00000587470 OR52E5Q8NH55 327 aa2.75□□□□□ -1.97
VMP1-205ENST00000587470 VN1R17PQ8TDU5 208 aa2.75□□□□□ -1.97
VMP1-205ENST00000587470 USMG5Q96IX5 58 aa2.75□□□□□ -1.97
VMP1-205ENST00000587470 OR5B12Q96R08 314 aa2.75□□□□□ -1.97
VMP1-205ENST00000587470 TSC22D3Q99576 134 aa2.75□□□□□ -1.97
VMP1-205ENST00000587470 COMMD5Q9GZQ3 224 aa2.75□□□□□ -1.97
VMP1-205ENST00000587470 GEMIN7Q9H840 131 aaKnown RBP2.75□□□□□ -1.97
VMP1-205ENST00000587470 CTNNBIP1Q9NSA3 81 aaPredicted RBP2.75□□□□□ -1.97
VMP1-205ENST00000587470 COA4Q9NYJ1 87 aa2.75□□□□□ -1.97
VMP1-205ENST00000587470 FKBP11Q9NYL4 201 aa2.75□□□□□ -1.97
VMP1-205ENST00000587470 SHPKQ9UHJ6 478 aa2.75□□□□□ -1.97
VMP1-205ENST00000587470 DNAH3Q8TD57 4116 aa2.74□□□□□ -1.97
VMP1-205ENST00000587470 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP2.74□□□□□ -1.97
VMP1-205ENST00000587470 A0A0G2JLM5 398 aa2.74□□□□□ -1.97
VMP1-205ENST00000587470 DUXBA0A1W2PPF3 345 aa2.74□□□□□ -1.97
VMP1-205ENST00000587470 FAM223BA6NKX1 122 aa2.74□□□□□ -1.97
VMP1-205ENST00000587470 CENPXA8MT69 81 aa2.74□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 68 ms